MELO3C030439 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030439
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr04: 8341635 .. 8341880 (-)
RNA-Seq Expression	MELO3C030439
Synteny	MELO3C030439

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAAATAGGGTTAAAAAGAAGCTTGGCAGCAAACGGCTGGGATGGAGGGGAGAAATTGGCTAGTAGCTCGGCTGAGGAAGAAGGCGGCTCGGGTGCACGCAGTCACGACTTGGGTAGGGTTGGCTCAAGGCGGGTGGCTCGGATAGGCGTGCACGTGGCTCGTACTTCATGCGGCAGCTGGCGCGGCTCGGGTATGATTGGCGTGGCTCGGGGTGAAAGTCAACAGCTAACGCATGCGAAG

mRNA sequence

ATGGGTCAAATAGGGTTAAAAAGAAGCTTGGCAGCAAACGGCTGGGATGGAGGGGAGAAATTGGCTAGTAGCTCGGCTGAGGAAGAAGGCGGCTCGGGTGCACGCAGTCACGACTTGGGTAGGGTTGGCTCAAGGCGGGTGGCTCGGATAGGCGTGCACGTGGCTCGTACTTCATGCGGCAGCTGGCGCGGCTCGGGTATGATTGGCGTGGCTCGGGGTGAAAGTCAACAGCTAACGCATGCGAAG

Coding sequence (CDS)

ATGGGTCAAATAGGGTTAAAAAGAAGCTTGGCAGCAAACGGCTGGGATGGAGGGGAGAAATTGGCTAGTAGCTCGGCTGAGGAAGAAGGCGGCTCGGGTGCACGCAGTCACGACTTGGGTAGGGTTGGCTCAAGGCGGGTGGCTCGGATAGGCGTGCACGTGGCTCGTACTTCATGCGGCAGCTGGCGCGGCTCGGGTATGATTGGCGTGGCTCGGGGTGAAAGTCAACAGCTAACGCATGCGAAG

Protein sequence

MGQIGLKRSLAANGWDGGEKLASSSAEEEGGSGARSHDLGRVGSRRVARIGVHVARTSCGSWRGSGMIGVARGESQQLTHAK

Homology

[Close]

BLAST of MELO3C030439 vs. NCBI nr
Match: KAA0036798.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYJ95865.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 5.7e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MGQIGLKRSLAANGWDGGEKLASSSAEEEGGSGARSHDLGRVGSRRVARIGVHVARTSCG 60
          MGQIGLKRSLAANGWDGGEKLASSSAEEEGGSGARSHDLGRVGSRRVARIGVHVARTSCG
Sbjct: 1  MGQIGLKRSLAANGWDGGEKLASSSAEEEGGSGARSHDLGRVGSRRVARIGVHVARTSCG 60

Query: 61 SWRGSGMIGVARGESQQLTHAK 83
          SWRGSGMIGVARGESQQLTHAK
Sbjct: 61 SWRGSGMIGVARGESQQLTHAK 82

[Close]

BLAST of MELO3C030439 vs. ExPASy TrEMBL
Match: A0A5A7T204 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001590 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.8e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MGQIGLKRSLAANGWDGGEKLASSSAEEEGGSGARSHDLGRVGSRRVARIGVHVARTSCG 60
          MGQIGLKRSLAANGWDGGEKLASSSAEEEGGSGARSHDLGRVGSRRVARIGVHVARTSCG
Sbjct: 1  MGQIGLKRSLAANGWDGGEKLASSSAEEEGGSGARSHDLGRVGSRRVARIGVHVARTSCG 60

Query: 61 SWRGSGMIGVARGESQQLTHAK 83
          SWRGSGMIGVARGESQQLTHAK
Sbjct: 61 SWRGSGMIGVARGESQQLTHAK 82

The following BLAST results are available for this feature:

BLAST of MELO3C030439 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036798.1	5.7e-36	100.00	putative mitochondrial protein [Cucumis melo var. makuwa] >TYJ95865.1 putative m...	[more]

BLAST of MELO3C030439 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C030439 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T204	2.8e-36	100.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of MELO3C030439 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030439.1	MELO3C030439.1	mRNA