MELO3C030244 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030244
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	binding partner of ACD11 1-like
Location	chr03: 19611339 .. 19613938 (+)
RNA-Seq Expression	MELO3C030244
Synteny	MELO3C030244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGGTCAAGACAGCCTCCAGATCTCAAAAAGTAAGTGTATTCCTTGTTCATTATATTTTGGTTCGATTATTTCAAGTATTTTCATTTGGTTTTCATTTCCCCCTTCTTTTCTGCAGATATATGGACAAAAACCTTTAGAGTAGGTTCTATTTCTTACAAGCTTTTTTGCAATAATGTTCAAATTAGGGTTTTTCATTTTCAACATCTCTGTTTCTACAATATTTTCTCTTTCTCATTGTTTTGCCCACAAAAATTTCACTTACATTTTTTTTTCAATTCCAATTTATCAACAAAGCACTCTCTTCCTTCTTTCCTTTTGTTTATGAATTTAGTTACCTGAATCTTAGCTTAGTTTCTTTTCACTTTGATGATGAAAACTCAATGAGAAGTTTAAATTATTAAGTGTTAAATCAATGCTACTAAACTCAAAACACACATGTTCATATCTATGATGAACTTCGACTATTACTTTGATCAAATTTTTGAATGTTAATTGTCTAATTGTAGTGTCTTATTCACTAAGATATATGTTTGGATTACTTGTAGATCTGATATTTTCTTTAAGTAAATGATTGAACCTATCAACCTTGAGTTTTTTGCTGATTAGATATATGAAATCACATACTTAGTCTTTTTATATTTATTCTTTAGGTTTCTTTCATATTGAAGTTTAGTGTTTAATTTGAAGAAGAAATAATATTGAGAAAGTTAGAATTCACAACCTTATACTTTTGATATTATGTGAAAATGCCACTGGATTGAAAACAAAATGTTTAATCATTTAAACATATTCTTAATTCATAAGAAGATAAACACTTTTGCATTTCTTTAAATAATTTTTCTTTTACTTTTTAGATGAGAACTGTCAAAGTCAGCAATATCTCAAAATTTACTTGTGAGAGAGATATCAAAGAATTATTTTCATTCTATGGTGAAATCCTTTATGTTAAAATGCAAAGGTCAGTGATAATATCTCCTATTGGGAATATGGTTTACTAGTGATAGACTTTGAGAGTTTAATTTAAATTTTAGTATATTGCAAGCATTCATTTTATTTTATTGTTATTATTTTTGGTGTAGAGAAAGTGAGAACACTCAAGTGGTTTTTGTTACATATAAAGATTCTCAAGGAGCTGATATTGAAATACTTCTGACAGTATGACAAAATGGCATAATTAATTTGAAGACATGGAAGCATTCTAGTTTATACAAAATATCTTGAATGAAATACGCCTCATCATTTTTGGATTGGGAACACCATTTTGAGACTAAGGGACAGTTAAACCAACAGCTGAACCAAAATGATCCCACGAGTCTGAAGGTTGTGTGTGTCAAATCATCGCATTCTTAATGTTTGCTTTAATTGATTAACACTGCAATAATCCAAGAATTGATCATCGTTTTGGCTTTTATTTCCTCAAGTTGTCGAGACACTCGTATGTTTTCTTTACAAATAACATAATAATTAGATGCCACACCATCCAAAGCATGAGTTATCTTCTCCTTGCCTCCTATGAAAAGGTTGTTTGTCTATGTTGAAGATTCAATGGTTCAAAAATAGTTAGAATCATTTGTTATAAACTTTGCAATGATTCAAAAATGTTGCAATCAACTTGCTGATTGTTACAAACTTTTTGGATGTTATAGAGATGCATTTGTTTGATTTTCTGTTTGGTTAAAGTATGTTCCTAGGATTGCCTTTAGGAATGACAATGGACCTTTCAAGTTAAGGAAAAGTTCTCGAATGTCCATGGGTATTTTTCAGTTATTCTTCTTCTATATCTCTACGTCGAAACAAATAATTTTATGAGTTGTGTATTGTTTACTCAATGGTATTTAATGGTCTTTAATGAAGGTCACTATGCAAAAATTCACTGCTAAGATTGCTGAGAAATGTACTCACAGCCTCTTCATTTGTAAAATATCCAATTTTTATAGTAGTGATTTTAAATTGAAGCTTAGTAGTTGAGGAGAACACATGTTTGCAGTTCGTATCTTTTATTTTTTCCTTAGACAATTGATGATTAATATAACCTACAATTTTTGTTTTTTGACTTGTTAAATACTTAATTTATGATTGTCCTTGTCTTTCTTAGGTACTTCCTAATATGGTCGTTGTTAAATACTTGAGTGATGGTTGTTCTAATGGTTGACTGGAAGATTCCTCATAGTATGAAGGTTAGTACAACATGTACATTCTCAATGTGCAACCCTTTCATAGTATCGTTTTATATGTGTATGTGTTTAGATGATCGGACTACAAACTTTTAAAGATGAATTGTTTTTCTTTTTTACTAAAACTTGCTAAATTTTATTGTAGGTTGTTGCTTCAAGAATTATTTTGTGAAACTTACTATGAGGCTTTATGAAGTATTAATACTCGAAAAAACGTAATTATTGAGGGTCAGAACATAATTTAATGTTTTAGAGTTTTATATTTAGTAATTTTATTTATCGGTGTAAATTGACAGTAGTTTGTGGAGAGACATGAATAGTCATACTACTTGTATAATATTATTGTAAATTTTGTATATTATTGTAAATTATGTATACATATGACTTATTGTTGAAGAATGAAATTATTGTTGATTTGAA

