MELO3C030657.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C030657.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTransposase
Locationchr11: 16918650 .. 16920155 (-)
RNA-Seq ExpressionMELO3C030657.jh1
SyntenyMELO3C030657.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTCACAACGAAGGTGGTTAAAGAGGATGCGAATGTGGATGTGATTATTCTAAATGATCAACATGATGATGCTACCGAGGTAATTAATTAAGTTTTAGCACAAATTGATGCATGAGTTTCTATAAGTCTTATAAAGTTTATTAATGTTGGATTTATGGCTTTCTTAGGTTTGTAATGAAAAAGAAGTTGTATGTGAGTCAAATATCAAGATGCCATTACCTTTGAAGACAATACTCAGGTTTGCAGAAAAGGTAATGGACAAAGATTCAAGGATTCGTTACCAACTACCATTCTCGTTGTTTGGTATCGATAAGAAGACTTGTGTTCTTCGAGAAGATATTATTGATTTTTGTAACATGTGAGAAGTCAAGACTTTGATATTGGTTGCATATATGGTGTAAGTACTCATTCATCTACTCTAATCTTTTTATATAAATACTTGTTTATTGACTTTTCTATCTTTATTAGGTATTTGCATTTACAAGATCATGTTTCAAATTACATCTTTGTTGACCCGTCCCTTATATATGTTGGACATAACACGCAAGAAGTTAGAGCTCGCAATATGTGCAGTACATTAGTGGCTTCAAAATGAAACGAACTCGTTTTGGCTCCATTCAATCCAAGGTAAGTAATAATACTATACTAATGAATTCATTAAAATAAGCTATAGGTGATTTTCTTCTTTGAATAGAACATCTTCTTTGTATTCATCATCTGGGAAAATTGGAGAATCTAGGTTATGAATTATGTGAAGGCAATATTGGGGGGAGGGGGGGTTCAACTTTCAATTGTTGTCGTCTTCTTTTGATTTACCGTAGAGAAACTGGTTTGTAGGCATCTTAGTTATTTGGGTTATTTATGTAGAGAAACAAGTTTTATGACATTAAGTTATATGAAAACAATCTACTTGTATTCTCTTTCTATGTAGTGGTCATTAGGCACTTCTGGCTATTAATGCATACGATAAGACAGTTTATTATCTTGACTCACTTCGAACAACATCAAGAGTAGATATTAGGTATGTAACTGACACGTAAGTAAGCTTCTTTAATATATGATGTTTTCCATTTAAAGTTCACTTCATTATAACGTGTAGTTGTTTCTTGACCATAGGGCTATTACTATCTTTCGATCTCATAAAAATATTCAAAAAAGTCGTAAACAACCAATATGGAAAACCGTGAAGGTAAGTGTACACATATTTATTCATTAACGTGTGATTGTTTCTTGGTAATATGCATTATATTGAATATTATGTGGTTGTTTCTTACCAATATGCATTATATTGGGTACTATGTGGTTGTTTCTTGGCAATATGCATTATATTGGGTACTATGTGGTTGTTTCTTGGCAATATGCATTGTATTGAAGACTATGTGGTTGTTTCTTGGCAATATGCATTATGTTGGATACTATGTATTTACAGTGTCATTTACAAGTTGGAGTAGTTGAATATGGGTACTATGTGATGAGATACATGAGAGATATAATCACCAAT

mRNA sequence

ATGAATGTCACAACGAAGGTGGTTAAAGAGGATGCGAATGTGGATGTGATTATTCTAAATGATCAACATGATGATGCTACCGAGGTTTGTAATGAAAAAGAAGTTGTATGTGAGTCAAATATCAAGATGCCATTACCTTTGAAGACAATACTCAGGTTTGCAGAAAAGTGTCATTTACAAGTTGGAGTAGTTGAATATGGGTACTATGTGATGAGATACATGAGAGATATAATCACCAAT

Coding sequence (CDS)

ATGAATGTCACAACGAAGGTGGTTAAAGAGGATGCGAATGTGGATGTGATTATTCTAAATGATCAACATGATGATGCTACCGAGGTTTGTAATGAAAAAGAAGTTGTATGTGAGTCAAATATCAAGATGCCATTACCTTTGAAGACAATACTCAGGTTTGCAGAAAAGTGTCATTTACAAGTTGGAGTAGTTGAATATGGGTACTATGTGATGAGATACATGAGAGATATAATCACCAAT

Protein sequence

MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQVGVVEYGYYVMRYMRDIITN
Homology
BLAST of MELO3C030657.jh1 vs. NCBI nr
Match: KAA0047907.1 (hypothetical protein E6C27_scaffold133G001860 [Cucumis melo var. makuwa])

HSP 1 Score: 163 bits (412), Expect = 4.41e-50
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0

Query: 1  MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQ 60
          MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQ
Sbjct: 1  MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQ 60

Query: 61 VGVVEYGYYVMRYMRDIITN 80
          VGVVEYGYYVMRYMRDIITN
Sbjct: 61 VGVVEYGYYVMRYMRDIITN 80

BLAST of MELO3C030657.jh1 vs. NCBI nr
Match: TYK20378.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (296), Expect = 7.00e-31
Identity = 61/79 (77.22%), Postives = 66/79 (83.54%), Query Frame = 0

