MELO3C030925 (gene) Melon (DHL92) v4

Overview
NameMELO3C030925
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionNBS-LRR type resistance protein
Locationchr01: 16804657 .. 16806226 (-)
RNA-Seq ExpressionMELO3C030925
SyntenyMELO3C030925
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACATATTTATCTAGTTTATATATTTTGATTCTAGCTATGTGTTCGTATTTGCTTATTGAATGTTTGTTTTCTATGTCCACAGCCATTATGTCATATCGACGTAATAATTTTATGGAGATGGACGATATGTTCCTCAAGTTTTAGGATAATTTAGATAACATCGTGGGAGGGTCGTCATCTGTGAGTGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAATTATTTCATGTTCTTTTTTCTAACTTTATATGTTATTATCGATTTATTAAGTAGGGTCTTCTTCTCAACAAGCGACTCCGACTTCTAGGAGACATGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGTAATAAATGGACGCATTCCGATGACGATCGCCCTTGGAGCGGAGAAGCCTATTTTTCCACACACCGTTCGCTTCAGCCAGGCGATAGCCGTGTGCGTGCGAAAGACATTTTCCGTCCGCTGTCTTAAGTAGGCGGACGTTGGGAGAGAATACATTGTGGTCGTCAAGGGCGACCTCCAGGTAATTAAATGCACTACACACTTTAACTAATCTAATGTGTTATGTTTATAATGTATAGCAATTGTTTGTGCTTGATTTCAATGATTAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCGGGTCGACTGTCACAGACATTTCAAAAAGTACAGCGACCTGGAGGAGGCTCTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGACACTTCCTCTGCGACCACTATATCAGTCGTGCATTTCAGGTATTTGTCATGATTAATTATGATAACAAGTTTGAATATGTATAAGAAATAAACAAATAAACAATATAATTTTTTAATGCAGGAGCAATCACGGACGAACAAGGCTACTAGACAGAAGTAGCCTTACAATCATAGTAGAGGGTCCAAGTCATTTCTACAATGACAGTACGAGCTCGCTGAGAGAAAAGAGGAGCCGGTCGATCGTGTGGAGTTGTTCCAAAAAACACATGTTCGAGCTGGGACGTTCATTATATATTTTTGCATGTTACCTAACATAGTTTTTAAATTTGTCGCAGAATCAAATACTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGAGTAGACGACCAGGCTACTCAAAAGGCCCTGGTTGGGGACCCAAGCCGAAGGCCCACAGAACGGCGAGTGCAAGTAGTTCGTCGATATCTTGTTTGCAGTCCACAGAAAAGGAGATTGAATTACAAGCTAAAATTCTTGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCGTTAGCTTCACAAGTGGAAAGCATAAAGAAGATGATTGAAGAATTAGCTCGTGCACAACAGGGACCACCATATGATCCCTAGCTCTGCGGTACATATATATGTTTCTATTATTCTTAAGTTTTTGCAATATATGATTATGTACTAAACTTAGTTACTTTTATATCATTTTTATGACCGAAGGTGTAGAATGA

