MELO3C030947 (gene) Melon (DHL92) v4

Overview
NameMELO3C030947
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr01: 17307778 .. 17308435 (-)
RNA-Seq ExpressionMELO3C030947
SyntenyMELO3C030947
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTAATGGTGAAATTACTTATGTACTGCATGTATTTTTTCTAATTTCTGATTCTCAGTATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATTGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGGTATGGAATATAATTTAAACGTCACACAACGTTAACAATTTACATTTAGTAAACAATTTTTAAATTAGTACTCATACGTCATATTTTTTTTCTGCCCGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTTGCGGACGTGGGGTCTAACGAGCCAAGTGGCGGATATGACAGATTTGATATG

mRNA sequence

GTTTAATGGTGAAATTACTTATGTACTGCATGTATTTTTTCTAATTTCTGATTCTCAGTATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATTGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGTACTCATACGTCATATTTTTTTTCTGCCCGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTTGCGGACGTGGGGTCTAACGAGCCAAGTGGCGGATATGACAGATTTGATATG

Coding sequence (CDS)

ATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATTGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGTACTCATACGTCATATTTTTTTTCTGCCCGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTTGCGGACGTGGGGTCTAACGAGCCAAGTGGCGGATATGACAGATTTGATATG

Protein sequence

MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFFFCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM
Homology
[Close]
BLAST of MELO3C030947 vs. NCBI nr
Match: KAA0038975.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. NCBI nr
Match: TYJ96194.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96764.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97116.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK01046.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK12167.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. NCBI nr
Match: KAA0031555.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0036352.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0043921.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047622.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049406.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. NCBI nr
Match: KAA0044610.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. ExPASy TrEMBL
Match: A0A5D3CWL2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00640 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.4e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.4e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. ExPASy TrEMBL
Match: A0A5D3DCZ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00020 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.4e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. ExPASy TrEMBL
Match: A0A5D3BCN9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001070 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.4e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. ExPASy TrEMBL
Match: A0A5A7TC56 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00560 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.4e-92
Identity = 165/177 (93.22%), Postives = 165/177 (93.22%), Query Frame = 0 

Query: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFF 120
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR------- 120

Query: 121 FCPQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPSGGYDRFDM 178
               SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEP GGYDRFDM
Sbjct: 121 ----SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDM 166

[Close]
BLAST of MELO3C030947 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 43/152 (28.29%), Postives = 70/152 (46.05%), Query Frame = 0 

Query: 12  WTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAE-KLPGCQVRATTVIDCR 71
           W+ EE   LV+ L+E ++   W+  NGT     L    + M E     C+ +       R
Sbjct: 17  WSPEETKLLVQLLVEGIN-NNWRDSNGTI--SKLTVETKFMPEINKEFCRSKNYNHYLSR 76

Query: 72  IKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFFFCPQSHPAAK 131
           +K LK  +Q+  +++    SGFGW+   K   A  E++ ++++           +HP  K
Sbjct: 77  MKYLKIQYQSCLDLQ-RFSSGFGWDPLTKRFTASDEVWSDYLK-----------AHPNNK 136

Query: 132 GLLNKPFPYYDELTYVFGRDRATGRFAETFAD 163
            L    F ++DEL  +FG   ATG+ A    D
Sbjct: 137 QLRYDTFEFFDELQIIFGEGVATGKNAIGLCD 153

[Close]
BLAST of MELO3C030947 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 5.2e-08
Identity = 39/160 (24.38%), Postives = 73/160 (45.62%), Query Frame = 0 

Query: 9   RHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVID 68
           R  WT   +  L++ L+E V+ G       TF      ++V     K  G Q     V+ 
Sbjct: 324 RIFWTPPMDYHLIDLLVEQVNNGNRVGQ--TFITSAWNEMVTAFNAKF-GSQ-HNKDVLK 383

Query: 69  CRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFFF------- 128
            R K L+R +  I  +     +GF W+     ++A+ ++++ +++  +++F F       
Sbjct: 384 NRYKHLRRLYNDIKFLLEQ--NGFSWDARRDMVIADDDIWNTYIQACHILFLFKISVICL 443

Query: 129 C-----PQSHPAAKGLLNKPFPYYDELTYVFGRDRATGRF 157
           C      Q+HP A+    K  P Y  L ++FG++ + GR+
Sbjct: 444 CLQMKHVQAHPEARSYRVKTIPSYPNLCFIFGKETSDGRY 477

[Close]
BLAST of MELO3C030947 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 9.8e-07
Identity = 36/148 (24.32%), Postives = 66/148 (44.59%), Query Frame = 0 

Query: 9   RHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVID 68
           R  WT   +  L++ L+E V+ G       TF      ++V     K  G Q     V+ 
Sbjct: 324 RIFWTPPMDYHLIDLLVEQVNNGNRVGQ--TFITSAWNEMVTAFNAKF-GSQ-HNKDVLK 383

Query: 69  CRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRYSYVIFFFCPQSHPA 128
            R K L+R +  I  +     +GF W+     ++A+ ++++ ++           Q+HP 
Sbjct: 384 NRYKHLRRLYNDIKFLLEQ--NGFSWDARRDMVIADDDIWNTYI-----------QAHPE 443

Query: 129 AKGLLNKPFPYYDELTYVFGRDRATGRF 157
           A+    K  P Y  L ++FG++ + GR+
Sbjct: 444 ARSYRVKTIPSYPNLCFIFGKETSDGRY 454

The following BLAST results are available for this feature:
BLAST of MELO3C030947 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0038975.17.1e-9293.22retrotransposon protein [Cucumis melo var. makuwa][more]
TYJ96194.17.1e-9293.22retrotransposon protein [Cucumis melo var. makuwa] >TYJ96764.1 retrotransposon p... [more]
KAA0031555.17.1e-9293.22retrotransposon protein [Cucumis melo var. makuwa] >KAA0036352.1 retrotransposon... [more]
KAA0032766.17.1e-9293.22retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0044610.17.1e-9293.22retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C030947 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030947 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CWL23.4e-9293.22Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TRV13.4e-9293.22Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DCZ13.4e-9293.22Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BCN93.4e-9293.22Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TC563.4e-9293.22Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C030947 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27260.12.1e-0928.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.15.2e-0824.38unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.29.8e-0724.32unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 12..110
e-value: 4.9E-8
score: 33.9
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 2..163
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 2..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030947.1MELO3C030947.1mRNA