MELO3C030781 (gene) Melon (DHL92) v4

Overview
NameMELO3C030781
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionPol protein
Locationchr04: 13445601 .. 13448686 (-)
RNA-Seq ExpressionMELO3C030781
SyntenyMELO3C030781
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTACTTTTTAGGATACACAATTAGAATGGGAGTGAGATTTGGTATTTACTTCATTGGTTTAAAACTCCCCACGCTTTTCATACATCTCCTGATGACTTTGTGCATTGAGAGATCCTCATTTTCTGTAGTGTTTTGACTTGTTAAATACTTCATTTATGATTATCCTCATCTTTCTTAGGTACTTTCTAATATCGTCGTTGTTAAATACTTGAGAAATGGTTGATCGAATGGTTGACTGGAGGATTCCTCATAGTATGAAGGTTAGTACAACATGTACATTCTCAATGTTCAACCCTTTCATAATATCATTTTATATGTGTATGTGTTGAGGATGATTGGACTACAAACTTTTAAAGATGAATTGTTTTTCTTTTTTTGCTAAAACTTGCTAAATTTTATTTAGGTTGTTGCTTCAAGAATTATTTGGTGAAACTTACTATAAGGCTTCATGAAATATTAACACTAGAAAAAATGTAATTATTGAGGGTCATAACATAATTTAATATTTTAGAGTATTCTAGTTAATAATTTTATTTATCTTTGTAAATTGAGAATAGTTTGTGGAGAAACATGAATAGCCATTCTACTTGTATAATATTATTGTAAATTATGTACACATATGACTTACTATTGAAGAATGAAATTATTGTTGATTGGAAAGGTTATTTTGTTGATGAATCTATCTTTATTTGAATGAATGTAATGCAGGAAATGAGAAATGTAAAAAGTGTCGAGCATACTACCTTATTTGACATATAAAAAGAATCAAGTATACTATCTTACTTGACATGTAAAAAGTGTCAAGTAAAAACATCTTACTTGACACGTAAACAACGTCAAGTATGACATCTTAGTTGACACAAATATGACATCAGGAAATATAATACTTAACGATCTTTTAGTGTCAAGTAATATGACTATACTTGACAGTTAATTACTTGACACTTTTTAAAACATCAAGTATAGGTTTACTTGACACTTTATGAATGTCAAGTAATCCAATTTTTGTAGTAGGGGTGAGCATTGGGCGGTCGGGGTCGGTTTTCCGATCAAACCGCCCCGAACCGACTACAAGTCGGCACGGAAGTATGAAAACCGGCCGGTCCAACCGACGGTCGGGTCGGTCGATTTTCCTTTTTTTTTTCCTCTCCTTCTTTCTTTCTTTCCTGTTTCTTCTCCTCCTCCTCCTTCCTTTTCTATGTTTCTTGCTTTCTTTTTGATATCAAACGATTTTAAATGACGTTATTATGTTTTATTTCACTTTTTAATTTTAATAAAAAAGTCTACGATATATATTCTATATTGTCTTAAAATCATATAATTGTGATTAAAAAATAAAATCAAGTTCTATTAATTTCAATGCTTAGTTCATAGGTATTACACAAATTAATAAAATAAACAACATAAAAATAAGAATCTAAACATACTACCAAAATGAAATATATATAAAATATTATAGGGTTAGAAACATCCAAGTTCAATTCAGTTCACCACATTACTATTAATAGTCACAAATACAACCAAAGTATGAAACAAAAACACTATGATAATCTAGTCAATAGAAATATTACAAGTCTTGGATCAGAATTAGTTAATAATCGGTAATTGACAACTTATCAAAATCTGGAAGGTCTTCAAGCTCCTTTTCATTCTCCATAACCACCCGAAATCCTACATAATCGATATGAAGAATTTCCTAAATAATTTAAGATTTCACTAAAGTTACACATTACAACTACAAAAGATATCATGTAAAGATTTGAAAATACCTTCTTCAAATTTTGAAGCCTCTTCCAATTCATGTTGAAATTGAAGATGTATTGGATCAGAATTTAGCCAGTTTTGAGTACATATGAGAGCCTCCACTGTTTTAGGAGCCAATGAGCAGCGTGATGAGTCAGCAACACGTCCTCCAATACTAAAAGCCGACTCAGACGCTACAGTAGAAACTAGAATAGCCAAAATATCTCTAGCCATATGACCAAGAACCTCAAATCGATCACTGTTCATCTTCCACCACTGTAGTATGTCAAAATCACCTTCGGTCCTAACATTGGCTTCCAACAAATAGATATCAATCTCCGATGATCCCTGTTCGAAAGGTGTAGTAGAATCATCTTCAAATTCCTCAACAATCGTGTCGTAGACAAAATCTTCACCCACATTTTCATTCGAATCAAAATCAATATTAGCATCCAAGCCTGAAACAGTTTGTGTACTAGTTGTACTAGTACTACTACATCCTTGTCTACTCCCACTTCGAGTAGTACTATACTCATGAAAGAGACGTCTACAACATTGTTCCACTACATTTCCCATGGATTCAGCAACCTCAGGACCAAAAAAAAATTTCAAACAAAAAGATACAAATCTTAATTTCTTTCGAGGATCCAACACAATAGCAACATACAACAACAAATTATTCTTTTCATTGTTTCCCCAATATTTCTCGAATTTTGCCTTCATGTTATTAGCCATTCCAACTAACAATGCATTTGCACTACCCGCATTCAAACGTATACAATTCTGAACCACTGTAATCTGATGGAAAACGAAGTTCGAAGTAGTATACAAAGAACCCGAAATCTTTAATGTGACATCATAAAATACTTTTAAAAATCGTATTAACATCCTAGCATTTGTCCAAACTTCCTTATTCGGTGACATATCATGTCTATACGAGGCATCTTCATCTTCTAATCTATCAAAAGCTTTTTCAAACTTAACAGCAGTTTCAAGCATCATATATGTGGAGTTCCATCTTGTAGGAACATCAAGACACACATAACTCTTACAAGCAATTTTTTCAAGTTCAATGCACTTTTTAAATTTCAAAAAACGAGTAGGAGAAGACCTTATAAATCGCACAGCAGATCGAATCCTATCAATACAATCGTTATGTTCCTTAAAAGCATCAGTTACTATAAGATTCAATATATGGGCACAACAACGAACATGTAGAAATTCCCCACCAAACAATAATTCTTTATTGAATCTCTTTAAAAGATAAGCAACAGCAGTGTCATTCGAACTTGCATTATCAACCGTCAAAGTCATTACCCTCTCAATGCCCCAATCCTTTAA