mRNA sequence

ATGAGTAGGTCAAGACAGCCTCCAGATCTCAAAAAAAGAAATAATATTGAGAAAATGAGAACTGTCAAAGTCAGCAATATCTCAAAATTTACTTGTGAGAGAGATATCAAAGAATTATTTTCATTCTATGGTGAAATCCTTTATGTTAAAATGCAAAGAGAAAGTGAGAACACTCAAGTGGTTTTTGTTACATATAAAGATTCTCAAGGAGCTGATATTGAAATACTTCTGACATATGTTCCTAGGATTGCCTTTAGGAATGACAATGGACCTTTCAAGTTAAGGAAAAGTTCTCGAATGTCCATGGGTTGTTGCTTCAAGAATTATTTTGTGAAACTTACTATGAGGCTTTATGAAGTATTAATACTCGAAAAAACGTAATTATTGAGGGTCAGAACATAATTTAATGTTTTAGAGTTTTATATTTAGTAATTTTATTTATCGGTGTAAATTGACAGTAGTTTGTGGAGAGACATGAATAGTCATACTACTTGTATAATATTATTGTAAATTTTGTATATTATTGTAAATTATGTATACATATGACTTATTGTTGAAGAATGAAATTATTGTTGATTTGAA

Coding sequence (CDS)

ATGAGTAGGTCAAGACAGCCTCCAGATCTCAAAAAAAGAAATAATATTGAGAAAATGAGAACTGTCAAAGTCAGCAATATCTCAAAATTTACTTGTGAGAGAGATATCAAAGAATTATTTTCATTCTATGGTGAAATCCTTTATGTTAAAATGCAAAGAGAAAGTGAGAACACTCAAGTGGTTTTTGTTACATATAAAGATTCTCAAGGAGCTGATATTGAAATACTTCTGACATATGTTCCTAGGATTGCCTTTAGGAATGACAATGGACCTTTCAAGTTAAGGAAAAGTTCTCGAATGTCCATGGGTTGTTGCTTCAAGAATTATTTTGTGAAACTTACTATGAGGCTTTATGAAGTATTAATACTCGAAAAAACGTAA

Protein sequence

MSRSRQPPDLKKRNNIEKMRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLTYVPRIAFRNDNGPFKLRKSSRMSMGCCFKNYFVKLTMRLYEVLILEKT

Homology

[Close]

