MELO3C031039.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031039.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr04: 34031107 .. 34034476 (-)
RNA-Seq ExpressionMELO3C031039.jh1
SyntenyMELO3C031039.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAATGATCTGGCTGAAGCTGGGCCTCATGTTAGGATCTTCAACCCAACACGACTGTACTATAAATGCTAGCTCGGGAGGTATGTCGCCTGGAATACTGGGTCTCTCTTGCTGCATTACCACATCACAGCAACAAATGGTGAGATATTTTGGAAAAGTACCACACAATATGACTGAAGAAAATTTTCTGAAATGATGTGGTGAAAAAGCCCCTTCACCTCTTTCTTTTCCTTTTGTTGACAGGAGTAATCGGGAGTCTGCCCCATAATGTTGCATTATATGCGATAATAACCAAAATAAACAAAATAGAAAGAAACGAAACTTTTGGCACCTTGAAAGCAGCCGCATACGCAGCTTGCAAATTGGACATCCCTTCAAATGGCATTCGGTTGGTCAAGAGCTCCCATAAGACAATTCCAAAGCTGTATACGTCAACTTTGTTGTTGTAATGCTTTTTCTCTCCCTGGCGCAATGTCACAGTGCTATACAACTGCAAAGACAGACATGATGGCCAATAAAATTTCATCTCCCAGAAAGTAACTGAGCAAGAGAAGCTGCATTCACAAGCCAATGAACAATAAAGTAATCCTCAGAAAACATTTCAACAAGCCATTAAAAAGCAAGATTATACATCATATTGAATATTAGGTACCACAGATTTGGAGAAGAGGGAGAGACGTGTTACTTTAAAGATGCAAAAGATTCTTACAACTTTGGGCCATTTCTACAAACTTAAAGCCCTAATTCGCATTCCTTTTATACCATGCATTTTGAAAAAATGTCCTCTCTTTTGGATAATTTTGAAAATCTCCATTTTAAAATGCTTACTAGTTACAAATCTCTGAGATGCCAATAGTTTGACCTTTATATATACACAAGTTAACAGTGCCATTCCATGAGTATCAATGAAGCACGATATAGCACATTTTTACTTGTAAGACAAATTAAATTGGCATGCATATAAGAATTGTTTATGAAAATGAAAGGGTAAATATGCAACAAGGAGGATAAAGAAGAACACCTCAGGAGCCATCCAACGGTAAGTCCCTGTTTCTGCAGTCATCATCTCAGTCACAGATTCTTCTCTAGCAAGTCCAAAGTCTGCAAGCTTCACAGACCTTTGATTTGCAGTAAGCAACAAATTATCTACATTGCAAGTCCTTTATCGATGTAAGTATTGGAACATGTCCATAAAACCAGTACATATACCTATTGATTCTAATTCGGAGTCATGCATAATAATACTACTTACATGGTTAGAAGCCCAGTAAAACAAAATACAATTGCAAGGTACAAGCAAATCCCCGTTTGAATTTGGAAACAATGATAAACAACGTCCAAATACATTAAAACGTACAGAGCAAGAGGGAGCAGTAGCCCAATTAATTAGAGTAAAAAAACATTTAAATATAATCATATTTCAAAAATTCATGCCATGGAAAAACTCATTATTTCTCAAAGTTTGCACTTCAGCAATAAATCAAATTTCAAATAGAAAAATCCATGAATTTAGAAAACAAAACATAAATTAAAGAAGATGATGGAGCAAGATGATTGAGAAATCTCCAAATATCATCTCTACACCAAAGTTGAATGTAGAATAGATTTCGCCAGTTAGAACAAATCTACCAGAGAACCTTCACGAGTTTGCAAGTTATACAACACATAATGTTCTACTAACATGTTCTCTAGTTTATAATAGCAAAGTAGAATTGGCTGAGGATACCAGGTTTCAGATCTCTATGTATAATCCCATTTGCATGTAGACAATCCATAGCACGAGCAACATCCAAAGCAAAGTTAATGGCCATCCGAGGGTCCAGCTGTTGCTTACGATTATTCATCAGATACTTCCTGAGTGACATCCCTGGTAATAGCTCTGTGACTATCACCATTAGAGGTTCTTTACAAGCTCCAATGAACTGCAAAGCAAATATCTTGCTATGTTTGGTAAAAATATAAATCATTGAATGTGACTTTAGAAGGAAGTATAAAACCACCGCTAAAAACATTTTTTTTTAAAGAATAAGTTCAATAAATGCAGGCACACTTCAACTTGATTTCCTCACCTTGACAAGATTTTCATGTTTTACTCGGGACATCATATTTACTTCACGAGCAAAACGACTTTCAAGTGCTGCTCTTTCTTCTGGAGTACTCCCTCGATGGAGAACTTTAATGGCCACAATTTGGTCCCGGTACCTTCAAAAATAACAAATAGTCTTCAGTCGCTTAACAGAGTCCAGTAGCCTCTCATAAGTGTACAACTCTAGTGTACAAGTGGAAGATGTCAAGCAAGAATTGGTGGCAAATGACAATAACTCGTTAAAAACAAATACACGCTTAATTCCATGGCATTCATGTTCAAGCTCTTGAACAGTTCAGCTAAGGTTATAATTTGTTTGCACAATTTGTTCCATGATCGAGGAAACAGAACATTTTTATTGTAGGAAGCACATACCACTTTGACTAGAGGCTCAGTGTAAGAGTCAGACACCTCCAGTTGCATTTAACCTTTATGTTTCAAATAATTCCTCAAAACAGCTATTACGTGCAGATTCCAAGAGATTTGTTTACGGAATAGATTTAAATAAAATCATATGAGATATGCAGGTTAGGTACGTATGAAATTAAACTCATACTGACAACAAGTTACCTGAATAAGGGAAATTGTTAGTGCCAATTCATTATTTTTAAACCATCAGAATGTTTAGAGTAGTGGCAAACAGAAAACAAAAATACATGGGAGAAAAGAATCACACTGACCTGCCTTCATAAACCTTTCCGTGAGCGCCCTCGCCAATCTTCGATCCAATAAATAGCAATTTTGGGTCAACAAGAAGATTATCATCGATGGTCAAGTGTTGGGCCGTTATGGATCCATTCTCGATGACTGGTTTCCGATGTGGCTTGGTCAAAACTGGGAGCTCAGTTTCCCTATCATTTACCCCTCTATTTTTCTCGTTACAACTCATACTGCAGCCTCAAATTAATCCCGAATTCCTCATACTGATACAGTGTGTACAGAGTAAACCCAGAGATAAGATGGTTGAATCAATCAGAGTTTCCTGATTTGCAATCAGTTGAAAACAGCATGGGCAGTGGGTTACGTATATGAATTATGAAGGCATCCGGAGCAGCAAAATGGTAGTAGATTCAAGCTTGCCATAAACGAAAAGAAAAAGGAGTGTTTAAGGTCCCGGGCGGGCGATGGGTTCGGAATAAAAACTAAATTAAGTGGGCAATCGAGAGAATATAGGTCCAGTATCCGGGGAGTGTGTTTAAGGGTTAAAACTTTGTTGGGAATCAGTAGTTTGAAAGTATGGACGCAGCTTTGCTTGATTTCAAAGCCTCCAAAGAAACCCTAG

