MELO3C030259 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030259
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Exocyst complex component SEC6
Location	chr03: 20555108 .. 20558280 (-)
RNA-Seq Expression	MELO3C030259
Synteny	MELO3C030259

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGGGAAGTTCTAAACTTTCTTCTGTTTTATTAGGGTTCTATATGTTCATTTTATAGTAAGTTCATCGGTCTTAGTATAGCTATGGGTTCCACAAATATGAGAAGGTCATTCTGGTTCTAATTTTTACTTGCATTCTTGATTAAATTTGGAAATAATACCATCTTCTTTGGAATCAATATAAGCTTTTGATCTTTGAAAACTTTGATTATGTTTAATGATTCTATTGCATTGATTATGATGGTGAAATTGAACTGAGTTCTGCTAGCTATTTATTAAAAATATTTTGTGCTAACTCTAAGTGAAGCCTTCACTACTTGTTTTGTATGTTATGGCAATTACTTTTTTACTTCATATTCTTATTTTACCAAACATTTTTCCATTCCATAAACTAGGTTGGCTTAAGGTTTCTTAACTTAGCATGTAATTCCTCCTCATGAATGCCCGTAGAACATTATTCTAATTTAATTGCATTATTCATTATTCTCATAAGAAATGTCAAGTGTTTCAATGTGTTATTATGTAGTGCCAACCATGATAGTTACCGTTCTGAACTAATGACATACAAGTCATATGCCCTCAACCAAGATGTTAGTGGTTCTAATCTTTTCATCTCACATGTGGTTGAACTTAGAAAAATTTCAAAATGGTGAGTATTGCTTATTACGACCATAACTGTTCTACTTCTAACTTGTAAGTGCATTTGATTAAGTTTAGGAGGTTTAATCAAAATATGGGCTTTTTTTTATTTGTGGATAATTTGCTGACTTTAATTAAGCTTAACAGACAATAGACTAATTTGAAATTCCTGGAATAAAAAAATACCTCATATTACATTAGGTACCATCAGATTCTCATTGAAATGAACTCTTGCGCTTCTACTTGAGATTTTCAAGATCAAGTTCATTGCACGAATGGAACATCAAATGTTAAGGAAGCTCTTGGCCTTTTTAAGATGGAAATTAATGTCTGATGTTTCTATATGGTAAGACTTGTATTCTGGTTCTTTATTGCAGAAAGCCTTTTCGAAGAGGAAATTACATTGACTATCTCCTCAATTTTCAAGTCTCTTTTTTGTTTCCAATTTCTGTTTAATGCAAGATGATGGTTGAGGATCTCGGTGTCGAAGCAAAGGAATCTGTCGTACGCAAGGTTGCCAAACTTATGTGCCTTCTAGAGCTTCTGCAGTCAATTAATTCGATCAAGGCTGATTATATTACTCATCAGCAGGTACTTCTTTTTATGAATTTTCATCACATTTTTCAATTCTTTTGTTCGTTTGCGAGATGTGCCTTGAATTTTATGTTGTTTTTTTTTCCAAATTTTTGTGCTAGAGCTTTGTAGGTATTCGTACTAATGGTAGGACGTAGAGCCAGGAATTCTAATTTTGTTTTATGTTCTGTTGACAATGACAAATCTTTATTTTGGTTTGGAAAGAGTGGGTGCTAATCTTGAGGATTCTGAAATTAGTGGGTTAATGCAAGTTGTAAGTTGCTATCTTCTCTCATGAGAAATTAAACCTCTCTTACTAGGTTTCATGTAACGACCCAACTTCTTATACTAAGCCGAAGTCATTACTAATTTGAAAGATAAGTAAATTTCTTAAATTTAAAAATATAAAATAAAAAAACCTCAAATACTCATTTAAAATCATAAACAAGTGTTCGTAAAGATAATATTAAATAAAATCCTAACTCGGGCCCTATCTAGTTTTAAGAAAAAAAATAATAGAAAATAAAATAGAAAATGCATCAGATCAAATGACATAAAGCGAAAGCAAAAAGAGGTCCCTGTGGCTCGTCACGGTCACTTCTTGACAATCGTCGGCTTCCCTCTGCCCTTACTTCTACCTCTGCTTGAAAAAAATTAAACAAGAAAGAGTGAGTATAAAAATATACTCAGTAAAAGACTCACTACTAGTCCCGCTAGGTGCCTGTTAACTTCCTATTAGAGTCCTGTAAAGTGGTACCCCTAAACTGGTACGTTCCCGAACACGTGCAATCTGTGATCCCGTAGGAACATATCTGGTCTTCGGTGAACCCAAAGAAATACCTAGGACAACTGGTCTTTAGTGTACCCAAAGGAAACACTAAGACAATCGAGCTGTGAGTGACCCCGTCGAATCACTCATAATCATGTCTATGTCTATGTCATACGTCTATGTCATACTGGACTAGTGGTCCCGTCGGACTACACAGTCATAAAAGGTAGTGATCCCGAAGGACAACCATGCGGGTACGACTCTAATAGCTAAAGTTAACAATACAATCTAACCATAGCATACATAACATACATCATCATAAACATGGCATAAGTATCGATCATAACATTTCTAATCAAACATTGTCATTAAAGACATAACACAGTTGTCATCATCATTATACTACCAGTAATAAACATGTTAACAGCTATCATCATCAATCACCCATACAATGACAGTCATTATTAATAGCATCCAGTTATACATTAGTTATCACTAATGTATAACAATAAGTACTTGCACTCGCTTAAATTCATTTTGAGGGTCTAGTAGTAGAATCTCTTACCTGGAGATTAGTTAAAACCGAAGGTAATCTTAATAGCAAGGTCAAGCTTCCAAGGAATAATCCTAAACAGTAAGGGGAAAATACTAAGTTTAATAATTAACTCGCAGATGATTAAGGATCCAAAAATCCAGTTGGTTTAACTTACCCAAAAATCGAGGCCGAATTCGATTTACACTTAGTTGTACAAATTCCCAGCTTAGTTTCCAGTTAAATCTAACCAATTTAATCCACAATCAAAATTTCATTAACTAGAGTCCAAATTCAATATTTGTCGGACACTAATCCAAAACCCAATCGAGACTTACCAAAATAGGTGAAAAAACCAAAGAATAAGCTAGGTGGCTCAAAAACGACTTGGAAGACAGAGACCGGATCGGTTAGGGTTGAGAGAATCGGCTCGAGTAGGCGGCTCACACGCGTAGAGGTAGCTTGACTGGGGTTGCGTGCAGATCGGACGCTAGCTCAGCTCACACGGACAGCTCGGTGGCTTCGCACAAGCGTGCGCGCGGCTCAGACTTCACGTGCCCGGATTGCTAACGGCGACGGCTCGCACTGACAGAGACGGCTCACGACGGTTTCCGATGGTCAACGACACTCGGCTGACGGAAAGAGGCGACGGTTGA

