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MELO3C030554.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGACGATCGAAGACAAGAAAGTTAAGATGGTCGTATTGAAACTCAAATCAGGTGCATCGGCTTGGTGGGATCAAATCCAAGTCAATCGATGCTTATGCTCACTTCTAATTGGAAAGACAACATCGTTTAAAGTAAAAGATGTAGCGAACAATGTTTTGGGACGATGGAACTACTTATTCTATCATCAAAGCACTCAAAATCTGCATGTTATATAG ATGAAGACGATCGAAGACAAGAAAGTTAAGATGGTCGTATTGAAACTCAAATCAGGTGCATCGGCTTGGTGGGATCAAATCCAAGTCAATCGATGCTTATGCTCACTTCTAATTGGAAAGACAACATCGTTTAAAGTAAAAGATGTAGCGAACAATGTTTTGGGACGATGGAACTACTTATTCTATCATCAAAGCACTCAAAATCTGCATGTTATATAG ATGAAGACGATCGAAGACAAGAAAGTTAAGATGGTCGTATTGAAACTCAAATCAGGTGCATCGGCTTGGTGGGATCAAATCCAAGTCAATCGATGCTTATGCTCACTTCTAATTGGAAAGACAACATCGTTTAAAGTAAAAGATGTAGCGAACAATGTTTTGGGACGATGGAACTACTTATTCTATCATCAAAGCACTCAAAATCTGCATGTTATATAG MKTIEDKKVKMVVLKLKSGASAWWDQIQVNRCLCSLLIGKTTSFKVKDVANNVLGRWNYLFYHQSTQNLHVI Homology
BLAST of MELO3C030554.jh1 vs. NCBI nr
Match: KAA0057976.1 (uncharacterized protein E6C27_scaffold274G002800 [Cucumis melo var. makuwa]) HSP 1 Score: 52.4 bits (124), Expect = 3.52e-06 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. NCBI nr
Match: KAA0054551.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK20400.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 50.1 bits (118), Expect = 1.43e-05 Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. NCBI nr
Match: XP_031745523.1 (uncharacterized protein LOC116405899 [Cucumis sativus]) HSP 1 Score: 51.2 bits (121), Expect = 2.92e-05 Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. NCBI nr
Match: TYJ99683.1 (uncharacterized protein E5676_scaffold562G00770 [Cucumis melo var. makuwa]) HSP 1 Score: 50.8 bits (120), Expect = 3.64e-05 Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. NCBI nr
Match: KAA0054761.1 (uncharacterized protein E6C27_scaffold437G00390 [Cucumis melo var. makuwa]) HSP 1 Score: 48.9 bits (115), Expect = 3.94e-05 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UUZ0 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002800 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 1.70e-06 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. ExPASy TrEMBL
Match: A0A5A7ULZ0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold519G00250 PE=4 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 6.91e-06 Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BK55 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00770 PE=4 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.76e-05 Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UMH8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00390 PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.91e-05 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of MELO3C030554.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TDG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001280 PE=4 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.28e-04 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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