MELO3C030768 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030768
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	aspartic proteinase-like
Location	chr04: 12438192 .. 12438923 (-)
RNA-Seq Expression	MELO3C030768
Synteny	MELO3C030768

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGTATTTTTCTTTTCCCTATTTGTGGAAACTACAAATTTAAATATTTGAATCCATATCATCCTCATCTTGTAACTAACTGTGATCTTGATATTGTTGGATTGAAGAATTACTTGAATGCTCAGTATTTTGGTGAGATTGGTATTGGTACTCCCCCTAAAAAGTTTACCGTTGTTCCCATCATCTTAGTAATTAAATGGTTTATTTGTCTATTATATATTATCGAATGAAATGATTTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTCCAAGTACAAGTCAAAGAATGGTCCGTAAGAATTAACTTTTATAATCTCAAAGCTTGTTTTCTTCATTTTGATCTTGTTGTACTATCATTGTGTTGAAAGTTCGATTGATGTTGTACTCCAACAAACTCTTTTCAATTGTGATCATATCTTTACCTCTGATTTGTGGTTCTATTTTATATTCACGATCTGCTTTCCAATGCTATGAAGACTTCATATTCCGATTTGTTAAGAATTTTGGTCACTTAACTGGAGATTTGATACATGAAATAAGCATTGGTCATGACCCTTCTAGTGAGCTTAGGTACTTTTATAATAGTTATTGATATTCAAACAGGAACTTCAAAGGTGTTGCTTGAGAGCTTATGTGGAGGGACCTTTTACAGGTATCATGTACATCCTTTTGCTGATGGAAGATGGATGTTTCCCGGGATTGGTGAGTTTCATTGCTATGACAAA

mRNA sequence

ATGTCAGGTATTTTTCTTTTCCCTATTTGTGGAAACTACAAATTTAAATATTTGAATCCATATCATCCTCATCTTGTAACTAACTGTGATCTTGATATTGTTGGATTGAAGAATTACTTGAATGCTCAGTATTTTGGTGAGATTGGTATTGGTACTCCCCCTAAAAAGTTTACCGTTGTTCCCATCATCTTAGAACTTCAAAGGTGTTGCTTGAGAGCTTATGTGGAGGGACCTTTTACAGGTATCATGTACATCCTTTTGCTGATGGAAGATGGATGTTTCCCGGGATTGGTGAGTTTCATTGCTATGACAAA

Coding sequence (CDS)

ATGTCAGGTATTTTTCTTTTCCCTATTTGTGGAAACTACAAATTTAAATATTTGAATCCATATCATCCTCATCTTGTAACTAACTGTGATCTTGATATTGTTGGATTGAAGAATTACTTGAATGCTCAGTATTTTGGTGAGATTGGTATTGGTACTCCCCCTAAAAAGTTTACCGTTGTTCCCATCATCTTAGAACTTCAAAGGTGTTGCTTGAGAGCTTATGTGGAGGGACCTTTTACAGGTATCATGTACATCCTTTTGCTGATGGAAGATGGATGTTTCCCGGGATTGGTGAGTTTCATTGCTATGACA

Protein sequence

MSGIFLFPICGNYKFKYLNPYHPHLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVVPIILELQRCCLRAYVEGPFTGIMYILLLMEDGCFPGLVSFIAMT

Homology

[Close]

BLAST of MELO3C030768 vs. NCBI nr
Match: XP_016900389.1 (PREDICTED: uncharacterized protein LOC107990883 isoform X2 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 6.0e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 64  LELQRCCLRAYVEGPFTGIMYILLLMEDGCFPGLVSFIAMT 105
           +ELQRCCLRAYVEGPFTGIMYILLLMEDGCFPGLVSFIAMT
Sbjct: 28  MELQRCCLRAYVEGPFTGIMYILLLMEDGCFPGLVSFIAMT 68

[Close]

BLAST of MELO3C030768 vs. NCBI nr
Match: KAA0065836.1 (aspartic proteinase A1-like [Cucumis melo var. makuwa] >TYK24045.1 aspartic proteinase A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-08
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 17  YLNPYHP--HLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           Y+  Y P  +L  + D DIVGLKNYLNAQYFGEIGIGTPP+KFTVV
Sbjct: 61  YVEKYQPSANLGDSDDFDIVGLKNYLNAQYFGEIGIGTPPQKFTVV 106

[Close]

BLAST of MELO3C030768 vs. NCBI nr
Match: XP_016900600.1 (PREDICTED: aspartic proteinase A1-like [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-08
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 17  YLNPYHP--HLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           Y+  Y P  +L  + D DIVGLKNYLNAQYFGEIGIGTPP+KFTVV
Sbjct: 61  YVEKYQPSANLGDSDDFDIVGLKNYLNAQYFGEIGIGTPPQKFTVV 106

[Close]

BLAST of MELO3C030768 vs. NCBI nr
Match: KAE8654222.1 (Aspartic proteinase A3 [Hibiscus syriacus])

