MELO3C030831.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C030831.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionCACTA en-spm transposon protein
Locationchr04: 17853848 .. 17855790 (+)
RNA-Seq ExpressionMELO3C030831.jh1
SyntenyMELO3C030831.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGATCTCAATCACAAACAAAAAAGCGAGGAAGGGGTGTGAGAGGGTACGGTCGAAACATAGAACTAAACATGTTTATAGAAAAACATGGGAATATTAAGATAGATATTAACGAAGAGGAAGCAAAACCAATAACTACTTTTGCCCCTAAATTGTGTTAGGCATTGGTACTGCAATTCGATACACTATTCCATTGAGTTGTGAGAACTGGAAGGTGGTACCTGTGGGTGTAAGAGAGCTCGTTATTGATCGGTTGCAGGTACAATTTTGATTCTTTTATGCATTCATATACTATTTTAAATGTGAAAGTGATCCATTTATATATATATTATTAAATATGCAGACACATTTTGAATTTGATCCCCCTTACACGATTGTAAGAAAATACTTAGAAGAAATGATGCAGAATACTTTTAGAGAATTTAGAGCAAATTTGCAAAAATATTACTGTGAATCTGATGATCGGGTTGAAGCTTGTACCCATCCACCAAATAGGATAACACATGAGGATTGGAACATGATGTGCGATTGATGGGAAACAGATGCATGGAAGGTATGTTTTTCTTAGTTTAGAAAATTATTTTACATGTAAATTATGTACTTGTTCTTATCACTATTTCAATTAGAAAAAACGAGAGACAAACAAAAGAAGTCGCTCTACTGTTAAGTTCAACCATGTCACTAGGGCTAAGTCATTTCTCCAAGTTCGACTTGAATTGGTATGATGAATTGTAATTATCTTTTGTATTATTGTATGAGTATTTTTTTTTTTTTGTAATCTTAATTGAATTATTTTTGTAGAAAAAGAAAAAAGGTTGTGATGTTAATGAGATAGAAGATTCCATGAAACACACTTTCATGAAAAAGAAGGATGGATCAATGATAAGGCAAAAGATGCATATGTAAGTTTGTTTTATCATGACAAAGTAAATTCGTGTGTTGTTAAATATATTTAATCTAACCATATGTTTCATATAGTTGAAAATGCAACGAATCATTGCAGAGTCAACTGAAGCTGGTGTTTAGACGATCTCTAGTGCGAAAGCATACGATTTTGTATTAGGAAGTCATTGAATGCAAACTATCAACCCAAAAAGTGGTGAATCGTTAGATAGTAATGTGTCATCTACACGTAAGAAAGAGAAGAACGAGATGGCATAATTTAAAGAAGCTAATGAAAAGTTAACCCATGAACTTACAAAATGGGAACAAATGTGGGCTGACATAAAGAAAAAGTTGGATCTACAAGAGCAAGAGGAAGAGGAAGAAGATGCACCTTGAAACACTTAGGTATTTTTCTAAACTAAAAATTAAAAACTTATATTGTTATAGCATGTCTCAATATTATGTGTGGCTATCCTACAGTTACGGTAGTCAATTATGCATATAATGACATTTAACACCTATTTCGCACACTTTTTAGCATACCTTTTAGTTACACTTTAGTTTCAAAGTTGCACTCGGGCATGTAAGTGTTGTTTTAAGACATAAAATGTCACCTAGACGCTTTTTGAGGACATTTTAGGTAGATTTTGTTTTAAGGCTTAACGTTGGACTTGGGCATATAAGTGTTGTTTTAAGACTTAGGCACTTGGGCACATTATAAGGAGAATTTTTTTTTTATCTTAAATACATATGTCGTCACTCTTGTTTTCACTTACTTTCATACTTGATTCATCAGAAATAAGTATTTAGAGATAATACACCTATTTAGCATCCTTTTTAGTAAGACTTTAGTTTCAAAGTTGGACTTGGGCATATAAGTGTTCTTTTAAGACTTGGGCACTTGGGCATACATGTTTATATACTTTTTTGTTGCAATAACGAAATGTATATTTTGACAAAGTATTGATGTTTGAAAATATTTTCATTTTTGAATTTTTTGTTGAAATGTTTGATATTTTTTTTATATCTAGGAAATTCATTATATATTTGAAAATTAG

mRNA sequence

TAGGATCTCAATCACAAACAAAAAAGCGAGGAAGGGGCATTGGTACTGCAATTCGATACACTATTCCATTGAGTTGTGAGAACTGGAAGGTGGTACCTGTGGGTGTAAGAGAGCTCGTTATTGATCGGTTGCAGACACATTTTGAATTTGATCCCCCTTACACGATTGTAAGAAAATACTTAGAAGAAATGATGCAGAATACTTTTAGAGAATTTAGAGCAAATTTGCAAAAATATTACTGTGAATCTGATGATCGGAAAAAACGAGAGACAAACAAAAGAAGTCGCTCTACTGTTAAGTTCAACCATGTCACTAGGGCTAAGTCATTTCTCCAAGTTCGACTTGAATTGAAAAAGAAAAAAGGTTGTGATGTTAATGAGATAGAAGATTCCATGAAACACACTTTCATGAAAAAGAAGGATGGATCAATGATAAGGCAAAAGATGCATATTTTCAAAGTTGCACTCGGGCATGAAATTCATTATATATTTGAAAATTAG