mRNA sequence

ATGCGAATGATCTGGCTGAAGCTGGGCCTCATGTTAGGATCTTCAACCCAACACGACTGTACTATAAATGCTAGCTCGGGAGGAGTAATCGGGAGTCTGCCCCATAATGTTGCATTATATGCGATAATAACCAAAATAAACAAAATAGAAAGAAACGAAACTTTTGGCACCTTGAAAGCAGCCGCATACGCAGCTTGCAAATTGGACATCCCTTCAAATGGCATTCGGTTGGGTAAATATGCAACAAGGAGGATAAAGAAGAACACCTCAGGAGCCATCCAACGACAATCCATAGCACGAGCAACATCCAAAGCAAAGTTAATGGCCATCCGAGGGTCCAGCTGTTGCTTACGATTATTCATCAGATACTTCCTGAGTGACATCCCTGGTAATAGCTCTGTGACTATCACCATTAGAGGCACACTTCAACTTGATTTCCTCACCTTGACAAGATTTTCATGTTTTACTCGGGACATCATATTTACTTCACGAGCAAAACGACTTTCAAGTGCTGCTCTTTCTTCTGGAGTACTCCCTCGATGGAGAACTTTAATGGCCACAATTTGGTCCCGGCATCCGGAGCAGCAAAATGGTAGTAGATTCAAGCTTGCCATAAACGAAAAGAAAAAGGAGTGTTTAAGGTCCCGGGCGGGCGATGGGTTCGGAATAAAAACTAAATTAAGTGGGCAATCGAGAGAATATAGGTCCAGTATCCGGGGAGTGTGTTTAAGGGTTAAAACTTTGTTGGGAATCAGTAGTTTGAAAGTATGGACGCAGCTTTGCTTGATTTCAAAGCCTCCAAAGAAACCCTAG

