MELO3C031035 (gene) Melon (DHL92) v4

Overview
NameMELO3C031035
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr04: 32469312 .. 32470242 (-)
RNA-Seq ExpressionMELO3C031035
SyntenyMELO3C031035
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGACAAACTGGGGTTTTACAGGTGGGTCCCCTGATTGAGAATCGACCAACCATGCTTGCTAATTGGGAATCTCTCGGCTATCCAAAGGCGTGGCCCTCCAAATTCACAGGTCTAACTCATCCCTTTCCCTAACTATTGTTTTCTAAAAATTTATGGCCCAAACATATCACGCAGAGAGATTCGTGCTGTCTAGGCCATTCATTCCTCGAGAAGATGCCATTATTTAGGCCTTTAATGGTGGTTGTTACATCCAGTTCCTTCATTTATAGACACCACTGAACAAGAATAACTCAGCCAAGTTAAAATTTACGTTTATTGAATTTACCCGATTAGGTGATATTTTGTCGATATCCAATTTATTTAATTTTTTAATGAACAGATATCTGCTCGTGATCACGGCACTTAGACAAAAAATCCTGAGCTTCAAAGGCAGAAACTCTATTATCTCCTGCTAAAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAAAATATCGACTAAATTTTACATGCACATTTTCTATTCTCACAAGTACAGAACTTTCAGTAAGTACTTCCAGAGACTGAATTTGATCTGGACAAAGATGAAGAGTGGTTTAAGAACTCGATACAATCTTCAATGGCTTCAGCTCGATGCGAGTCCATGGAATCCGAGACCGATCTTGACCTTGTAAAAGTGGAGGCTGAAGAAACCTTTCGTGAAGATTTTCTTGTTGAGACAAAGCGAATTGCTTCACTTACTCTGGCCTTAAGGCTCTGTAGAAACCTCACCGGCAAGTACCTTGTTTCTCTGCTAAGGCCGAAGCTCCACATTCCGGCTCCGCCATCACCACCGTTGCCGTGTTTGAGCACAACCGTTGGCTTATCATTCACATCAGGACTGAAGCTGACTCGTTTGCTCGCTTTCCTTGACATTTGA

mRNA sequence

ATGTTTGGACAAACTGGGGTTTTACAGGTGGGTCCCCTGATTGAGAATCGACCAACCATGCTTGCTAATTGGGAATCTCTCGGCTATCCAAAGGCGTGGCCCTCCAAATTCACAGAGACTGAATTTGATCTGGACAAAGATGAAGAGTGGTTTAAGAACTCGATACAATCTTCAATGGCTTCAGCTCGATGCGAGTCCATGGAATCCGAGACCGATCTTGACCTTGTAAAAGTGGAGGCTGAAGAAACCTTTCGTGAAGATTTTCTTGTTGAGACAAAGCGAATTGCTTCACTTACTCTGGCCTTAAGGCTCTGTAGAAACCTCACCGGCAAGTACCTTGTTTCTCTGCTAAGGCCGAAGCTCCACATTCCGGCTCCGCCATCACCACCGTTGCCGTGTTTGAGCACAACCGTTGGCTTATCATTCACATCAGGACTGAAGCTGACTCGTTTGCTCGCTTTCCTTGACATTTGA

Coding sequence (CDS)

ATGTTTGGACAAACTGGGGTTTTACAGGTGGGTCCCCTGATTGAGAATCGACCAACCATGCTTGCTAATTGGGAATCTCTCGGCTATCCAAAGGCGTGGCCCTCCAAATTCACAGAGACTGAATTTGATCTGGACAAAGATGAAGAGTGGTTTAAGAACTCGATACAATCTTCAATGGCTTCAGCTCGATGCGAGTCCATGGAATCCGAGACCGATCTTGACCTTGTAAAAGTGGAGGCTGAAGAAACCTTTCGTGAAGATTTTCTTGTTGAGACAAAGCGAATTGCTTCACTTACTCTGGCCTTAAGGCTCTGTAGAAACCTCACCGGCAAGTACCTTGTTTCTCTGCTAAGGCCGAAGCTCCACATTCCGGCTCCGCCATCACCACCGTTGCCGTGTTTGAGCACAACCGTTGGCTTATCATTCACATCAGGACTGAAGCTGACTCGTTTGCTCGCTTTCCTTGACATTTGA