HSP 1 Score: 68.2 bits (165), Expect = 4.9e-08
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 17  YLNPY--HPHLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           YL  Y  H HL  + D+DIV LKNY++AQYFGEIG+GTPP+KFTV+
Sbjct: 60  YLGKYHHHGHLQDSKDIDIVALKNYMDAQYFGEIGVGTPPQKFTVI 105

[Close]

BLAST of MELO3C030768 vs. NCBI nr
Match: XP_039055700.1 (aspartic proteinase A1-like [Hibiscus syriacus] >XP_039055701.1 aspartic proteinase A1-like [Hibiscus syriacus])

HSP 1 Score: 68.2 bits (165), Expect = 4.9e-08
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 17  YLNPY--HPHLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           YL  Y  H HL  + D+DIV LKNY++AQYFGEIG+GTPP+KFTV+
Sbjct: 60  YLGKYHHHGHLQDSKDIDIVALKNYMDAQYFGEIGVGTPPQKFTVI 105

[Close]

BLAST of MELO3C030768 vs. ExPASy Swiss-Prot
Match: Q42456 (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-08
Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 32  DIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           DIV LKNY+NAQYFGEIG+GTPP+KFTV+
Sbjct: 73  DIVALKNYMNAQYFGEIGVGTPPQKFTVI 101

[Close]

BLAST of MELO3C030768 vs. ExPASy Swiss-Prot
Match: O04057 (Aspartic proteinase OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-08
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 15  FKYLNPYHPHLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           F+  NP   +L  + D DIV LKNYL+AQY+GEI IGTPP+KFTV+
Sbjct: 62  FRKYNP-KGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVI 106

[Close]

BLAST of MELO3C030768 vs. ExPASy Swiss-Prot
Match: P42210 (Phytepsin OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-08
Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 32  DIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           DIV LKNY+NAQYFGEIG+GTPP+KFTV+
Sbjct: 72  DIVALKNYMNAQYFGEIGVGTPPQKFTVI 100

[Close]

BLAST of MELO3C030768 vs. ExPASy Swiss-Prot
Match: Q8VYL3 (Aspartic proteinase A2 OS=Arabidopsis thaliana OX=3702 GN=APA2 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 30  DLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           D DIV LKNYL+AQY+GEI IGTPP+KFTV+
Sbjct: 75  DADIVPLKNYLDAQYYGEIAIGTPPQKFTVI 105

[Close]

BLAST of MELO3C030768 vs. ExPASy Swiss-Prot
Match: O65390 (Aspartic proteinase A1 OS=Arabidopsis thaliana OX=3702 GN=APA1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-07
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 30 DLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
          D D+V LKNYL+AQY+GEI IGTPP+KFTVV
Sbjct: 68 DADVVVLKNYLDAQYYGEIAIGTPPQKFTVV 98

[Close]

BLAST of MELO3C030768 vs. ExPASy TrEMBL
Match: A0A1S4DWN2 (uncharacterized protein LOC107990883 isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990883 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 64  LELQRCCLRAYVEGPFTGIMYILLLMEDGCFPGLVSFIAMT 105
           +ELQRCCLRAYVEGPFTGIMYILLLMEDGCFPGLVSFIAMT
Sbjct: 28  MELQRCCLRAYVEGPFTGIMYILLLMEDGCFPGLVSFIAMT 68

[Close]

BLAST of MELO3C030768 vs. ExPASy TrEMBL
Match: A0A5D3DKC0 (Aspartic proteinase A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00070 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 17  YLNPYHP--HLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           Y+  Y P  +L  + D DIVGLKNYLNAQYFGEIGIGTPP+KFTVV
Sbjct: 61  YVEKYQPSANLGDSDDFDIVGLKNYLNAQYFGEIGIGTPPQKFTVV 106

[Close]

BLAST of MELO3C030768 vs. ExPASy TrEMBL
Match: A0A1S4DY11 (aspartic proteinase A1-like OS=Cucumis melo OX=3656 GN=LOC103491074 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 17  YLNPYHP--HLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           Y+  Y P  +L  + D DIVGLKNYLNAQYFGEIGIGTPP+KFTVV
Sbjct: 61  YVEKYQPSANLGDSDDFDIVGLKNYLNAQYFGEIGIGTPPQKFTVV 106

[Close]

BLAST of MELO3C030768 vs. ExPASy TrEMBL
Match: A0A6A2W981 (Aspartic proteinase A3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117056pilonHSYRG01153 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-08
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 17  YLNPY--HPHLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           YL  Y  H HL  + D+DIV LKNY++AQYFGEIG+GTPP+KFTV+
Sbjct: 60  YLGKYHHHGHLQDSKDIDIVALKNYMDAQYFGEIGVGTPPQKFTVI 105

[Close]