Query: 2   NVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQV 61
           N+  +VVKE+ NVDVIILND  +DA EV NEKEVVCESNIKM LPLKTIL F EKC LQV
Sbjct: 131 NLEKEVVKEEVNVDVIILNDLQEDAIEVRNEKEVVCESNIKMSLPLKTILIFGEKCLLQV 190

Query: 62  GVVEYGYYVMRYMRDIITN 80
            V+E GYYVMRYMRDIITN
Sbjct: 191 AVIECGYYVMRYMRDIITN 209

BLAST of MELO3C030657.jh1 vs. NCBI nr
Match: KAA0051623.1 (uncharacterized protein E6C27_scaffold4784G00030 [Cucumis melo var. makuwa] >TYK27633.1 uncharacterized protein E5676_scaffold3445G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (250), Expect = 2.81e-24
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 0

Query: 1  MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEK 56
          MNVTTKVVKE+ NVDVIILNDQ +DA EVCNEKE+VC+SNIKMPLPLKTILRFAEK
Sbjct: 1  MNVTTKVVKEEVNVDVIILNDQQEDAIEVCNEKEIVCDSNIKMPLPLKTILRFAEK 56

BLAST of MELO3C030657.jh1 vs. NCBI nr
Match: TYK11038.1 (uncharacterized protein E5676_scaffold73G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 6.01e-23
Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0

Query: 1  MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEK 56
          MNVTTKVVKE+ NVDVI LNDQH+DA EV NEKE+VC+SNIKMPLPLKTILRF EK
Sbjct: 1  MNVTTKVVKEEVNVDVITLNDQHEDAIEVRNEKEIVCDSNIKMPLPLKTILRFVEK 56

BLAST of MELO3C030657.jh1 vs. NCBI nr
Match: KAA0067089.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.64e-22
Identity = 47/56 (83.93%), Postives = 52/56 (92.86%), Query Frame = 0

Query: 1   MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEK 56
           MNVTTKVVKE+ NVDV+ILNDQH+DA +VCNEKEVVCESNI MPLPLKTIL+F EK
Sbjct: 239 MNVTTKVVKEEVNVDVVILNDQHEDARKVCNEKEVVCESNINMPLPLKTILKFVEK 294

BLAST of MELO3C030657.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U117 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001860 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 2.14e-50
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0

Query: 1  MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQ 60
          MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQ
Sbjct: 1  MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQ 60

Query: 61 VGVVEYGYYVMRYMRDIITN 80
          VGVVEYGYYVMRYMRDIITN
Sbjct: 61 VGVVEYGYYVMRYMRDIITN 80

BLAST of MELO3C030657.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DA41 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00820 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 3.39e-31
Identity = 61/79 (77.22%), Postives = 66/79 (83.54%), Query Frame = 0

Query: 2   NVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEKCHLQV 61
           N+  +VVKE+ NVDVIILND  +DA EV NEKEVVCESNIKM LPLKTIL F EKC LQV
Sbjct: 131 NLEKEVVKEEVNVDVIILNDLQEDAIEVRNEKEVVCESNIKMSLPLKTILIFGEKCLLQV 190

Query: 62  GVVEYGYYVMRYMRDIITN 80
            V+E GYYVMRYMRDIITN
Sbjct: 191 AVIECGYYVMRYMRDIITN 209

BLAST of MELO3C030657.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U6T9 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3445G00180 PE=3 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.36e-24
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 0

Query: 1  MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEK 56
          MNVTTKVVKE+ NVDVIILNDQ +DA EVCNEKE+VC+SNIKMPLPLKTILRFAEK
Sbjct: 1  MNVTTKVVKEEVNVDVIILNDQQEDAIEVCNEKEIVCDSNIKMPLPLKTILRFAEK 56

BLAST of MELO3C030657.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CIL6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00140 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.91e-23
Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0

Query: 1  MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEK 56
          MNVTTKVVKE+ NVDVI LNDQH+DA EV NEKE+VC+SNIKMPLPLKTILRF EK
Sbjct: 1  MNVTTKVVKEEVNVDVITLNDQHEDAIEVRNEKEIVCDSNIKMPLPLKTILRFVEK 56

BLAST of MELO3C030657.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VP79 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001440 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.94e-23
Identity = 47/56 (83.93%), Postives = 52/56 (92.86%), Query Frame = 0

Query: 1   MNVTTKVVKEDANVDVIILNDQHDDATEVCNEKEVVCESNIKMPLPLKTILRFAEK 56
           MNVTTKVVKE+ NVDV+ILNDQH+DA +VCNEKEVVCESNI MPLPLKTIL+F EK
Sbjct: 239 MNVTTKVVKEEVNVDVVILNDQHEDARKVCNEKEVVCESNINMPLPLKTILKFVEK 294

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0047907.14.41e-50100.00hypothetical protein E6C27_scaffold133G001860 [Cucumis melo var. makuwa][more]
TYK20378.17.00e-3177.22putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
KAA0051623.12.81e-2487.50uncharacterized protein E6C27_scaffold4784G00030 [Cucumis melo var. makuwa] >TYK... [more]
TYK11038.16.01e-2383.93uncharacterized protein E5676_scaffold73G00140 [Cucumis melo var. makuwa][more]
KAA0067089.11.64e-2283.93putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U1172.14e-50100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DA413.39e-3177.22Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7U6T91.36e-2487.50ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3CIL62.91e-2383.93Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VP797.94e-2383.93Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030657.jh1.t1MELO3C030657.jh1.t1mRNA