MELO3C030160 (gene) Melon (DHL92) v4

Overview
NameMELO3C030160
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Locationchr03: 12794603 .. 12795425 (-)
RNA-Seq ExpressionMELO3C030160
SyntenyMELO3C030160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGACAATGCGGGTGAGTCTAAGAATTTCCTTCATTTAGGATTATTTCATGTTTTTTTTCTCTGACATTATTTGTTATTATAATTTATTGAGCAGGGTCGTCTTCTCAACCACCTGTGACTCCAACTCCAAGGAAACGTGCGCAGTCTCGACTCTTAGAGTTGGAGCGCCATGTTGCAATCAATGGGTGCATTCTAATGACGATCGCCCCTGGAGTGGAGAAGTGTATTTTCCCACACGCCATTCGTTTCAGCCAGGTGATATGCGTACGAAAGACATTTTCCATCCGCTGCCTTAAGTGGGCGAACGTTGGCAGAAAATATGTTGAGGTCGTTAAGGGCGACCTTCAGGTAATTAAGTCCACTACATATTTATGATTTCATTTGAAATATATCTAAGTTAACCAATTTAATGTGTTATTTTTGTAATGTGTAGCGGTTCTTTGTGCTTAATTTCAATGCTCAAGCAAAGAATAGGTTTTTTGAGCATCAGATGCTCACCACCTTTAAAGATTTTCGAGCTGACTGTCACTAACACTTCAAAAAGTATAGCGAGCTCGAGAAGGCTCGTGCCAACCCACCAAACGTATTGGTTGGACGTCATGAGGATTGGCACTTCCTCTGCGACCACTACATGAGCAGTGTATTTCAGGTATTTTTCATTCTTAATTATGATTTCAACTTTTAATATGTATAAGAAATAAACAATATAATTATTTTTATGTAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATTATAGCAGCGAGTCAAAGTCGTTTCTACGATGATAGCATGACACGA

mRNA sequence

ATGGGCGACAATGCGGGGTCGTCTTCTCAACCACCTGTGACTCCAACTCCAAGGAAACGTGCGCAGTCTCGACTCTTAGAGTTGGAGCGCCATGTTGCAATCAATGGGTGCATTCTAATGACGATCGCCCCTGGAGTGGAGAAGTGTATTTTCCCACACGCCATTCGTTTCAGCCAGGTGATATGCGTACGAAAGACATTTTCCATCCGCTGCCTTAAGTGGGCGAACGTTGGCAGAAAATATGTTGAGGTCGTTAAGGGCGACCTTCAGCGGTTCTTTGTGCTTAATTTCAATGCTCAAGCAAAGAATAGCGAGCTCGAGAAGGCTCGTGCCAACCCACCAAACGTATTGGTTGGACGTCATGAGGATTGGCACTTCCTCTGCGACCACTACATGAGCAGTGTATTTCAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATTATAGCAGCGAGTCAAAGTCGTTTCTACGATGATAGCATGACACGA

Coding sequence (CDS)

ATGGGCGACAATGCGGGGTCGTCTTCTCAACCACCTGTGACTCCAACTCCAAGGAAACGTGCGCAGTCTCGACTCTTAGAGTTGGAGCGCCATGTTGCAATCAATGGGTGCATTCTAATGACGATCGCCCCTGGAGTGGAGAAGTGTATTTTCCCACACGCCATTCGTTTCAGCCAGGTGATATGCGTACGAAAGACATTTTCCATCCGCTGCCTTAAGTGGGCGAACGTTGGCAGAAAATATGTTGAGGTCGTTAAGGGCGACCTTCAGCGGTTCTTTGTGCTTAATTTCAATGCTCAAGCAAAGAATAGCGAGCTCGAGAAGGCTCGTGCCAACCCACCAAACGTATTGGTTGGACGTCATGAGGATTGGCACTTCCTCTGCGACCACTACATGAGCAGTGTATTTCAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATTATAGCAGCGAGTCAAAGTCGTTTCTACGATGA