Coding sequence (CDS)

ATGATGCAGAATACTTTTAGAGAATTTAGAGCAAATTTGCAAAAATATTACTGTGAATCTGATGATCGGAAAAAACGAGAGACAAACAAAAGAAGTCGCTCTACTGTTAAGTTCAACCATGTCACTAGGGCTAAGTCATTTCTCCAAGTTCGACTTGAATTGAAAAAGAAAAAAGGTTGTGATGTTAATGAGATAGAAGATTCCATGAAACACACTTTCATGAAAAAGAAGGATGGATCAATGATAAGGCAAAAGATGCATATTTTCAAAGTTGCACTCGGGCATGAAATTCATTATATATTTGAAAATTAG

Protein sequence

MMQNTFREFRANLQKYYCESDDRKKRETNKRSRSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDGSMIRQKMHIFKVALGHEIHYIFEN
Homology
BLAST of MELO3C030831.jh1 vs. NCBI nr
Match: TYJ96742.1 (uncharacterized protein E5676_scaffold986G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 4.47e-19
Identity = 57/107 (53.27%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 2   MQNTFREFRANLQKYYCESDD-----------------------------RKKRETNKRS 61
           MQNTFREFRA+L KYYCE DD                             +KKRE NKRS
Sbjct: 452 MQNTFREFRADLHKYYCEFDDPVEARANPPNRITLEDWNMMCDRWETDAWKKKREKNKRS 511

Query: 62  RSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
           RS V FNHVT A SFLQVR ELKKKKGCDV+EIE     T  ++K+G
Sbjct: 512 RSAVMFNHVTEANSFLQVRYELKKKKGCDVDEIE-VFHETHFREKEG 557

BLAST of MELO3C030831.jh1 vs. NCBI nr
Match: KAA0062811.1 (transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 4.56e-19
Identity = 57/107 (53.27%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 2   MQNTFREFRANLQKYYCESDD-----------------------------RKKRETNKRS 61
           MQNTFREFRA+L KYYCE DD                             +KKRE NKRS
Sbjct: 596 MQNTFREFRADLHKYYCEFDDPVEARANPPNRITLEDWNMMCDRWETDAWKKKREKNKRS 655

Query: 62  RSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
           RS V FNHVT A SFLQVR ELKKKKGCDV+EIE     T  ++K+G
Sbjct: 656 RSAVMFNHVTEANSFLQVRYELKKKKGCDVDEIE-VFHETHFREKEG 701

BLAST of MELO3C030831.jh1 vs. NCBI nr
Match: KAA0045598.1 (uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 2.99e-18
Identity = 57/107 (53.27%), Postives = 64/107 (59.81%), Query Frame = 0

Query: 2   MQNTFREFRANLQKYYCESDD-----------------------------RKKRETNKRS 61
           MQNTFREFRA+L KYYC+ DD                             +KKRETNKRS
Sbjct: 789 MQNTFREFRADLHKYYCQFDDLVEARANPRNRITHEDWNMMCDRWETDAWKKKRETNKRS 848

Query: 62  RSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
            S VKFNHVT AKSFLQVR ELKKKKG DV+EIE     T  ++K+G
Sbjct: 849 HSAVKFNHVTGAKSFLQVRHELKKKKGYDVDEIE-VFHETHFREKEG 894

BLAST of MELO3C030831.jh1 vs. NCBI nr
Match: KAA0032076.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 1.23e-17
Identity = 54/107 (50.47%), Postives = 64/107 (59.81%), Query Frame = 0

Query: 2   MQNTFREFRANLQKYYCESDD-----------------------------RKKRETNKRS 61
           MQN FREFRA L KYYC+ DD                             +KK+ETNKRS
Sbjct: 280 MQNIFREFRAGLHKYYCKFDDFIEARANPPDKITHEDWNMMCDRWETDAWKKKQETNKRS 339

Query: 62  RSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
           RS VKFNHV  AKSFLQVR EL+KKKGCDV+E+E   + T  ++K+G
Sbjct: 340 RSAVKFNHVIGAKSFLQVRHELEKKKGCDVDEVE-VFQETHFREKEG 385

BLAST of MELO3C030831.jh1 vs. NCBI nr
Match: TYK29140.1 (uncharacterized protein E5676_scaffold120G002850 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 3.96e-13
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0