mRNA sequence

ATGGCTTTGGGAAGTTCTAAACTTTCTTCTGTTTTATTAGGTAAGTTCATCGGTCTTAGTATAGCTATGGGTTCCACAAATATGAGAAGTGCCAACCATGATAGTTACCGTTCTGAACTAATGACATACAAGTCATATGCCCTCAACCAAGATATGATGGTTGAGGATCTCGGTGTCGAAGCAAAGGAATCTGTCGTACGCAAGGTTGCCAAACTTATGTGCCTTCTAGAGCTTCTGCAGTCAATTAATTCGATCAAGGCTGATTATATTACTCATCAGCAGGACGTAGAGCCAGGAATTCTAATTTTGTTTTATGTTCTGTTGACAATGACAAATCTTTATTTTGGTTTGGAAAGAGTGGGTGCTAATCTTGAGGATTCTGAAATTAGTGGGTTAATGCAAGTTGTGAAAAAACCAAAGAATAAGCTAGGTGGCTCAAAAACGACTTGGAAGACAGAGACCGGATCGGTTAGGGTTGAGAGAATCGGCTCGAGTAGGCGGCTCACACGCGTAGAGCTCAGCTCACACGGACAGCTCGGTGGCTTCGCACAAGCGTGCGCGCGGCTCAGACTTCACGTGCCCGGATTGCTAACGGCGACGGCTCGCACTGACAGAGACGGCTCACGACGGTTTCCGATGGTCAACGACACTCGGCTGACGGAAAGAGGCGACGGTTGA

Coding sequence (CDS)

