MELO3C030673 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030673
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 22827837 .. 22828001 (-)
RNA-Seq Expression	MELO3C030673
Synteny	MELO3C030673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCGAATGCACTGCATCCGAGAGAGCGAGCGCCAACGACGCGGCCCGCAATGACAACCGAAGATGTCAAGGCGGAACGCGATGCGGGCTATCGGGTTCGTTGTCCACCCAAAGATGGGTGTCGACAGAAAGGGGCCAACGGGACGCGACGCTTCCATCGA

mRNA sequence

ATGCCACCGAATGCACTGCATCCGAGAGAGCGAGCGCCAACGACGCGGCCCGCAATGACAACCGAAGATGTCAAGGCGGAACGCGATGCGGGCTATCGGGTTCGTTGTCCACCCAAAGATGGGTGTCGACAGAAAGGGGCCAACGGGACGCGACGCTTCCATCGA

Coding sequence (CDS)

ATGCCACCGAATGCACTGCATCCGAGAGAGCGAGCGCCAACGACGCGGCCCGCAATGACAACCGAAGATGTCAAGGCGGAACGCGATGCGGGCTATCGGGTTCGTTGTCCACCCAAAGATGGGTGTCGACAGAAAGGGGCCAACGGGACGCGACGCTTCCATCGA

Protein sequence

MPPNALHPRERAPTTRPAMTTEDVKAERDAGYRVRCPPKDGCRQKGANGTRRFHR

Homology

[Close]

BLAST of MELO3C030673 vs. NCBI nr
Match: TYK03168.1 (hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 9.2e-06
Identity = 31/43 (72.09%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 1  MPPNALHPRERAPTTRPAMTTEDVKAERDAGYRVRCPPKDGCR 44
          MPPNALHPRERA TTRP MTT+DVK E DAGYR       GCR
Sbjct: 1  MPPNALHPRERAATTRPTMTTKDVKGELDAGYR-------GCR 36

[Close]

BLAST of MELO3C030673 vs. ExPASy TrEMBL
Match: A0A5D3BW21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00500 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.4e-06
Identity = 31/43 (72.09%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 1  MPPNALHPRERAPTTRPAMTTEDVKAERDAGYRVRCPPKDGCR 44
          MPPNALHPRERA TTRP MTT+DVK E DAGYR       GCR
Sbjct: 1  MPPNALHPRERAATTRPTMTTKDVKGELDAGYR-------GCR 36

The following BLAST results are available for this feature:

BLAST of MELO3C030673 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03168.1	9.2e-06	72.09	hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C030673 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C030673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BW21	4.4e-06	72.09	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C030673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030673.1	MELO3C030673.1	mRNA