MELO3C030101 (gene) Melon (DHL92) v4

Overview
NameMELO3C030101
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGirdin-like
Locationchr08: 29540180 .. 29540405 (-)
RNA-Seq ExpressionMELO3C030101
SyntenyMELO3C030101
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTTGATTATGATCTGCAAACGAGAGATTTCCAAGTGCTAGTGGAACATGTAGATCAGACAATCGAATTTCTCAGAATGGTGTCCAAAAGAGCAAATGGTTTTGCGTAATGGGCAACTGATTTGAGAGTTAATTTTTTCTCAATGCAACTCATGCAGATGATCTAAATAGATTCTTGAAGATGATATGCAGAAACTGGGGACATTTTGGCGTTTTCATTAA

mRNA sequence

ATGAAGGTTGATTATGATCTGCAAACGAGAGATTTCCAAGTGCTAGTGGAACATGTAGATCAGACAATCGAATTTCTCAGAATGGTGTCCAAAAGAGCAAATGGTTTTGCGTAATGGGCAACTGATTTGAGAGTTAATTTTTTCTCAATGCAACTCATGCAGATGATCTAAATAGATTCTTGAAGATGATATGCAGAAACTGGGGACATTTTGGCGTTTTCATTAA

Coding sequence (CDS)

ATGAAGGTTGATTATGATCTGCAAACGAGAGATTTCCAAGTGCTAGTGGAACATGTAGATCAGACAATCGAATTTCTCAGAATGGTGTCCAAAAGAGCAAATGGTTTTGCGTAA

Protein sequence

MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA
Homology
[Close]
BLAST of MELO3C030101 vs. NCBI nr
Match: KAA0062685.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRMVSKRANGFA
Sbjct: 274 MKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFA 310

[Close]
BLAST of MELO3C030101 vs. NCBI nr
Match: KAA0037780.1 (girdin-like [Cucumis melo var. makuwa] >TYK27303.1 girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRMVSKRANGFA
Sbjct: 258 MKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFA 294

[Close]
BLAST of MELO3C030101 vs. NCBI nr
Match: TYK04062.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRMVSKRANGFA
Sbjct: 66  MKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFA 102

[Close]
BLAST of MELO3C030101 vs. NCBI nr
Match: TYK23632.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRMVSKRANGFA
Sbjct: 251 MKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFA 287

[Close]
BLAST of MELO3C030101 vs. NCBI nr
Match: TYK18656.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 9.2e-10
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRM+SKRANGFA
Sbjct: 299 MKVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFA 335

[Close]
BLAST of MELO3C030101 vs. ExPASy TrEMBL
Match: A0A5D3DUG2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00160 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRMVSKRANGFA
Sbjct: 258 MKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFA 294

[Close]
BLAST of MELO3C030101 vs. ExPASy TrEMBL
Match: A0A5D3DJ95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRMVSKRANGFA
Sbjct: 251 MKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFA 287

[Close]
BLAST of MELO3C030101 vs. ExPASy TrEMBL
Match: A0A5A7V9X6 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRMVSKRANGFA
Sbjct: 274 MKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFA 310

[Close]
BLAST of MELO3C030101 vs. ExPASy TrEMBL
Match: A0A5D3BYW3 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3019G00040 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRMVSKRANGFA
Sbjct: 66  MKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFA 102

[Close]
BLAST of MELO3C030101 vs. ExPASy TrEMBL
Match: A0A5D3D533 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.5e-10
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1   MKVDYDLQTRDFQVLVEHVDQTIEFLRMVSKRANGFA 38
           MKVDYDLQTRDFQVLVE VDQTIEFLRM+SKRANGFA
Sbjct: 299 MKVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFA 335

The following BLAST results are available for this feature:
BLAST of MELO3C030101 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062685.14.1e-1097.30girdin-like [Cucumis melo var. makuwa][more]
KAA0037780.14.1e-1097.30girdin-like [Cucumis melo var. makuwa] >TYK27303.1 girdin-like [Cucumis melo var... [more]
TYK04062.14.1e-1097.30girdin-like [Cucumis melo var. makuwa][more]
TYK23632.14.1e-1097.30girdin-like [Cucumis melo var. makuwa][more]
TYK18656.19.2e-1094.59girdin-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C030101 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030101 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DUG22.0e-1097.30Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00160 P... [more]
A0A5D3DJ952.0e-1097.30Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 P... [more]
A0A5A7V9X62.0e-1097.30Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 P... [more]
A0A5D3BYW32.0e-1097.30Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3019G00040 P... [more]
A0A5D3D5334.5e-1094.59Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE... [more]
BLAST of MELO3C030101 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030101.1MELO3C030101.1mRNA