BLAST of MELO3C030768 vs. ExPASy TrEMBL
Match: A0A6A3CA80 (Aspartic proteinase A2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00008706pilonHSYRG00058 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-07
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 17  YLNPYH--PHLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           YL  YH   +L  + D+DIV LKNY++AQYFGEIGIGTPP+KFTV+
Sbjct: 60  YLGKYHHLGNLQDSNDIDIVALKNYMDAQYFGEIGIGTPPQKFTVI 105

[Close]

BLAST of MELO3C030768 vs. TAIR 10
Match: AT1G62290.1 (Saposin-like aspartyl protease family protein )

HSP 1 Score: 57.4 bits (137), Expect = 8.0e-09
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 30  DLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           D DIV LKNYL+AQY+GEI IGTPP+KFTV+
Sbjct: 75  DADIVPLKNYLDAQYYGEIAIGTPPQKFTVI 105

[Close]

BLAST of MELO3C030768 vs. TAIR 10
Match: AT1G62290.2 (Saposin-like aspartyl protease family protein )

HSP 1 Score: 57.4 bits (137), Expect = 8.0e-09
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 30  DLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           D DIV LKNYL+AQY+GEI IGTPP+KFTV+
Sbjct: 75  DADIVPLKNYLDAQYYGEIAIGTPPQKFTVI 105

[Close]

BLAST of MELO3C030768 vs. TAIR 10
Match: AT1G11910.1 (aspartic proteinase A1 )

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 30 DLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
          D D+V LKNYL+AQY+GEI IGTPP+KFTVV
Sbjct: 68 DADVVVLKNYLDAQYYGEIAIGTPPQKFTVV 98

[Close]

BLAST of MELO3C030768 vs. TAIR 10
Match: AT4G04460.1 (Saposin-like aspartyl protease family protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.0e-08
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 19  NPYHPHLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           +P H   + + + D+V LKNYL+AQY+G+I IGTPP+KFTV+
Sbjct: 62  SPKHYFRLNDENADMVPLKNYLDAQYYGDITIGTPPQKFTVI 103

[Close]

BLAST of MELO3C030768 vs. TAIR 10
Match: AT4G04460.2 (Saposin-like aspartyl protease family protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.0e-08
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 19  NPYHPHLVTNCDLDIVGLKNYLNAQYFGEIGIGTPPKKFTVV 61
           +P H   + + + D+V LKNYL+AQY+G+I IGTPP+KFTV+
Sbjct: 62  SPKHYFRLNDENADMVPLKNYLDAQYYGDITIGTPPQKFTVI 103

The following BLAST results are available for this feature:

BLAST of MELO3C030768 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900389.1	6.0e-14	97.56	PREDICTED: uncharacterized protein LOC107990883 isoform X2 [Cucumis melo]	[more]
KAA0065836.1	2.2e-08	71.74	aspartic proteinase A1-like [Cucumis melo var. makuwa] >TYK24045.1 aspartic prot...	[more]
XP_016900600.1	2.2e-08	71.74	PREDICTED: aspartic proteinase A1-like [Cucumis melo]	[more]
KAE8654222.1	4.9e-08	65.22	Aspartic proteinase A3 [Hibiscus syriacus]	[more]
XP_039055700.1	4.9e-08	65.22	aspartic proteinase A1-like [Hibiscus syriacus] >XP_039055701.1 aspartic protein...	[more]

BLAST of MELO3C030768 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42456	1.7e-08	82.76	Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g...	[more]
O04057	1.7e-08	60.87	Aspartic proteinase OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
P42210	1.7e-08	82.76	Phytepsin OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
Q8VYL3	1.1e-07	77.42	Aspartic proteinase A2 OS=Arabidopsis thaliana OX=3702 GN=APA2 PE=2 SV=1	[more]
O65390	1.5e-07	77.42	Aspartic proteinase A1 OS=Arabidopsis thaliana OX=3702 GN=APA1 PE=1 SV=1	[more]

BLAST of MELO3C030768 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWN2	2.9e-14	97.56	uncharacterized protein LOC107990883 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DKC0	1.1e-08	71.74	Aspartic proteinase A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S4DY11	1.1e-08	71.74	aspartic proteinase A1-like OS=Cucumis melo OX=3656 GN=LOC103491074 PE=3 SV=1	[more]
A0A6A2W981	2.4e-08	65.22	Aspartic proteinase A3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117056pilonH...	[more]
A0A6A3CA80	1.2e-07	65.22	Aspartic proteinase A2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00008706pilonH...	[more]

BLAST of MELO3C030768 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62290.1	8.0e-09	77.42	Saposin-like aspartyl protease family protein	[more]
AT1G62290.2	8.0e-09	77.42	Saposin-like aspartyl protease family protein	[more]
AT1G11910.1	1.0e-08	77.42	aspartic proteinase A1	[more]
AT4G04460.1	4.0e-08	54.76	Saposin-like aspartyl protease family protein	[more]
AT4G04460.2	4.0e-08	54.76	Saposin-like aspartyl protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 13..61 e-value: 4.8E-7 score: 31.8
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 19..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030768.1	MELO3C030768.1	mRNA