MELO3C030100 (gene) Melon (DHL92) v4

Overview
NameMELO3C030100
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCoatomer, beta' subunit
Locationchr03: 25314072 .. 25316454 (-)
RNA-Seq ExpressionMELO3C030100
SyntenyMELO3C030100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAATGTCAGGTCTTTTACTTTTCCTTATTTGTTGAAGTACAGAGTGAATCCAAGTGGAAGCAGCTTGGTGAATTGGCTATGTCGATTGGAAAGGTTCCTTTCCTCATTTTGAACTGTTGCAAGCGCTCATTTTTTGTGTATGTCGATTGACATTTGTTTTCTTGATTTGTTCCTTTGTTTCATTTGCAGTTGGACATGGCCGAGGAATGTTTGAAGTATGCTGTAGATTATAGTGGTTTGTTATTGTTGTACTCTTCCCTAGGAGACGCTCAAGGCATATCACAACTTGCAACCCTTGCCAAGGAGCAAGGAAAGAACAACGTTGCATTCCTTTGTTTATTTGTGTTGGGTAAATTGGAAGACTGCCTTCAGTTGTTAGTAGAAAGGTAAAAAACAAGAAAAATCTTCTTGCACATCATCCTCATGTTGAATAAAGTTAATTTTATATTGTATAACTTAAAAAACATCCTCATGTTGAATAAAGTTAATTTTATATTGTATAACTTAAAAAACATACAATGTGTATGTATAATTTTTTGACAGTAATCGGATTCCAGAAGCTGCTTTGATGGTTCGATCTTATCTTCCAAGCAAGGTATCAGAGATAGTTGCAATTTGGAGGAAAGACCTGAGTAAGGTAAACTAGATGGTTACCTCTCTGTTGATGTTCTATTTATTTAAACTAGTTCATAACATGCGAGATGGATGTACAATTTATAGTTTATGGAAATTATGAAAATTTTGAAAATTTTAAGAGCAAAATAGGAAAACATTCTTTTCCATAACCCCATTTATAAAATAGGAACAAGAATTTTGATTTCTTTCTTTTTATACACGATTTGTACTAATTGTAAACTAAAGATTTTCAATCACTGAACCAATATTTGTAACACAATAGTATACTATGCATAATTAAGTATAAAGATATATAACAGTTACTCTTCATTGTCTAAAATAAGTTCTTGATTTTTTCAAAGCTTCGTTATGACATGGTTCCGTAGCTCCTTTACGAAGAACAAAACTTTTTAATCTTCATTATTTATAATGGTTTGAGTGTTCTAATTTATGGTATCACTTGCATCTTGATAATTTGAAAAGGACCATATTTGTATTGACAATGATTTTTAAATTATTTTTTATATTATGGATCGCAACCACACATATGTGAATGGATTCGCCAATTTAATTTATAGCTTTTACTTGGATAGTTGCCTCCTATTAGCATCAATTGTGCTTACTGGACCAAAAAACACTTTACATACTAACTGCTTCTCAAATTTCCATTAGTGAAGTTTTGGATTACAAGGTTTTTCTGTTTTGGTACCCCTATATAATTTACTGACTTCTACAAGTTCTTTACTTGTTAGTGAATTATTACCTAGTTGTGGCCATTTCCAATATGTATTCCTACCGCATAGGCCAAGAAAAACCAATCCAAAATTCTACTTTTGGCCATCAATTATTTGCTCTTTAATTAGCTTTTTTCTACACTTGGAAGTAGATCATACTCATTCTGAGAATGGGAAGATTGGATTTTTGTCTGTAAAAGTTGGATTGGAGTATTCTTTCTCAGGTTATAGATAGTGAACATATGAGAAATTAGATATTGATTATAGCTATATTGGTTATGGAGTTGTTTGCTGTTTTGCTTTGTAATGTGGTTATGTTGTTCAAATCAGATTCTTGTTTTTGATGGCTCTATTGTAATAATTGTTGTTTAGCCATAAGAACACCCAAGAGATATATTGTTTTCTTTTCTGTGTAATCAAGCAAATCACAAGCACCAAATAATATGTAGGAAATTGATGGTTCAAGTTCAAGCTTCAGTCAACTGTTTGGAATTGAAGGTATTATACAAAAAAGTTTATCTTACCATGTTTCTCAATTTTTTTTTTAGGAAGACTTGAATGAACAAGCTACAATATTATCTTGGTAAGACTGTTATGTGGTTGCACTTGGTTTAGAAATTTTTTTTGGTGGTGTTGTTTCAAATACTGTTTAACAATTTAGAAAAGCGAGAAGTTTAATTATGTGAAGAAAAACTGTTTTGTTGGTGACTTTATGTTTGGTTCTTTTGTTTGGCAATGAAAAGACTATTATGGTGGTAACTATTTCTCAAAATTTGACTTGGTTTTTGAAAAACATGAATAGAAAGTTAATAACAATTTGTTCATGGGAAGTTAACAAAATCTTGCCTTTGTTTGGAACTATCATATCATCCTCATTTTGATATTTTGATATTTCTACTAGCAACTAGGTCATAAGATTGTTACTTATCAATTCAACCATCTTGATGTCTTTTACAGGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTT

mRNA sequence

AGAAATGTCAGGTCTTTTACTTTTCCTTATTTGTTGAAGTACAGAGTGAATCCAAGTGGAAGCAGCTTGGTGAATTGGCTATGTCGATTGGAAAGTTGGACATGGCCGAGGAATGTTTGAAGTATGCTGTAGATTATAGTGGTTTGTTATTGTTGTACTCTTCCCTAGGAGACGCTCAAGGCATATCACAACTTGCAACCCTTGCCAAGGAGCAAGGAAAGAACAACGTTGCATTCCTTTGTTTATTTGTGTTGGGTAAATTGGAAGACTGCCTTCAGTTGTTAGTAGAAAGTAATCGGATTCCAGAAGCTGCTTTGATGGTTCGATCTTATCTTCCAAGCAAGGTATCAGAGATAGTTGCAATTTGGAGGAAAGACCTGAGTAAGGAAGACTTGAATGAACAAGCTACAATATTATCTTGGTAAGACTGTTATGTGGTTGCACTTGGTTTAGAAATTTTTTTTGGTGGTGTTGTTTCAAATACTGTTTAACAATTTAGAAAAGCGAGAAGTTTAATTATGTGAAGAAAAACTGTTTTGTTGGTGACTTTATGTTTGGTTCTTTTGTTTGGCAATGAAAAGACTATTATGGTGGTAACTATTTCTCAAAATTTGACTTGGTTTTTGAAAAACATGAATAGAAAGTTAATAACAATTTGTTCATGGGAAGTTAACAAAATCTTGCCTTTGTTTGGAACTATCATATCATCCTCATTTTGATATTTTGATATTTCTACTAGCAACTAGGTCATAAGATTGTTACTTATCAATTCAACCATCTTGATGTCTTTTACAGGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTT

Coding sequence (CDS)

ATGTCGATTGGAAAGTTGGACATGGCCGAGGAATGTTTGAAGTATGCTGTAGATTATAGTGGTTTGTTATTGTTGTACTCTTCCCTAGGAGACGCTCAAGGCATATCACAACTTGCAACCCTTGCCAAGGAGCAAGGAAAGAACAACGTTGCATTCCTTTGTTTATTTGTGTTGGGTAAATTGGAAGACTGCCTTCAGTTGTTAGTAGAAAGTAATCGGATTCCAGAAGCTGCTTTGATGGTTCGATCTTATCTTCCAAGCAAGGTATCAGAGATAGTTGCAATTTGGAGGAAAGACCTGAGTAAGGAAGACTTGAATGAACAAGCTACAATATTATCTTGGTAA

Protein sequence

MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGKLEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSKEDLNEQATILSW
Homology
[Close]
BLAST of MELO3C030100 vs. NCBI nr
Match: XP_016899939.1 (PREDICTED: coatomer subunit beta'-2-like [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 7.6e-55
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK
Sbjct: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSKEDLNEQATILSW 115
           LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSKEDLNEQATILSW
Sbjct: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSKEDLNEQATILSW 114