BLAST of MELO3C030244 vs. NCBI nr
Match: KAA0051959.1 (beta-galactosidase-like [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 3.1e-25
Identity = 63/75 (84.00%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          MRTVKVSNISK T ERDIKE FSF  EILYV+MQRESENTQ+V+VTYKDSQGAD  ILLT
Sbjct: 1  MRTVKVSNISKLTSERDIKEFFSFSSEILYVEMQRESENTQLVYVTYKDSQGADTVILLT 60

Query: 79 YVPRIAFRNDNGPFK 94
          YVP IAFR DNGPFK
Sbjct: 61 YVPGIAFRTDNGPFK 75

[Close]

BLAST of MELO3C030244 vs. NCBI nr
Match: XP_023520015.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-17
Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 17  EKMRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEIL 76
           EKMRTVKVSNISK T ERDI+E FSF GEILYV+MQRE+ENTQV +VTYKDSQGAD  IL
Sbjct: 58  EKMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 117

Query: 77  LT 79
           LT
Sbjct: 118 LT 119

[Close]

BLAST of MELO3C030244 vs. NCBI nr
Match: XP_022941586.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-17
Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 17  EKMRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEIL 76
           EKMRTVKVSNISK T ERDI+E FSF GEILYV+MQRE+ENTQV +VTYKDSQGAD  IL
Sbjct: 50  EKMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 109

Query: 77  LT 79
           LT
Sbjct: 110 LT 111

[Close]

BLAST of MELO3C030244 vs. NCBI nr
Match: XP_008452423.1 (PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-17
Identity = 51/60 (85.00%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          MRTVKVSNISK T ERDIKE FSF GEILYV+MQRESENTQV +VTYKDSQGAD  ILLT
Sbjct: 3  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 62

[Close]

BLAST of MELO3C030244 vs. NCBI nr
Match: XP_008452424.1 (PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo] >KAA0056831.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa] >TYJ99956.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-17
Identity = 51/60 (85.00%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          MRTVKVSNISK T ERDIKE FSF GEILYV+MQRESENTQV +VTYKDSQGAD  ILLT
Sbjct: 1  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 60

[Close]

BLAST of MELO3C030244 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.5e-06
Identity = 26/61 (42.62%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 18 KMRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILL 77
          ++R+VKV N+S    E DIKE FSF GE+  + +Q    N    +VT+K++QGA+  +LL
Sbjct: 4  QVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQ---SNEHSAYVTFKETQGAETAVLL 61

Query: 78 T 79
          +
Sbjct: 64 S 61

[Close]

BLAST of MELO3C030244 vs. ExPASy TrEMBL
Match: A0A5A7UEN2 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004390 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 63/75 (84.00%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          MRTVKVSNISK T ERDIKE FSF  EILYV+MQRESENTQ+V+VTYKDSQGAD  ILLT
Sbjct: 1  MRTVKVSNISKLTSERDIKEFFSFSSEILYVEMQRESENTQLVYVTYKDSQGADTVILLT 60

Query: 79 YVPRIAFRNDNGPFK 94
          YVP IAFR DNGPFK
Sbjct: 61 YVPGIAFRTDNGPFK 75

[Close]

BLAST of MELO3C030244 vs. ExPASy TrEMBL
Match: A0A5A7UTK1 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00920 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 6.8e-18
Identity = 51/60 (85.00%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          MRTVKVSNISK T ERDIKE FSF GEILYV+MQRESENTQV +VTYKDSQGAD  ILLT
Sbjct: 1  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 60

[Close]

BLAST of MELO3C030244 vs. ExPASy TrEMBL
Match: A0A0A0KIR7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G023900 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 6.8e-18
Identity = 51/60 (85.00%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          MRTVKVSNISK T ERDIKE FSF GEILYV+MQRESENTQV +VTYKDSQGAD  ILLT
Sbjct: 3  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 62

[Close]

BLAST of MELO3C030244 vs. ExPASy TrEMBL
Match: A0A6J1FLI4 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446898 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 6.8e-18
Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 17  EKMRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEIL 76
           EKMRTVKVSNISK T ERDI+E FSF GEILYV+MQRE+ENTQV +VTYKDSQGAD  IL
Sbjct: 50  EKMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 109