Protein sequence

MFGQTGVLQVGPLIENRPTMLANWESLGYPKAWPSKFTETEFDLDKDEEWFKNSIQSSMASARCESMESETDLDLVKVEAEETFREDFLVETKRIASLTLALRLCRNLTGKYLVSLLRPKLHIPAPPSPPLPCLSTTVGLSFTSGLKLTRLLAFLDI
Homology
BLAST of MELO3C031035 vs. NCBI nr
Match: KAG7017238.1 (hypothetical protein SDJN02_19101, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49
Identity = 112/121 (92.56%), Postives = 116/121 (95.87%), Query Frame = 0

Query: 39  ETEFDLDKDEEWFKNSIQSSMASARCESMESETDLDLVK--VEAEETFREDFLVETKRIA 98
           +TEFDLDKDEEWFKNS+QSSMASARCESMESETDLDLVK  VEAEETFREDFLV+TKR+A
Sbjct: 70  KTEFDLDKDEEWFKNSMQSSMASARCESMESETDLDLVKVEVEAEETFREDFLVDTKRMA 129

Query: 99  SLTLALRLCRNLTGKYLVSLLRPKLHIPAPPSPPLPCLSTTVGLSFTSGLKLTRLLAFLD 158
           SLTLALRLCRNLTGKYLVSLLRPKLHIPAPPS P PCLS TVGLSFTSGLKLTRLLAFLD
Sbjct: 130 SLTLALRLCRNLTGKYLVSLLRPKLHIPAPPSRP-PCLSRTVGLSFTSGLKLTRLLAFLD 189

BLAST of MELO3C031035 vs. NCBI nr
Match: KAG7027905.1 (Sulfoquinovosyl transferase SQD2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44
Identity = 104/128 (81.25%), Postives = 112/128 (87.50%), Query Frame = 0

Query: 30  PKAWPSKFTETEFDLDKDEEWFKNSIQSSMASARCESMESETDLDLVKVEAEETFREDFL 89
           PK   +   ETEF+LDKDEEWFKNS+QSS+ASARC+SMESETDLDLVKV AEETFREDFL
Sbjct: 65  PKGSRNSSIETEFNLDKDEEWFKNSMQSSIASARCDSMESETDLDLVKVAAEETFREDFL 124

Query: 90  VETKRIASLTLALRLCRNLTGKYLVSLLRPKLHIPAPPSPPLPCLSTTVGLSFTSGLKLT 149
           V+TKR+ASLTLAL+LCRN TGK LVSL RPKL IPAP SPP PCLS TVGLSFTSGLKLT
Sbjct: 125 VDTKRMASLTLALKLCRNPTGKCLVSLFRPKLKIPAPSSPP-PCLSMTVGLSFTSGLKLT 184

Query: 150 RLLAFLDI 158
           RLL FL I
Sbjct: 185 RLLDFLVI 191

BLAST of MELO3C031035 vs. NCBI nr
Match: KAG6596356.1 (hypothetical protein SDJN03_09536, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-34
Identity = 87/103 (84.47%), Postives = 93/103 (90.29%), Query Frame = 0

Query: 55  IQSSMASARCESMESETDLDLVKVEAEETFREDFLVETKRIASLTLALRLCRNLTGKYLV 114
           +QSS+ASARC+SMESETDLDLVKV AEETFREDFLV+TKR+ASLTLAL+LCRN TGK LV
Sbjct: 1   MQSSIASARCDSMESETDLDLVKVAAEETFREDFLVDTKRMASLTLALKLCRNPTGKCLV 60

Query: 115 SLLRPKLHIPAPPSPPLPCLSTTVGLSFTSGLKLTRLLAFLDI 158
           SL RPKL IPAP SPP PCLS TVGLSFTSGLKLTRLL FL I
Sbjct: 61  SLFRPKLKIPAPSSPP-PCLSMTVGLSFTSGLKLTRLLDFLVI 102

BLAST of MELO3C031035 vs. NCBI nr
Match: KGN58785.1 (hypothetical protein Csa_001275 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-13
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0

Query: 1  MFGQTGVLQVGPLIENRPTMLANWESLGYPKAWPSKFTETEF 43
          MFGQTGVLQVGP+IENRPTMLANWESLGYPKAWPSKFT   F
Sbjct: 1  MFGQTGVLQVGPVIENRPTMLANWESLGYPKAWPSKFTGHSF 42