mRNA sequence

CACATATTTATCTAGTTTATATATTTTGATTCTAGCTATGTGTTCGTATTTGCTTATTGAATGTTTGTTTTCTATGTCCACAGCCATTATGTCATATCGACGTAATAATTTTATGGAGATGGACGATATGTTCCTCAAGTTTTAGGATAATTTAGATAACATCGTGGGAGGGTCGTCATCTGTGAGTGACAATACGGAGCGCCACGTTGTAATAAATGGACGCATTCCGATGACGATCGCCCTTGGAGCGGAGAAGCCTATTTTTCCACACACCGTTCGCTTCAGCCAGGCGATAGCCGTGTGCGTGCGAAAGACATTTTCCGTCCGCTGTCTTAAGTAGGCGGACGTTGGGAGAGAATACATTGTGGTCGTCAAGGGCGACCTCCAGCAATTGTTTGTGCTTGATTTCAATGATTAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCGGGTCGACTGTCACAGACATTTCAAAAAGTACAGCGACCTGGAGGAGGCTCTGCCAACCCACCAAACGCATTGGAGCAATCACGGACGAACAAGGCTACTAGACAGAAGTAGCCTTACAATCATAGTAGAGGGTCCAAGTCATTTCTACAATGACAGTACGAGCTCGCTGAGAGAAAAGAGGAGCCGGTCGATCGTGTGGAGTTGTTCCAAAAAACACATAATCAAATACTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGAGTAGACGACCAGGCTACTCAAAAGGCCCTGGTTGGGGACCCAAGCCGAAGGCCCACAGAACGGCGAGTGCAAGTAGTTCGTCGATATCTTGTTTGCAGTCCACAGAAAAGGAGATTGAATTACAAGCTAAAATTCTTGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCGTTAGCTTCACAAGTGGAAAGCATAAAGAAGATGATTGAAGAATTAGCTCGTGCACAACAGGGACCACCATATGATCCCTAGCTTTACTTTTATATCATTTTTATGACCGAAGGTGTAGAATGA

Coding sequence (CDS)

ATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCGGGTCGACTGTCACAGACATTTCAAAAAGTACAGCGACCTGGAGGAGGCTCTGCCAACCCACCAAACGCATTGGAGCAATCACGGACGAACAAGGCTACTAGACAGAAGTAGCCTTACAATCATAGTAGAGGGTCCAAGTCATTTCTACAATGACAGTACGAGCTCGCTGAGAGAAAAGAGGAGCCGGTCGATCGTGTGGAGTTGTTCCAAAAAACACATAATCAAATACTGGAACTCCAATCCCAGCCTACCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGA

Protein sequence

MNRFVEHQMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHWSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWSCSKKHIIKYWNSNPSLPQRVVSHSLRMRYAIRC
Homology
[Close]
BLAST of MELO3C030925 vs. NCBI nr
Match: KAA0058973.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK11006.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 171.8 bits (434), Expect = 3.5e-39
Identity = 93/139 (66.91%), Postives = 96/139 (69.06%), Query Frame = 0 

Query: 1   MNRFVEHQMLTTFKEFRVDCHRHFKKYSDLEE-------ALPTHQTHWSNHGRTRLLDRS 60
           MN FVEHQMLTTFKEFR D HRHFKKYSD EE       AL      WSNHGRTRLL RS
Sbjct: 173 MNGFVEHQMLTTFKEFRADSHRHFKKYSDPEEAHANPPNALVGRDEDWSNHGRTRLLGRS 232

Query: 61  SLTIIVEGPSHFYNDSTSSLREKRSRSIVWSCSKKH---------------IIKYWNSNP 118
           SLT IV  PS FYNDS SSL+EK SRSI+W+C  KH               IIK WNSN 
Sbjct: 233 SLTFIVASPSRFYNDSMSSLKEKESRSIMWNCFGKHTFELGHSCHRPPRMRIIKCWNSNI 292

[Close]
BLAST of MELO3C030925 vs. NCBI nr
Match: TYK23260.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33
Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 0 

Query: 3   RFVEHQMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHWSNHGRTRLLDRSSLTIIVEGP 62
           RF+EH ML+TFKEF+ DCH+HFKKY++L   +PTH T+W NHG TRLL+RS+LTII  G 
Sbjct: 77  RFIEHHMLSTFKEFKGDCHKHFKKYTNLRMHMPTHHTYWRNHGPTRLLNRSNLTIIATGR 136

Query: 63  SHFYNDSTSSLREKRSRSIVWSCSKKH---------------IIKYWNSNPSLPQRVVSH 118
           S FYND+TSSL ++ SRSI+WSCS KH               IIK W S+ SL Q V+SH
Sbjct: 137 SRFYNDNTSSLSKEVSRSILWSCSSKHTFETGLLYCRPQKMRIIKCWKSSSSLSQMVLSH 196

