MELO3C030519 (gene) Melon (DHL92) v4

Overview
NameMELO3C030519
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr04: 13499986 .. 13500171 (-)
RNA-Seq ExpressionMELO3C030519
SyntenyMELO3C030519
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAATTCAACATCAAGAGATCAGAATTAGAAAGTCAAATAGTAGCAATCATGAGCTCAACATGGACTGTAGCTAGTATGATCATAGAGACATGGGCAGAATATGCAAAGAGAGAAGTTGAACATTATTATGAGGTGCGTCGAGAGAAATATGAGGTTGCTTCAAACAAAAACAACCCTTAG

mRNA sequence

ATGGATGAATTCAACATCAAGAGATCAGAATTAGAAAGTCAAATAGTAGCAATCATGAGCTCAACATGGACTGTAGCTAGTATGATCATAGAGACATGGGCAGAATATGCAAAGAGAGAAGTTGAACATTATTATGAGGTGCGTCGAGAGAAATATGAGGTTGCTTCAAACAAAAACAACCCTTAG

Coding sequence (CDS)

ATGGATGAATTCAACATCAAGAGATCAGAATTAGAAAGTCAAATAGTAGCAATCATGAGCTCAACATGGACTGTAGCTAGTATGATCATAGAGACATGGGCAGAATATGCAAAGAGAGAAGTTGAACATTATTATGAGGTGCGTCGAGAGAAATATGAGGTTGCTTCAAACAAAAACAACCCTTAG

Protein sequence

MDEFNIKRSELESQIVAIMSSTWTVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNNP
Homology
BLAST of MELO3C030519 vs. NCBI nr
Match: TYK22029.1 (uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 9.2e-07
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMII TWAE AKR+VEHYY+ RREKYEVASN+NN
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNN 38

BLAST of MELO3C030519 vs. NCBI nr
Match: KAA0032933.1 (uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 9.2e-07
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMII TWAE AKR+VEHYY+ RREKYEVASN+NN
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNN 38

BLAST of MELO3C030519 vs. NCBI nr
Match: KAA0045599.1 (hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMIIETWA  AKREVEHYYE RR K+EVASN+NN
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVASNRNN 87

BLAST of MELO3C030519 vs. NCBI nr
Match: KGN65701.1 (hypothetical protein Csa_019881 [Cucumis sativus])

HSP 1 Score: 53.9 bits (128), Expect = 5.6e-04
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 27 SMIIETWAEYAKREVEHYYEVRREKYEVASNKNNP 62
          SM+I TWAE A+R++EHYYEV R KYEVASN+N P
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVASNRNGP 37

BLAST of MELO3C030519 vs. ExPASy TrEMBL
Match: A0A5D3DFG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00720 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.5e-07
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMII TWAE AKR+VEHYY+ RREKYEVASN+NN
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNN 38

BLAST of MELO3C030519 vs. ExPASy TrEMBL
Match: A0A5A7SR74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00040 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.5e-07
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMII TWAE AKR+VEHYY+ RREKYEVASN+NN
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNN 38

BLAST of MELO3C030519 vs. ExPASy TrEMBL
Match: A0A5A7TWH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001050 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.6e-07
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMIIETWA  AKREVEHYYE RR K+EVASN+NN
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVASNRNN 87

BLAST of MELO3C030519 vs. ExPASy TrEMBL
Match: A0A0A0M0F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-04
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 27 SMIIETWAEYAKREVEHYYEVRREKYEVASNKNNP 62
          SM+I TWAE A+R++EHYYEV R KYEVASN+N P
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVASNRNGP 37

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK22029.19.2e-0783.78uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa][more]
KAA0032933.19.2e-0783.78uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa][more]
KAA0045599.11.6e-0683.78hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa][more]
KGN65701.15.6e-0471.43hypothetical protein Csa_019881 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFG84.5e-0783.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SR744.5e-0783.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TWH67.6e-0783.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0M0F22.7e-0471.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030519.1MELO3C030519.1mRNA