ATGGCTTTGGGAAGTTCTAAACTTTCTTCTGTTTTATTAGGTAAGTTCATCGGTCTTAGTATAGCTATGGGTTCCACAAATATGAGAAGTGCCAACCATGATAGTTACCGTTCTGAACTAATGACATACAAGTCATATGCCCTCAACCAAGATATGATGGTTGAGGATCTCGGTGTCGAAGCAAAGGAATCTGTCGTACGCAAGGTTGCCAAACTTATGTGCCTTCTAGAGCTTCTGCAGTCAATTAATTCGATCAAGGCTGATTATATTACTCATCAGCAGGACGTAGAGCCAGGAATTCTAATTTTGTTTTATGTTCTGTTGACAATGACAAATCTTTATTTTGGTTTGGAAAGAGTGGGTGCTAATCTTGAGGATTCTGAAATTAGTGGGTTAATGCAAGTTGTGAAAAAACCAAAGAATAAGCTAGGTGGCTCAAAAACGACTTGGAAGACAGAGACCGGATCGGTTAGGGTTGAGAGAATCGGCTCGAGTAGGCGGCTCACACGCGTAGAGCTCAGCTCACACGGACAGCTCGGTGGCTTCGCACAAGCGTGCGCGCGGCTCAGACTTCACGTGCCCGGATTGCTAACGGCGACGGCTCGCACTGACAGAGACGGCTCACGACGGTTTCCGATGGTCAACGACACTCGGCTGACGGAAAGAGGCGACGGTTGA

Protein sequence

MALGSSKLSSVLLGKFIGLSIAMGSTNMRSANHDSYRSELMTYKSYALNQDMMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQDVEPGILILFYVLLTMTNLYFGLERVGANLEDSEISGLMQVVKKPKNKLGGSKTTWKTETGSVRVERIGSSRRLTRVELSSHGQLGGFAQACARLRLHVPGLLTATARTDRDGSRRFPMVNDTRLTERGDG

Homology

[Close]

BLAST of MELO3C030259 vs. NCBI nr
Match: XP_030971190.1 (exocyst complex component SEC6-like [Quercus lobata])

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-07
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKES VR+VAKL+ L ELLQSI SIKADYIT QQ
Sbjct: 1  MMVEDLGVEAKESAVREVAKLLPLPELLQSIASIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. NCBI nr
Match: XP_021893694.1 (exocyst complex component SEC6-like [Carica papaya])

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-07
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKE+ VR+VAKL+ L ELLQSI+SIKADYIT QQ
Sbjct: 1  MMVEDLGVEAKEAAVREVAKLLPLPELLQSISSIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. NCBI nr
Match: XP_030969492.1 (exocyst complex component SEC6 [Quercus lobata])

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-07
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKES VR+VAKL+ L ELLQSI SIKADYIT QQ
Sbjct: 1  MMVEDLGVEAKESAVREVAKLLPLPELLQSIASIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. NCBI nr
Match: XP_023901398.1 (exocyst complex component SEC6-like [Quercus suber])

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-07
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKES VR+VAKL+ L ELLQSI SIKADYIT QQ
Sbjct: 1  MMVEDLGVEAKESAVREVAKLLPLPELLQSIASIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. NCBI nr
Match: PON45885.1 (Exocyst complex component Sec [Parasponia andersonii])

HSP 1 Score: 65.5 bits (158), Expect = 6.8e-07
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKE+ VR+VAKL+ L ELLQSI SIKADYIT QQ
Sbjct: 1  MMVEDLGVEAKEAAVREVAKLLSLPELLQSIASIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. ExPASy Swiss-Prot
Match: Q94AI6 (Exocyst complex component SEC6 OS=Arabidopsis thaliana OX=3702 GN=SEC6 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKE+ VR+VAKL+ L ELLQSI+SIKADYI  QQ
Sbjct: 1  MMVEDLGVEAKEAAVREVAKLLPLPELLQSISSIKADYIARQQ 43

[Close]

BLAST of MELO3C030259 vs. ExPASy TrEMBL
Match: A0A2N9EIX6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2466 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.7e-08
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 52  MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQDVEPGILILFYV 107
           MMVEDLGVEAKE+ VR+VAKL+ L ELLQSI SIKADYIT QQ +E   L L+ +
Sbjct: 1   MMVEDLGVEAKEASVREVAKLLPLPELLQSIASIKADYITRQQALEDLFLALYVI 55