[Close]
BLAST of MELO3C030925 vs. NCBI nr
Match: KAA0050386.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03398.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 152.1 bits (383), Expect = 2.9e-33
Identity = 74/96 (77.08%), Postives = 79/96 (82.29%), Query Frame = 0 

Query: 1   MNRFVEHQMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHWSNHGRTRLLDRSSLTIIVE 60
           MN+FVEHQMLTTFKEFRVD HRHFKKY+D EEA     THWSNH RTRLLDRSSLTIIV 
Sbjct: 236 MNKFVEHQMLTTFKEFRVDYHRHFKKYNDPEEARTNPPTHWSNHRRTRLLDRSSLTIIVA 295

Query: 61  GPSHFYNDSTSSLREKRSRSIVWSCSKKHIIKYWNS 97
           GPSHFYND+TSSLREK SRSIVW+C  KH  +   S
Sbjct: 296 GPSHFYNDNTSSLREKGSRSIVWNCFGKHTFELGRS 331

[Close]
BLAST of MELO3C030925 vs. NCBI nr
Match: KAA0033763.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK22372.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 6.4e-33
Identity = 77/99 (77.78%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 3   RFVEHQMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHW--------------------S 62
           +FVEHQMLTTFKEFRV CHRHFKKYSDLEEALPTHQTHW                    S
Sbjct: 150 KFVEHQMLTTFKEFRVGCHRHFKKYSDLEEALPTHQTHWLDVMRIDTSSATTISAVHFRS 209

Query: 63  NHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI 82
           NHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI
Sbjct: 210 NHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI 248

[Close]
BLAST of MELO3C030925 vs. NCBI nr
Match: KAA0061328.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK14682.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 2.4e-32
Identity = 83/118 (70.34%), Postives = 88/118 (74.58%), Query Frame = 0 

Query: 8   QMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHWSNHGRTRLLDRSSLTIIVEGPSHFYN 67
           QMLTTFKEF  DCHRHFKKYSD +EA  THQT  SNH RTRLLDRS+LTII  G S FYN
Sbjct: 181 QMLTTFKEFWSDCHRHFKKYSDPKEARLTHQT--SNHERTRLLDRSNLTIIATGQSRFYN 240

Query: 68  DSTSSLREKRSRSIVWSCSKKHIIK----YWNSN----PSLPQRVVSHSLRMRYAIRC 118
           DS SSLR+K SRS VWSC  K   +    Y  S+    PSLPQRVVSHSLRMRYAIRC
Sbjct: 241 DSMSSLRKKESRSTVWSCFGKLTFEPGRSYHRSHRMRIPSLPQRVVSHSLRMRYAIRC 296

[Close]
BLAST of MELO3C030925 vs. ExPASy TrEMBL
Match: A0A5A7USQ8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00430 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 93/139 (66.91%), Postives = 96/139 (69.06%), Query Frame = 0 

Query: 1   MNRFVEHQMLTTFKEFRVDCHRHFKKYSDLEE-------ALPTHQTHWSNHGRTRLLDRS 60
           MN FVEHQMLTTFKEFR D HRHFKKYSD EE       AL      WSNHGRTRLL RS
Sbjct: 173 MNGFVEHQMLTTFKEFRADSHRHFKKYSDPEEAHANPPNALVGRDEDWSNHGRTRLLGRS 232

Query: 61  SLTIIVEGPSHFYNDSTSSLREKRSRSIVWSCSKKH---------------IIKYWNSNP 118
           SLT IV  PS FYNDS SSL+EK SRSI+W+C  KH               IIK WNSN 
Sbjct: 233 SLTFIVASPSRFYNDSMSSLKEKESRSIMWNCFGKHTFELGHSCHRPPRMRIIKCWNSNI 292

[Close]
BLAST of MELO3C030925 vs. ExPASy TrEMBL
Match: A0A5D3DIR3 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003130 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.3e-34
Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 0 

Query: 3   RFVEHQMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHWSNHGRTRLLDRSSLTIIVEGP 62
           RF+EH ML+TFKEF+ DCH+HFKKY++L   +PTH T+W NHG TRLL+RS+LTII  G 
Sbjct: 77  RFIEHHMLSTFKEFKGDCHKHFKKYTNLRMHMPTHHTYWRNHGPTRLLNRSNLTIIATGR 136

