MELO3C030223.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGACGAGCTTGCCAAAGAAATTTTCAGTGATTGGGAGTTGCGTAATAAGTAGCACGGGTAATTGAATTAGTAGTTCAGTGTTTATGCTTAGTTTAATTGTTAATAATACCCCATTTACTTGTTTTTCCACGGTGTTTCTTTTAGCGAATGCATTTGTTTATCGACGATATGACACACTGGCAATTCACTAGAAGCACAATGTATTATGTTATTATGTGGTTTTTTCTAAGCGAAACTTCGTTTACTAATATGATTGCCTTTTTTTTAGTATGACAAGTTCTTCAAAGGCCCCGAAGTACTTATGGACAAAAGAGGAGGAGTCCACCCTCGTCGAGTGTCTGATGGAGTTGGTCAGCACCAGCAGTTGGAGGTTCGACAACGGGATCTTTAAACCCGAGTACCATAGTCAGCTTGCAAGAATGGTGGCTCAAAAGATGTCAAGACGTAACAACTAG ATGGAGGGACGAGCTTGCCAAAGAAATTTTCATATGACAAGTTCTTCAAAGGCCCCGAAGTACTTATGGACAAAAGAGGAGGAGTCCACCCTCGTCGAGTGTCTGATGGAGTTGGTCAGCACCAGCAGTTGGAGGTTCGACAACGGGATCTTTAAACCCGAGTACCATAGTCAGCTTGCAAGAATGGTGGCTCAAAAGATGTCAAGACGTAACAACTAG ATGGAGGGACGAGCTTGCCAAAGAAATTTTCATATGACAAGTTCTTCAAAGGCCCCGAAGTACTTATGGACAAAAGAGGAGGAGTCCACCCTCGTCGAGTGTCTGATGGAGTTGGTCAGCACCAGCAGTTGGAGGTTCGACAACGGGATCTTTAAACCCGAGTACCATAGTCAGCTTGCAAGAATGGTGGCTCAAAAGATGTCAAGACGTAACAACTAG MEGRACQRNFHMTSSSKAPKYLWTKEEESTLVECLMELVSTSSWRFDNGIFKPEYHSQLARMVAQKMSRRNN Homology
BLAST of MELO3C030223.jh1 vs. NCBI nr
Match: KAA0034973.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK26996.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 122 bits (306), Expect = 7.06e-34 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. NCBI nr
Match: TYK24214.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 4.89e-22 Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. NCBI nr
Match: KAA0053618.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 8.48e-18 Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. NCBI nr
Match: KAA0057257.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK18706.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 1.39e-17 Identity = 34/56 (60.71%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. NCBI nr
Match: KAA0053179.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.1 bits (196), Expect = 1.46e-17 Identity = 33/56 (58.93%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DTI1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00720 PE=4 SV=1) HSP 1 Score: 122 bits (306), Expect = 3.42e-34 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DKT3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00160 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.37e-22 Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UEX3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10848G00010 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 4.11e-18 Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. ExPASy TrEMBL
Match: A0A5A7URI5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00060 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 6.73e-18 Identity = 34/56 (60.71%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of MELO3C030223.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UI78 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24297G00010 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.08e-18 Identity = 33/56 (58.93%), Postives = 47/56 (83.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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