Coding sequence (CDS)

ATGCGAATGATCTGGCTGAAGCTGGGCCTCATGTTAGGATCTTCAACCCAACACGACTGTACTATAAATGCTAGCTCGGGAGGAGTAATCGGGAGTCTGCCCCATAATGTTGCATTATATGCGATAATAACCAAAATAAACAAAATAGAAAGAAACGAAACTTTTGGCACCTTGAAAGCAGCCGCATACGCAGCTTGCAAATTGGACATCCCTTCAAATGGCATTCGGTTGGGTAAATATGCAACAAGGAGGATAAAGAAGAACACCTCAGGAGCCATCCAACGACAATCCATAGCACGAGCAACATCCAAAGCAAAGTTAATGGCCATCCGAGGGTCCAGCTGTTGCTTACGATTATTCATCAGATACTTCCTGAGTGACATCCCTGGTAATAGCTCTGTGACTATCACCATTAGAGGCACACTTCAACTTGATTTCCTCACCTTGACAAGATTTTCATGTTTTACTCGGGACATCATATTTACTTCACGAGCAAAACGACTTTCAAGTGCTGCTCTTTCTTCTGGAGTACTCCCTCGATGGAGAACTTTAATGGCCACAATTTGGTCCCGGCATCCGGAGCAGCAAAATGGTAGTAGATTCAAGCTTGCCATAAACGAAAAGAAAAAGGAGTGTTTAAGGTCCCGGGCGGGCGATGGGTTCGGAATAAAAACTAAATTAAGTGGGCAATCGAGAGAATATAGGTCCAGTATCCGGGGAGTGTGTTTAAGGGTTAAAACTTTGTTGGGAATCAGTAGTTTGAAAGTATGGACGCAGCTTTGCTTGATTTCAAAGCCTCCAAAGAAACCCTAG

Protein sequence

MRMIWLKLGLMLGSSTQHDCTINASSGGVIGSLPHNVALYAIITKINKIERNETFGTLKAAAYAACKLDIPSNGIRLGKYATRRIKKNTSGAIQRQSIARATSKAKLMAIRGSSCCLRLFIRYFLSDIPGNSSVTITIRGTLQLDFLTLTRFSCFTRDIIFTSRAKRLSSAALSSGVLPRWRTLMATIWSRHPEQQNGSRFKLAINEKKKECLRSRAGDGFGIKTKLSGQSREYRSSIRGVCLRVKTLLGISSLKVWTQLCLISKPPKKP
Homology
[Close]
BLAST of MELO3C031039.jh1 vs. NCBI nr
Match: AFK47721.1 (unknown [Lotus japonicus])

HSP 1 Score: 69.7 bits (169), Expect = 4.00e-11
Identity = 46/95 (48.42%), Postives = 55/95 (57.89%), Query Frame = 0 

Query: 95  RQSIARATSKAKLMAIRGSSCCLRLFIRYFLSDIPGNSSVTITIRGTLQLDFLTLTRFSC 154
           R SIARA S AK MA   S    R+F +Y  +  P N+SVTITI G LQ   +  T+F C
Sbjct: 7   RHSIARAISSAKPMATCVSKHLGRMFSKYLRNVPPNNNSVTITITGYLQAP-INFTKFLC 66

Query: 155 FTRDIIFTSRAKRLSSAALSSGVLPRWRTLMATIW 189
            T D I TS AKR S   +SS V P    L+AT+W
Sbjct: 67  CTLDNIATSLAKRPSLLTMSSAVSPFCTILIATVW 100

[Close]
BLAST of MELO3C031039.jh1 vs. NCBI nr
Match: KAG6551511.1 (hypothetical protein Mapa_006934 [Marchantia paleacea])

HSP 1 Score: 64.3 bits (155), Expect = 3.91e-09
Identity = 45/98 (45.92%), Postives = 53/98 (54.08%), Query Frame = 0 

Query: 95  RQSIARATSKAKLMAIRGSSCCLRLFIRYFLSDIPGNSSVTITIRGTLQLDFLTLTRFSC 154
           RQS+A A S AKL A R S+   R    Y   D+P  SSVTITI G+L       TRF C
Sbjct: 7   RQSMAWAMSNAKLTAQRKSNRLGRRLAMYLRRDLPPRSSVTITITGSLHAP-TNFTRFLC 66