[Close]

BLAST of MELO3C030259 vs. ExPASy TrEMBL
Match: A0A7N2LRN3 (Exocyst complex component Sec6 OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKES VR+VAKL+ L ELLQSI SIKADYIT QQ
Sbjct: 1  MMVEDLGVEAKESAVREVAKLLPLPELLQSIASIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. ExPASy TrEMBL
Match: A0A7N2LPM0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKES VR+VAKL+ L ELLQSI SIKADYIT QQ
Sbjct: 1  MMVEDLGVEAKESAVREVAKLLPLPELLQSIASIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. ExPASy TrEMBL
Match: A0A2P5BAR3 (Exocyst complex component Sec OS=Parasponia andersonii OX=3476 GN=PanWU01x14_255570 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.3e-07
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKE+ VR+VAKL+ L ELLQSI SIKADYIT QQ
Sbjct: 1  MMVEDLGVEAKEAAVREVAKLLSLPELLQSIASIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. ExPASy TrEMBL
Match: A0A6J1JMF6 (Exocyst complex component Sec6 OS=Cucurbita maxima OX=3661 GN=LOC111487186 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.3e-07
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLG+EAKE+ VR+VAKL+ L ELLQSI+SIKADYIT QQ
Sbjct: 1  MMVEDLGIEAKEAAVREVAKLLPLPELLQSISSIKADYITRQQ 43

[Close]

BLAST of MELO3C030259 vs. TAIR 10
Match: AT1G71820.1 (SEC6 )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKE+ VR+VAKL+ L ELLQSI+SIKADYI  QQ
Sbjct: 1  MMVEDLGVEAKEAAVREVAKLLPLPELLQSISSIKADYIARQQ 43

[Close]

BLAST of MELO3C030259 vs. TAIR 10
Match: AT1G71820.2 (SEC6 )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 52 MMVEDLGVEAKESVVRKVAKLMCLLELLQSINSIKADYITHQQ 95
          MMVEDLGVEAKE+ VR+VAKL+ L ELLQSI+SIKADYI  QQ
Sbjct: 1  MMVEDLGVEAKEAAVREVAKLLPLPELLQSISSIKADYIARQQ 43

The following BLAST results are available for this feature:

BLAST of MELO3C030259 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030971190.1	5.2e-07	83.72	exocyst complex component SEC6-like [Quercus lobata]	[more]
XP_021893694.1	5.2e-07	81.40	exocyst complex component SEC6-like [Carica papaya]	[more]
XP_030969492.1	5.2e-07	83.72	exocyst complex component SEC6 [Quercus lobata]	[more]
XP_023901398.1	5.2e-07	83.72	exocyst complex component SEC6-like [Quercus suber]	[more]
PON45885.1	6.8e-07	81.40	Exocyst complex component Sec [Parasponia andersonii]	[more]

BLAST of MELO3C030259 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AI6	2.6e-09	79.07	Exocyst complex component SEC6 OS=Arabidopsis thaliana OX=3702 GN=SEC6 PE=1 SV=1	[more]

BLAST of MELO3C030259 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9EIX6	6.7e-08	69.09	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2466 PE=3 SV=1	[more]
A0A7N2LRN3	2.5e-07	83.72	Exocyst complex component Sec6 OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A7N2LPM0	2.5e-07	83.72	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A2P5BAR3	3.3e-07	81.40	Exocyst complex component Sec OS=Parasponia andersonii OX=3476 GN=PanWU01x14_255...	[more]
A0A6J1JMF6	3.3e-07	79.07	Exocyst complex component Sec6 OS=Cucurbita maxima OX=3661 GN=LOC111487186 PE=3 ...	[more]

BLAST of MELO3C030259 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71820.1	1.9e-10	79.07	SEC6	[more]
AT1G71820.2	1.9e-10	79.07	SEC6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010326	Exocyst complex component EXOC3/Sec6	PANTHER	PTHR21292	EXOCYST COMPLEX COMPONENT SEC6-RELATED	coord: 52..95
None	No IPR available	PANTHER	PTHR21292:SF15	BNACNNG07830D PROTEIN	coord: 52..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030259.1	MELO3C030259.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006887	exocytosis
cellular_component	GO:0000145	exocyst