Query: 63  SHFYNDSTSSLREKRSRSIVWSCSKKH---------------IIKYWNSNPSLPQRVVSH 118
           S FYND+TSSL ++ SRSI+WSCS KH               IIK W S+ SL Q V+SH
Sbjct: 137 SRFYNDNTSSLSKEVSRSILWSCSSKHTFETGLLYCRPQKMRIIKCWKSSSSLSQMVLSH 196

[Close]
BLAST of MELO3C030925 vs. ExPASy TrEMBL
Match: A0A5A7U876 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2679G00080 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 74/96 (77.08%), Postives = 79/96 (82.29%), Query Frame = 0 

Query: 1   MNRFVEHQMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHWSNHGRTRLLDRSSLTIIVE 60
           MN+FVEHQMLTTFKEFRVD HRHFKKY+D EEA     THWSNH RTRLLDRSSLTIIV 
Sbjct: 236 MNKFVEHQMLTTFKEFRVDYHRHFKKYNDPEEARTNPPTHWSNHRRTRLLDRSSLTIIVA 295

Query: 61  GPSHFYNDSTSSLREKRSRSIVWSCSKKHIIKYWNS 97
           GPSHFYND+TSSLREK SRSIVW+C  KH  +   S
Sbjct: 296 GPSHFYNDNTSSLREKGSRSIVWNCFGKHTFELGRS 331

[Close]
BLAST of MELO3C030925 vs. ExPASy TrEMBL
Match: A0A5D3DFK0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00960 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.1e-33
Identity = 77/99 (77.78%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 3   RFVEHQMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHW--------------------S 62
           +FVEHQMLTTFKEFRV CHRHFKKYSDLEEALPTHQTHW                    S
Sbjct: 150 KFVEHQMLTTFKEFRVGCHRHFKKYSDLEEALPTHQTHWLDVMRIDTSSATTISAVHFRS 209

Query: 63  NHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI 82
           NHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI
Sbjct: 210 NHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI 248

[Close]
BLAST of MELO3C030925 vs. ExPASy TrEMBL
Match: A0A5D3CTC6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00010 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 83/118 (70.34%), Postives = 88/118 (74.58%), Query Frame = 0 

Query: 8   QMLTTFKEFRVDCHRHFKKYSDLEEALPTHQTHWSNHGRTRLLDRSSLTIIVEGPSHFYN 67
           QMLTTFKEF  DCHRHFKKYSD +EA  THQT  SNH RTRLLDRS+LTII  G S FYN
Sbjct: 181 QMLTTFKEFWSDCHRHFKKYSDPKEARLTHQT--SNHERTRLLDRSNLTIIATGQSRFYN 240

Query: 68  DSTSSLREKRSRSIVWSCSKKHIIK----YWNSN----PSLPQRVVSHSLRMRYAIRC 118
           DS SSLR+K SRS VWSC  K   +    Y  S+    PSLPQRVVSHSLRMRYAIRC
Sbjct: 241 DSMSSLRKKESRSTVWSCFGKLTFEPGRSYHRSHRMRIPSLPQRVVSHSLRMRYAIRC 296

The following BLAST results are available for this feature:
BLAST of MELO3C030925 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058973.13.5e-3966.91NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK11006.1 NBS-LRR t... [more]
TYK23260.11.3e-3356.92NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0050386.12.9e-3377.08CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03398.1 CACTA en-... [more]
KAA0033763.16.4e-3377.78CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK22372.1 CACTA en-... [more]
KAA0061328.12.4e-3270.34NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK14682.1 NBS-LRR t... [more]
BLAST of MELO3C030925 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030925 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7USQ81.7e-3966.91NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3DIR36.3e-3456.92NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7U8761.4e-3377.08CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3DFK03.1e-3377.78CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3CTC61.2e-3270.34NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO3C030925 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030925.1MELO3C030925.1mRNA