Query: 155 FTRDIIFTSRAKRLSSAALSSGVLPRWRTLMATIWSRH 192
            T   + TSRA R S  A+SS V    R   AT WS++
Sbjct: 67  STLHSMATSRANRDSILAVSSTVSGGCRIFTATFWSKY 103

[Close]
BLAST of MELO3C031039.jh1 vs. NCBI nr
Match: KAB1215051.1 (hypothetical protein CJ030_MR4G018565 [Morella rubra])

HSP 1 Score: 51.6 bits (122), Expect = 1.59e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 1  MRMIWLKLGLMLGSSTQHDCTINASSG 27
          MRMIWLKLGL LGSSTQHDC + ASSG
Sbjct: 31 MRMIWLKLGLRLGSSTQHDCMMKASSG 57

[Close]
BLAST of MELO3C031039.jh1 vs. ExPASy TrEMBL
Match: I3T5C9 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.93e-11
Identity = 46/95 (48.42%), Postives = 55/95 (57.89%), Query Frame = 0 

Query: 95  RQSIARATSKAKLMAIRGSSCCLRLFIRYFLSDIPGNSSVTITIRGTLQLDFLTLTRFSC 154
           R SIARA S AK MA   S    R+F +Y  +  P N+SVTITI G LQ   +  T+F C
Sbjct: 7   RHSIARAISSAKPMATCVSKHLGRMFSKYLRNVPPNNNSVTITITGYLQAP-INFTKFLC 66

Query: 155 FTRDIIFTSRAKRLSSAALSSGVLPRWRTLMATIW 189
            T D I TS AKR S   +SS V P    L+AT+W
Sbjct: 67  CTLDNIATSLAKRPSLLTMSSAVSPFCTILIATVW 100

[Close]
BLAST of MELO3C031039.jh1 vs. ExPASy TrEMBL
Match: A0A0A9N1L8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.55e-08
Identity = 41/95 (43.16%), Postives = 50/95 (52.63%), Query Frame = 0 

Query: 95  RQSIARATSKAKLMAIRGSSCCLRLFIRYFLSDIPGNSSVTITIRGTLQLDFLTLTRFSC 154
           + SIARA SKA   A RGS    R   +Y   + P +SSVT T+ G  Q   + LTRF C
Sbjct: 7   KHSIARAMSKANPTATRGSRLLGRRLTKYLRKEPPTSSSVTTTMTGFRQAP-INLTRFLC 66

Query: 155 FTRDIIFTSRAKRLSSAALSSGVLPRWRTLMATIW 189
            T D + TS     S   +SSGV P    L+AT W
Sbjct: 67  CTLDNMVTSLKNLPSLLVMSSGVSPLCTILIATFW 100

[Close]
BLAST of MELO3C031039.jh1 vs. ExPASy TrEMBL
Match: A0A6A1VQ83 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR4G018565 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.70e-05
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 1  MRMIWLKLGLMLGSSTQHDCTINASSG 27
          MRMIWLKLGL LGSSTQHDC + ASSG
Sbjct: 31 MRMIWLKLGLRLGSSTQHDCMMKASSG 57

[Close]
BLAST of MELO3C031039.jh1 vs. ExPASy TrEMBL
Match: K4CS71 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.91e-04
Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = 0 

Query: 2  RMIWLKLGLMLGSSTQHDCTINASSGGV 29
          R+IWLKLG MLGSSTQHDC INA SG +
Sbjct: 72 RIIWLKLGRMLGSSTQHDCMINAKSGEI 99

The following BLAST results are available for this feature:
BLAST of MELO3C031039.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
AFK47721.14.00e-1148.42unknown [Lotus japonicus][more]
KAG6551511.13.91e-0945.92hypothetical protein Mapa_006934 [Marchantia paleacea][more]
KAB1215051.11.59e-0485.19hypothetical protein CJ030_MR4G018565 [Morella rubra][more]
BLAST of MELO3C031039.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031039.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
I3T5C91.93e-1148.42Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
A0A0A9N1L82.55e-0843.16Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A6A1VQ837.70e-0585.19Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR4G018565 PE=4 SV=1[more]
K4CS711.91e-0478.57Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1[more]
BLAST of MELO3C031039.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031039.jh1.t1MELO3C031039.jh1.t1mRNA