Protein sequence

MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQVICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVGRHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR
Homology
BLAST of MELO3C030160 vs. NCBI nr
Match: TYK05151.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 335.1 bits (858), Expect = 3.4e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 1   MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 60
           MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV
Sbjct: 19  MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 78

Query: 61  ICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVGR 120
           ICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVGR
Sbjct: 79  ICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVGR 138

Query: 121 HEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 164
           HEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR
Sbjct: 139 HEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 181

BLAST of MELO3C030160 vs. NCBI nr
Match: KAA0063985.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 8.3e-87
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0

Query: 1   MGDN-AGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQ 60
           MGDN AGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQ
Sbjct: 19  MGDNAAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQ 78

Query: 61  VICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVG 120
           VICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVG
Sbjct: 79  VICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVG 138

Query: 121 RHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 164
           RHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR
Sbjct: 139 RHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 182

BLAST of MELO3C030160 vs. NCBI nr
Match: KAA0045294.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 4.4e-64
Identity = 125/165 (75.76%), Postives = 140/165 (84.85%), Query Frame = 0

Query: 1   MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 60
           +GDN   SS   +TPTPR+RAQSRLLELERHVAING I MTIAPG EK I PHA+RFSQ 
Sbjct: 24  VGDNTAGSSSQQMTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQT 83

Query: 61  I--CVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLV 120
           I  CVRKTF +RCLKWA+VGR+Y+EVVKGDLQR FVL+FN Q  N++ E+ARANPPN LV
Sbjct: 84  IGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQTMNNDPEEARANPPNALV 143

Query: 121 GRHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 164
           GR EDWHFLCDHY+S  FQEQSRTNKAARQKQPYN+SS SKSFL+
Sbjct: 144 GRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQ 188

BLAST of MELO3C030160 vs. NCBI nr
Match: KAA0066435.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 2.4e-62
Identity = 124/165 (75.15%), Postives = 137/165 (83.03%), Query Frame = 0

Query: 1   MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 60
           +GDN   SS    TPTPR+RAQSRLLELERHVAING I MTIAPG EK I PHA+RFSQ 
Sbjct: 24  VGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQT 83

Query: 61  I--CVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLV 120
           I  CVRKTF +R LKWA+VGR+Y+EVVKGDLQR FVL+FN QA  S+ E+ARANPPN LV
Sbjct: 84  IGVCVRKTFPVRYLKWADVGREYIEVVKGDLQRLFVLDFNDQAMKSDPEEARANPPNALV 143

Query: 121 GRHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 164
           GR EDWHFLCDHY+S  FQEQSRTNKA RQKQPYN+SS SKSFL+
Sbjct: 144 GRDEDWHFLCDHYISRAFQEQSRTNKAVRQKQPYNHSSGSKSFLQ 188

BLAST of MELO3C030160 vs. NCBI nr
Match: TYK17077.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-61
Identity = 130/190 (68.42%), Postives = 143/190 (75.26%), Query Frame = 0

Query: 1   MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 60
           +GDN GSSSQ   TPTPR+RAQSRLLELERHVAING I MTIAPG EK I PHA+RFSQ 
Sbjct: 25  VGDNTGSSSQ-QTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQA 84

Query: 61  I--CVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKN--------------- 120
           I  CVRKTF +RCLKW +VGR+Y+EVVKGDLQRFFVL+FN QA N               
Sbjct: 85  IGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFR 144

Query: 121 ----------SELEKARANPPNVLVGRHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYN 164
                     S+ E+ARANPPN LVGR EDWHFLCDHY+S  FQEQSRTNKAARQKQPYN
Sbjct: 145 ADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYN 204

BLAST of MELO3C030160 vs. ExPASy TrEMBL
Match: A0A5D3BZQ1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00030 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.6e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 1   MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 60
           MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV
Sbjct: 19  MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 78

Query: 61  ICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVGR 120
           ICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVGR
Sbjct: 79  ICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVGR 138

Query: 121 HEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 164
           HEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR
Sbjct: 139 HEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 181