mRNA sequence

TTTTACTTTTTAGGATACACAATTAGAATGGGAGTGAGATTTGGTATTTACTTCATTGGTTTAAAACTCCCCACGCTTTTCATACATCTCCTGATGACTTTGTGCATTGAGAGATCCTCATTTTCTGTAGTGTTTTGACTTGTTAAATACTTCATTTATGATTATCCTCATCTTTCTTAGGTACTTTCTAATATCGTCGTTGTTAAATACTTGAGAAATGGTTGATCGAATGGTTGACTGGAGGATTCCTCATAGTATGAAGAATTATTTGGTGAAACTTACTATAAGGCTTCATGAAATATTAACACTAGAAAAAATGGGTGAGCATTGGGCGGTCGGGGTCGGTTTTCCGATCAAACCGCCCCGAACCGACTACAAGTCGGCACGGAAGTATGAAAACCGGCCGGTCCAACCGACGGTCGGGTCGATAAGCAACAGCAGTGTCATTCGAACTTGCATTATCAACCGTCAAAGTCATTACCCTCTCAATGCCCCAATCCTTTAA

Coding sequence (CDS)

ATGGTTGATCGAATGGTTGACTGGAGGATTCCTCATAGTATGAAGAATTATTTGGTGAAACTTACTATAAGGCTTCATGAAATATTAACACTAGAAAAAATGGGTGAGCATTGGGCGGTCGGGGTCGGTTTTCCGATCAAACCGCCCCGAACCGACTACAAGTCGGCACGGAAGTATGAAAACCGGCCGGTCCAACCGACGGTCGGGTCGATAAGCAACAGCAGTGTCATTCGAACTTGCATTATCAACCGTCAAAGTCATTACCCTCTCAATGCCCCAATCCTTTAA

Protein sequence

MVDRMVDWRIPHSMKNYLVKLTIRLHEILTLEKMGEHWAVGVGFPIKPPRTDYKSARKYENRPVQPTVGSISNSSVIRTCIINRQSHYPLNAPIL
Homology
[Close]
BLAST of MELO3C030781 vs. NCBI nr
Match: KAA0033843.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 4.6e-05
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 35  GEHWAVGVGFPIKPPRTDYKSARKYENRPVQPTV 69
           GEH  +GV FPIKP RTDYKSARKYENRP  P +
Sbjct: 286 GEHRTIGVDFPIKPSRTDYKSARKYENRPRPPVL 319

[Close]
BLAST of MELO3C030781 vs. ExPASy TrEMBL
Match: A0A5A7STL3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00150 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-05
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 35  GEHWAVGVGFPIKPPRTDYKSARKYENRPVQPTV 69
           GEH  +GV FPIKP RTDYKSARKYENRP  P +
Sbjct: 286 GEHRTIGVDFPIKPSRTDYKSARKYENRPRPPVL 319

The following BLAST results are available for this feature:
BLAST of MELO3C030781 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0033843.14.6e-0573.53pol protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C030781 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7STL32.2e-0573.53Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00150 ... [more]
BLAST of MELO3C030781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030781.1MELO3C030781.1mRNA