Query: 24  KKRETNKRSRSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
           KKRETNKRSRS VKFNHVT AKSFLQVR ELKKKKGCDV+EIE     T  ++K+G
Sbjct: 500 KKRETNKRSRSAVKFNHVTGAKSFLQVRHELKKKKGCDVDEIE-VFHETHFREKEG 554

BLAST of MELO3C030831.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BA62 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00340 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.16e-19
Identity = 57/107 (53.27%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 2   MQNTFREFRANLQKYYCESDD-----------------------------RKKRETNKRS 61
           MQNTFREFRA+L KYYCE DD                             +KKRE NKRS
Sbjct: 452 MQNTFREFRADLHKYYCEFDDPVEARANPPNRITLEDWNMMCDRWETDAWKKKREKNKRS 511

Query: 62  RSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
           RS V FNHVT A SFLQVR ELKKKKGCDV+EIE     T  ++K+G
Sbjct: 512 RSAVMFNHVTEANSFLQVRYELKKKKGCDVDEIE-VFHETHFREKEG 557

BLAST of MELO3C030831.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VAV0 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold357G00300 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.21e-19
Identity = 57/107 (53.27%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 2   MQNTFREFRANLQKYYCESDD-----------------------------RKKRETNKRS 61
           MQNTFREFRA+L KYYCE DD                             +KKRE NKRS
Sbjct: 596 MQNTFREFRADLHKYYCEFDDPVEARANPPNRITLEDWNMMCDRWETDAWKKKREKNKRS 655

Query: 62  RSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
           RS V FNHVT A SFLQVR ELKKKKGCDV+EIE     T  ++K+G
Sbjct: 656 RSAVMFNHVTEANSFLQVRYELKKKKGCDVDEIE-VFHETHFREKEG 701

BLAST of MELO3C030831.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TRX4 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001040 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.45e-18
Identity = 57/107 (53.27%), Postives = 64/107 (59.81%), Query Frame = 0

Query: 2   MQNTFREFRANLQKYYCESDD-----------------------------RKKRETNKRS 61
           MQNTFREFRA+L KYYC+ DD                             +KKRETNKRS
Sbjct: 789 MQNTFREFRADLHKYYCQFDDLVEARANPRNRITHEDWNMMCDRWETDAWKKKRETNKRS 848

Query: 62  RSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
            S VKFNHVT AKSFLQVR ELKKKKG DV+EIE     T  ++K+G
Sbjct: 849 HSAVKFNHVTGAKSFLQVRHELKKKKGYDVDEIE-VFHETHFREKEG 894

BLAST of MELO3C030831.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SPZ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.97e-18
Identity = 54/107 (50.47%), Postives = 64/107 (59.81%), Query Frame = 0

Query: 2   MQNTFREFRANLQKYYCESDD-----------------------------RKKRETNKRS 61
           MQN FREFRA L KYYC+ DD                             +KK+ETNKRS
Sbjct: 280 MQNIFREFRAGLHKYYCKFDDFIEARANPPDKITHEDWNMMCDRWETDAWKKKQETNKRS 339

Query: 62  RSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
           RS VKFNHV  AKSFLQVR EL+KKKGCDV+E+E   + T  ++K+G
Sbjct: 340 RSAVKFNHVIGAKSFLQVRHELEKKKGCDVDEVE-VFQETHFREKEG 385

BLAST of MELO3C030831.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E0V3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002850 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.92e-13
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0

Query: 24  KKRETNKRSRSTVKFNHVTRAKSFLQVRLELKKKKGCDVNEIEDSMKHTFMKKKDG 79
           KKRETNKRSRS VKFNHVT AKSFLQVR ELKKKKGCDV+EIE     T  ++K+G
Sbjct: 500 KKRETNKRSRSAVKFNHVTGAKSFLQVRHELKKKKGCDVDEIE-VFHETHFREKEG 554

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYJ96742.14.47e-1953.27uncharacterized protein E5676_scaffold986G00340 [Cucumis melo var. makuwa][more]
KAA0062811.14.56e-1953.27transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa][more]
KAA0045598.12.99e-1853.27uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa][more]
KAA0032076.11.23e-1750.47transposase [Cucumis melo var. makuwa][more]
TYK29140.13.96e-1375.00uncharacterized protein E5676_scaffold120G002850 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BA622.16e-1953.27DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7VAV02.21e-1953.27Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuw... [more]
A0A5A7TRX41.45e-1853.27DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7SPZ35.97e-1850.47Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE... [more]
A0A5D3E0V31.92e-1375.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004252Probable transposase, Ptta/En/Spm, plantPFAMPF03004Transposase_24coord: 11..86
e-value: 1.8E-8
score: 34.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030831.jh1.t1MELO3C030831.jh1.t1mRNA