Query: 77  LT 79
           LT
Sbjct: 110 LT 111

[Close]

BLAST of MELO3C030244 vs. ExPASy TrEMBL
Match: A0A1S3BT66 (binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493460 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 6.8e-18
Identity = 51/60 (85.00%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          MRTVKVSNISK T ERDIKE FSF GEILYV+MQRESENTQV +VTYKDSQGAD  ILLT
Sbjct: 1  MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 60

[Close]

BLAST of MELO3C030244 vs. TAIR 10
Match: AT1G67950.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.5e-13
Identity = 31/69 (44.93%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 10 LKKRNNIEKMRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQ 69
          +  ++ +  ++TVK+SN+S    ++D+KE FSF G+I YV+M+ E++ +QV +VT+KDSQ
Sbjct: 19 MDSQSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQ 78

Query: 70 GADIEILLT 79
          GA+  +LLT
Sbjct: 79 GAETAMLLT 87

[Close]

BLAST of MELO3C030244 vs. TAIR 10
Match: AT1G67950.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.5e-13
Identity = 31/69 (44.93%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 10 LKKRNNIEKMRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQ 69
          +  ++ +  ++TVK+SN+S    ++D+KE FSF G+I YV+M+ E++ +QV +VT+KDSQ
Sbjct: 19 MDSQSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQ 78

Query: 70 GADIEILLT 79
          GA+  +LLT
Sbjct: 79 GAETAMLLT 87

[Close]

BLAST of MELO3C030244 vs. TAIR 10
Match: AT1G67950.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.5e-13
Identity = 31/69 (44.93%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 10 LKKRNNIEKMRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQ 69
          +  ++ +  ++TVK+SN+S    ++D+KE FSF G+I YV+M+ E++ +QV +VT+KDSQ
Sbjct: 20 MDSQSTVSGVKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQ 79

Query: 70 GADIEILLT 79
          GA+  +LLT
Sbjct: 80 GAETAMLLT 88

[Close]

BLAST of MELO3C030244 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 32/60 (53.33%), Postives = 46/60 (76.67%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          M TVKVSN+S    +RD+KE FSF G+ILY++ Q E+E T++ +VT+KD QGA+  +LL+
Sbjct: 3  MTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLS 62

[Close]

BLAST of MELO3C030244 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 19 MRTVKVSNISKFTCERDIKELFSFYGEILYVKMQRESENTQVVFVTYKDSQGADIEILLT 78
          M TVKVSN+S    ERD+KE FSF G+I Y++ Q E++ +++ +VT+KD QGA+  +LLT
Sbjct: 3  MVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLT 62

The following BLAST results are available for this feature:

BLAST of MELO3C030244 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051959.1	3.1e-25	84.00	beta-galactosidase-like [Cucumis melo var. makuwa]	[more]
XP_023520015.1	1.4e-17	82.26	binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022941586.1	1.4e-17	82.26	binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]	[more]
XP_008452423.1	1.4e-17	85.00	PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]	[more]
XP_008452424.1	1.4e-17	85.00	PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo] >KAA0056831...	[more]

BLAST of MELO3C030244 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	7.5e-06	42.62	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of MELO3C030244 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UEN2	1.5e-25	84.00	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00...	[more]
A0A5A7UTK1	6.8e-18	85.00	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KIR7	6.8e-18	85.00	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G023900 PE=4 SV...	[more]
A0A6J1FLI4	6.8e-18	82.26	binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A1S3BT66	6.8e-18	85.00	binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034934...	[more]

BLAST of MELO3C030244 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67950.3	6.5e-13	44.93	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.1	6.5e-13	44.93	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.2	6.5e-13	44.93	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	2.5e-12	53.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	1.6e-11	51.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 23..72 e-value: 3.6E-6 score: 26.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..99 score: 9.609751
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..76 e-value: 1.4E-9 score: 39.8
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 13..78
None	No IPR available	PANTHER	PTHR32343:SF29	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 13..78
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 7..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030244.1	MELO3C030244.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding