MELO3C030199 (gene) Melon (DHL92) v4

Overview
NameMELO3C030199
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionWW domain-containing protein
Locationchr03: 15673616 .. 15674040 (-)
RNA-Seq ExpressionMELO3C030199
SyntenyMELO3C030199
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGCATGTTTCGGTGTATATATATCACAAAAACATTAGAAAAATGGAAGACTTTTTCTTTCTCCTTGTTTTCTCTTGAATTACAAACATCAATATTTTTATTAATATTTGTTGAATGACATATTTTTTGTTTTAATGTTGGATATGGAAGTTCCTGAGTTGTCTTTGGCTCCAACAAGGCAGTTTGTGAAATGTGATGAGATGAATTCTTCATCATCAAAACATTTAGTAGAAATTAGCAGCCAATGTTCTAGGAAGAGGAAGCTTCTTCTACATGATCATCATCACATTATTAAGTCTCAAACAAGTGTTGATCTTCAACTCAAAGATCCTCTTCCTCTTCATTGGGAGCAATGTCTTGACCTTCAGGTCTCTCTCTCACTGTTTTCTTTTCTTAAATTTCATATTTTTAGAATATGACATGA

mRNA sequence

CTTGCATGTTTCGGTGTATATATATCACAAAAACATTAGAAAAATGGAAGACTTTTTCTTTCTCCTTGTTTTCTCTTGAATTACAAACATCAATATTTTTATTAATATTTGTTGAATGACATATTTTTTGTTTTAATGTTGGATATGGAAGTTCCTGAGTTGTCTTTGGCTCCAACAAGGCAGTTTGTGAAATGTGATGAGATGAATTCTTCATCATCAAAACATTTAGTAGAAATTAGCAGCCAATGTTCTAGGAAGAGGAAGCTTCTTCTACATGATCATCATCACATTATTAAGTCTCAAACAAGTGTTGATCTTCAACTCAAAGATCCTCTTCCTCTTCATTGGGAGCAATGTCTTGACCTTCAGAATATGACATGA

Coding sequence (CDS)

ATGTTGGATATGGAAGTTCCTGAGTTGTCTTTGGCTCCAACAAGGCAGTTTGTGAAATGTGATGAGATGAATTCTTCATCATCAAAACATTTAGTAGAAATTAGCAGCCAATGTTCTAGGAAGAGGAAGCTTCTTCTACATGATCATCATCACATTATTAAGTCTCAAACAAGTGTTGATCTTCAACTCAAAGATCCTCTTCCTCTTCATTGGGAGCAATGTCTTGACCTTCAGAATATGACATGA

Protein sequence

MLDMEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHIIKSQTSVDLQLKDPLPLHWEQCLDLQNMT
Homology
BLAST of MELO3C030199 vs. NCBI nr
Match: XP_011656508.1 (uncharacterized protein LOC105435750 isoform X2 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 5.3e-34
Identity = 75/79 (94.94%), Postives = 76/79 (96.20%), Query Frame = 0

Query: 1  MLDMEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHIIKSQTSVD 60
          MLDME PELSLAPTRQFVK DEMNSSSSKHLVEISSQCSRKRKLLLHDHHH IKSQTSVD
Sbjct: 1  MLDMEFPELSLAPTRQFVKSDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHFIKSQTSVD 60

Query: 61 LQLKDPLPLHWEQCLDLQN 80
          LQLKDPLPLHWEQCLDLQ+
Sbjct: 61 LQLKDPLPLHWEQCLDLQS 79

BLAST of MELO3C030199 vs. NCBI nr
Match: XP_011656507.1 (uncharacterized protein LOC105435750 isoform X1 [Cucumis sativus] >KAE8646605.1 hypothetical protein Csa_005473 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 9.0e-34
Identity = 75/78 (96.15%), Postives = 75/78 (96.15%), Query Frame = 0

Query: 1  MLDMEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHIIKSQTSVD 60
          MLDME PELSLAPTRQFVK DEMNSSSSKHLVEISSQCSRKRKLLLHDHHH IKSQTSVD
Sbjct: 1  MLDMEFPELSLAPTRQFVKSDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHFIKSQTSVD 60

Query: 61 LQLKDPLPLHWEQCLDLQ 79
          LQLKDPLPLHWEQCLDLQ
Sbjct: 61 LQLKDPLPLHWEQCLDLQ 78

BLAST of MELO3C030199 vs. NCBI nr
Match: XP_038886191.1 (uncharacterized protein LOC120076436 isoform X2 [Benincasa hispida])

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 68/79 (86.08%), Postives = 71/79 (89.87%), Query Frame = 0

Query: 1  MLDMEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHIIKSQTSVD 60
          +LDMEVPELSLAPT QFVK DEMNSSS K LVEIS+ CSRKRKLL HDH H IKSQTSVD
Sbjct: 7  LLDMEVPELSLAPTTQFVKGDEMNSSSKK-LVEISNTCSRKRKLLHHDHQHYIKSQTSVD 66

Query: 61 LQLKDPLPLHWEQCLDLQN 80
          LQLKDPLPLHWEQCLDLQ+
Sbjct: 67 LQLKDPLPLHWEQCLDLQS 84

BLAST of MELO3C030199 vs. NCBI nr
Match: XP_038886190.1 (uncharacterized protein LOC120076436 isoform X1 [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27
Identity = 68/78 (87.18%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 1  MLDMEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHIIKSQTSVD 60
          +LDMEVPELSLAPT QFVK DEMNSSS K LVEIS+ CSRKRKLL HDH H IKSQTSVD
Sbjct: 7  LLDMEVPELSLAPTTQFVKGDEMNSSSKK-LVEISNTCSRKRKLLHHDHQHYIKSQTSVD 66

Query: 61 LQLKDPLPLHWEQCLDLQ 79
          LQLKDPLPLHWEQCLDLQ
Sbjct: 67 LQLKDPLPLHWEQCLDLQ 83

BLAST of MELO3C030199 vs. NCBI nr
Match: XP_023548823.1 (uncharacterized protein LOC111807358 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19
Identity = 58/79 (73.42%), Postives = 64/79 (81.01%), Query Frame = 0

Query: 4  MEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHH---HIIKSQTSVD 63
          ME P LSLAPT QF+K D++NSSS+K L + SS CSRKRKLLLH HH   H I SQTSVD
Sbjct: 1  MEAPHLSLAPT-QFIKTDDINSSSNK-LQQTSSSCSRKRKLLLHHHHSYPHHINSQTSVD 60

Query: 64 LQLKDPLPLHWEQCLDLQN 80
          LQLKDPLPL WEQCLDLQ+
Sbjct: 61 LQLKDPLPLDWEQCLDLQS 77

BLAST of MELO3C030199 vs. ExPASy TrEMBL
Match: A0A0A0K842 (WW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G023890 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-34
Identity = 75/79 (94.94%), Postives = 76/79 (96.20%), Query Frame = 0

Query: 1  MLDMEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHIIKSQTSVD 60
          MLDME PELSLAPTRQFVK DEMNSSSSKHLVEISSQCSRKRKLLLHDHHH IKSQTSVD
Sbjct: 1  MLDMEFPELSLAPTRQFVKSDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHFIKSQTSVD 60

Query: 61 LQLKDPLPLHWEQCLDLQN 80
          LQLKDPLPLHWEQCLDLQ+
Sbjct: 61 LQLKDPLPLHWEQCLDLQS 79

BLAST of MELO3C030199 vs. ExPASy TrEMBL
Match: A0A6J1EVH5 (uncharacterized protein LOC111436347 OS=Cucurbita moschata OX=3662 GN=LOC111436347 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-19
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0

Query: 4  MEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHH---HIIKSQTSVD 63
          ME P LSLAPT QF+K D++NSSS+K L + +S CSRKRKLLLH HH   H I SQTSVD
Sbjct: 1  MEAPHLSLAPT-QFMKTDDINSSSNK-LQQTNSSCSRKRKLLLHHHHPYPHHINSQTSVD 60

Query: 64 LQLKDPLPLHWEQCLDLQN 80
          LQLKDPLPL WEQCLDLQ+
Sbjct: 61 LQLKDPLPLDWEQCLDLQS 77

BLAST of MELO3C030199 vs. ExPASy TrEMBL
Match: A0A6J1JVM3 (uncharacterized protein LOC111488725 OS=Cucurbita maxima OX=3661 GN=LOC111488725 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.2e-19
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 0

Query: 4  MEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHH---HIIKSQTSVD 63
          M+ P LSLAPT QF+K D++NSSS+K L + +S CSRKRKLLLH HH   H I SQTSVD
Sbjct: 1  MDAPRLSLAPT-QFMKSDDINSSSNK-LQQTNSSCSRKRKLLLHHHHPYPHHINSQTSVD 60

Query: 64 LQLKDPLPLHWEQCLDLQN 80
          LQLKDPLPL WEQCLDLQ+
Sbjct: 61 LQLKDPLPLDWEQCLDLQS 77

BLAST of MELO3C030199 vs. ExPASy TrEMBL
Match: A0A6J1D9E4 (uncharacterized protein LOC111018581 OS=Momordica charantia OX=3673 GN=LOC111018581 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.2e-13
Identity = 53/83 (63.86%), Postives = 59/83 (71.08%), Query Frame = 0

Query: 4  MEVPELSLAPTRQFVKCDE------MNSSSSKHLVEISSQCSRKRKLL-LHDHHHIIKSQ 63
          MEVPELSLAPT+ FVK  +      M SSS + LVE S  CS+KRKLL LHDH      +
Sbjct: 1  MEVPELSLAPTK-FVKISDDDDEMMMMSSSPQKLVE-SKSCSKKRKLLVLHDH------K 60

Query: 64 TSVDLQLKDPLPLHWEQCLDLQN 80
           SVDLQLKDPLPL WEQCLDLQ+
Sbjct: 61 ASVDLQLKDPLPLDWEQCLDLQS 75

BLAST of MELO3C030199 vs. ExPASy TrEMBL
Match: A0A5E4G781 (PREDICTED: vesicle transport OS=Prunus dulcis OX=3755 GN=ALMOND_2B025188 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.8e-11
Identity = 44/82 (53.66%), Postives = 54/82 (65.85%), Query Frame = 0

Query: 2   LDMEVPELSLAPTRQFVKCDEMNSSSSKHLVEISSQCSRKRKLLLHDHHHIIKS----QT 61
           L ME+PELSLAPT+  V   +  + S+  L    S  SRKRKL     H ++K+    QT
Sbjct: 214 LSMELPELSLAPTQAHVVFKKSINGSNNPLESAESNTSRKRKLF--QDHQLLKTEASFQT 273

Query: 62  SVDLQLKDPLPLHWEQCLDLQN 80
           SVDLQLKDPLPL WEQCLDL++
Sbjct: 274 SVDLQLKDPLPLDWEQCLDLES 293

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011656508.15.3e-3494.94uncharacterized protein LOC105435750 isoform X2 [Cucumis sativus][more]
XP_011656507.19.0e-3496.15uncharacterized protein LOC105435750 isoform X1 [Cucumis sativus] >KAE8646605.1 ... [more]
XP_038886191.11.3e-2786.08uncharacterized protein LOC120076436 isoform X2 [Benincasa hispida][more]
XP_038886190.11.6e-2787.18uncharacterized protein LOC120076436 isoform X1 [Benincasa hispida][more]
XP_023548823.11.3e-1973.42uncharacterized protein LOC111807358 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K8422.6e-3494.94WW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G023890 PE=4 SV=... [more]
A0A6J1EVH52.3e-1972.15uncharacterized protein LOC111436347 OS=Cucurbita moschata OX=3662 GN=LOC1114363... [more]
A0A6J1JVM35.2e-1970.89uncharacterized protein LOC111488725 OS=Cucurbita maxima OX=3661 GN=LOC111488725... [more]
A0A6J1D9E47.2e-1363.86uncharacterized protein LOC111018581 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A5E4G7816.8e-1153.66PREDICTED: vesicle transport OS=Prunus dulcis OX=3755 GN=ALMOND_2B025188 PE=4 SV... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14791BOMB/KIRA PROTEINScoord: 4..78
NoneNo IPR availablePANTHERPTHR14791:SF39SUBFAMILY NOT NAMEDcoord: 4..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030199.1MELO3C030199.1mRNA