BLAST of MELO3C030160 vs. ExPASy TrEMBL
Match: A0A5A7VDM9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G001510 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.0e-87
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0

Query: 1   MGDN-AGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQ 60
           MGDN AGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQ
Sbjct: 19  MGDNAAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQ 78

Query: 61  VICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVG 120
           VICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVG
Sbjct: 79  VICVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLVG 138

Query: 121 RHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 164
           RHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR
Sbjct: 139 RHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 182

BLAST of MELO3C030160 vs. ExPASy TrEMBL
Match: A0A5A7TQ98 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00520 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64
Identity = 125/165 (75.76%), Postives = 140/165 (84.85%), Query Frame = 0

Query: 1   MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 60
           +GDN   SS   +TPTPR+RAQSRLLELERHVAING I MTIAPG EK I PHA+RFSQ 
Sbjct: 24  VGDNTAGSSSQQMTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQT 83

Query: 61  I--CVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLV 120
           I  CVRKTF +RCLKWA+VGR+Y+EVVKGDLQR FVL+FN Q  N++ E+ARANPPN LV
Sbjct: 84  IGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQTMNNDPEEARANPPNALV 143

Query: 121 GRHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 164
           GR EDWHFLCDHY+S  FQEQSRTNKAARQKQPYN+SS SKSFL+
Sbjct: 144 GRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQ 188

BLAST of MELO3C030160 vs. ExPASy TrEMBL
Match: A0A5A7VL07 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005270 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 124/165 (75.15%), Postives = 137/165 (83.03%), Query Frame = 0

Query: 1   MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 60
           +GDN   SS    TPTPR+RAQSRLLELERHVAING I MTIAPG EK I PHA+RFSQ 
Sbjct: 24  VGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQT 83

Query: 61  I--CVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKNSELEKARANPPNVLV 120
           I  CVRKTF +R LKWA+VGR+Y+EVVKGDLQR FVL+FN QA  S+ E+ARANPPN LV
Sbjct: 84  IGVCVRKTFPVRYLKWADVGREYIEVVKGDLQRLFVLDFNDQAMKSDPEEARANPPNALV 143

Query: 121 GRHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYNYSSESKSFLR 164
           GR EDWHFLCDHY+S  FQEQSRTNKA RQKQPYN+SS SKSFL+
Sbjct: 144 GRDEDWHFLCDHYISRAFQEQSRTNKAVRQKQPYNHSSGSKSFLQ 188

BLAST of MELO3C030160 vs. ExPASy TrEMBL
Match: A0A5D3CZD0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00260 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 9.9e-62
Identity = 130/190 (68.42%), Postives = 143/190 (75.26%), Query Frame = 0

Query: 1   MGDNAGSSSQPPVTPTPRKRAQSRLLELERHVAINGCILMTIAPGVEKCIFPHAIRFSQV 60
           +GDN GSSSQ   TPTPR+RAQSRLLELERHVAING I MTIAPG EK I PHA+RFSQ 
Sbjct: 25  VGDNTGSSSQ-QTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQA 84

Query: 61  I--CVRKTFSIRCLKWANVGRKYVEVVKGDLQRFFVLNFNAQAKN--------------- 120
           I  CVRKTF +RCLKW +VGR+Y+EVVKGDLQRFFVL+FN QA N               
Sbjct: 85  IGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFR 144

Query: 121 ----------SELEKARANPPNVLVGRHEDWHFLCDHYMSSVFQEQSRTNKAARQKQPYN 164
                     S+ E+ARANPPN LVGR EDWHFLCDHY+S  FQEQSRTNKAARQKQPYN
Sbjct: 145 ADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYN 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK05151.13.4e-88100.00CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0063985.18.3e-8799.39CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0045294.14.4e-6475.76CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0066435.12.4e-6275.15CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK17077.12.1e-6168.42CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BZQ11.6e-88100.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7VDM94.0e-8799.39CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7TQ982.1e-6475.76CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7VL071.2e-6275.15CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3CZD09.9e-6268.42CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030160.1MELO3C030160.1mRNA