BLAST of MELO3C031035 vs. NCBI nr
Match: KAF2288552.1 (hypothetical protein GH714_008464 [Hevea brasiliensis])

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-12
Identity = 60/118 (50.85%), Postives = 71/118 (60.17%), Query Frame = 0

Query: 29  YPKAWPSKFTETEFDLDKDEEWFKNSIQSSMASARCESMESETDLDLVKVEAEETFREDF 88
           Y    P +F ETEFDL K+EE FKNSIQSS+ASA  ES+ S  DLDLVK+ AEET REDF
Sbjct: 257 YQSLDPQEFVETEFDLCKEEEEFKNSIQSSIASALWESIASARDLDLVKL-AEETLREDF 316

Query: 89  L-VETKRIASLTLALRLCRNLTGKYLVSLLRPKLHIP------APPSPPLPCLSTTVG 140
           L ++T+R    TLA      L G++L  L   KL IP      A    P PCL   +G
Sbjct: 317 LFMDTRRRTLATLAPSRLSILAGEHLELLRSLKLKIPATLFLFAATLIPPPCLEEKMG 373

BLAST of MELO3C031035 vs. ExPASy TrEMBL
Match: A0A0A0L9Y4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732430 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-13
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0

Query: 1  MFGQTGVLQVGPLIENRPTMLANWESLGYPKAWPSKFTETEF 43
          MFGQTGVLQVGP+IENRPTMLANWESLGYPKAWPSKFT   F
Sbjct: 1  MFGQTGVLQVGPVIENRPTMLANWESLGYPKAWPSKFTGHSF 42

BLAST of MELO3C031035 vs. ExPASy TrEMBL
Match: A0A6A6KI30 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Hevea brasiliensis OX=3981 GN=GH714_008464 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.1e-12
Identity = 60/118 (50.85%), Postives = 71/118 (60.17%), Query Frame = 0

Query: 29  YPKAWPSKFTETEFDLDKDEEWFKNSIQSSMASARCESMESETDLDLVKVEAEETFREDF 88
           Y    P +F ETEFDL K+EE FKNSIQSS+ASA  ES+ S  DLDLVK+ AEET REDF
Sbjct: 257 YQSLDPQEFVETEFDLCKEEEEFKNSIQSSIASALWESIASARDLDLVKL-AEETLREDF 316

Query: 89  L-VETKRIASLTLALRLCRNLTGKYLVSLLRPKLHIP------APPSPPLPCLSTTVG 140
           L ++T+R    TLA      L G++L  L   KL IP      A    P PCL   +G
Sbjct: 317 LFMDTRRRTLATLAPSRLSILAGEHLELLRSLKLKIPATLFLFAATLIPPPCLEEKMG 373

BLAST of MELO3C031035 vs. ExPASy TrEMBL
Match: A0A6N2MQ13 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS397242 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-08
Identity = 53/107 (49.53%), Postives = 65/107 (60.75%), Query Frame = 0

Query: 41  EFDLDKDEEWFKNSIQSSMASARCESMESETDLDLVKVEAEETFREDF-LVETKRIASLT 100
           EFDL K++E F+NS+QSS+ASAR ES  S TDLDL K++ E T REDF L++TKRI   T
Sbjct: 2   EFDLCKEDEEFRNSMQSSIASARWESTASTTDLDLGKLD-EVTLREDFLLMDTKRITLAT 61

Query: 101 LALRLCRNLTGKYLVSLLRPKLHIPA------PPSPPLPCLSTTVGL 141
           LA R  R+L G+    L   K+ IPA          PLP      GL
Sbjct: 62  LARRRHRSLAGETFEVLGSLKVKIPAVFFLFPAALAPLPSFEEDCGL 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7017238.11.7e-4992.56hypothetical protein SDJN02_19101, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7027905.11.3e-4481.25Sulfoquinovosyl transferase SQD2 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6596356.11.6e-3484.47hypothetical protein SDJN03_09536, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN58785.12.6e-1390.48hypothetical protein Csa_001275 [Cucumis sativus][more]
KAF2288552.18.4e-1250.85hypothetical protein GH714_008464 [Hevea brasiliensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L9Y41.3e-1390.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732430 PE=4 SV=1[more]
A0A6A6KI304.1e-1250.85Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Hevea brasi... [more]
A0A6N2MQ131.6e-0849.53Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS397242 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031035.1MELO3C031035.1mRNA