[Close]
BLAST of MELO3C030100 vs. NCBI nr
Match: XP_008447491.1 (PREDICTED: coatomer subunit beta'-2-like isoform X2 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVAIWRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. NCBI nr
Match: XP_004149846.1 (coatomer subunit beta'-2 isoform X1 [Cucumis sativus] >XP_031739285.1 coatomer subunit beta'-2 isoform X1 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVAIWRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. NCBI nr
Match: XP_008447490.1 (PREDICTED: coatomer subunit beta'-2-like isoform X1 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVAIWRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. NCBI nr
Match: XP_011651524.1 (coatomer subunit beta'-2 isoform X2 [Cucumis sativus] >KAE8650745.1 hypothetical protein Csa_017623 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVAIWRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. ExPASy Swiss-Prot
Match: Q9C827 (Coatomer subunit beta'-2 OS=Arabidopsis thaliana OX=3702 GN=At1g52360 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.4e-45
Identity = 90/102 (88.24%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKL MAEEC+KYA+D SGLLLLYSSLGDA+G+++LATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVA+WRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. ExPASy Swiss-Prot
Match: Q8L828 (Coatomer subunit beta'-3 OS=Arabidopsis thaliana OX=3702 GN=At3g15980 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.1e-43
Identity = 86/102 (84.31%), Postives = 96/102 (94.12%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKL +AE+C+KYA+D SGLLLLYSSLGDA+G+S+LA LAKEQGKNNVAFLCLF LG+
Sbjct: 679 MSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNVAFLCLFTLGR 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVA+WR+DLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSK 780

[Close]
BLAST of MELO3C030100 vs. ExPASy Swiss-Prot
Match: Q9CAA0 (Coatomer subunit beta'-1 OS=Arabidopsis thaliana OX=3702 GN=At1g79990 PE=2 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-41
Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKLDMAEEC+++A+D SGLLLLYSSLGDA G+ +LA LAKEQGKNNVAFLCLF+LG+
Sbjct: 678 MSSGKLDMAEECMRHAMDLSGLLLLYSSLGDADGMMKLAALAKEQGKNNVAFLCLFMLGQ 737

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           +EDCL LLVESNRIPEAALM RSYLPSKVSEIVA+WR DL+K
Sbjct: 738 VEDCLHLLVESNRIPEAALMARSYLPSKVSEIVALWRNDLTK 779

[Close]
BLAST of MELO3C030100 vs. ExPASy Swiss-Prot
Match: Q5VQ78 (Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0143900 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-41
Identity = 85/102 (83.33%), Postives = 92/102 (90.20%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKLDMAEECL  A D SGLLLLYSSLGDA+GI +LA+ AKE GKNNVAFLCLF+LGK
Sbjct: 679 MSTGKLDMAEECLVQAKDLSGLLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDC+QLL++SNRIPEAALM RSYLPSKVSEIVAIWR DLSK
Sbjct: 739 LEDCIQLLIDSNRIPEAALMARSYLPSKVSEIVAIWRNDLSK 780

[Close]
BLAST of MELO3C030100 vs. ExPASy Swiss-Prot
Match: Q6H8D5 (Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0209100 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.5e-40
Identity = 80/102 (78.43%), Postives = 93/102 (91.18%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKLDMAEECL +A+D SGLLLLYSSLGDA+G+++L ++AKEQGKNNVAFLC F+LGK
Sbjct: 679 MSTGKLDMAEECLLHAMDLSGLLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LE+CLQLL+ESNRIPEAALM RSYLPSKV EIV +W+KDL K
Sbjct: 739 LEECLQLLIESNRIPEAALMSRSYLPSKVPEIVTLWKKDLQK 780

[Close]
BLAST of MELO3C030100 vs. ExPASy TrEMBL
Match: A0A1S4DVC7 (coatomer subunit beta'-2-like OS=Cucumis melo OX=3656 GN=LOC103488562 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.7e-55
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK
Sbjct: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSKEDLNEQATILSW 115
           LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSKEDLNEQATILSW
Sbjct: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSKEDLNEQATILSW 114

[Close]
BLAST of MELO3C030100 vs. ExPASy TrEMBL
Match: A0A5A7UAX5 (Coatomer subunit beta'-2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00140 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.3e-47
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLF+LGK
Sbjct: 807 MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFMLGK 866

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVAIWRKDLSK
Sbjct: 867 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK 908

[Close]
BLAST of MELO3C030100 vs. ExPASy TrEMBL
Match: A0A0A0L8I6 (Coatomer subunit beta' OS=Cucumis sativus OX=3659 GN=Csa_3G516570 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.3e-47
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVAIWRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. ExPASy TrEMBL
Match: A0A1S3BIG1 (Coatomer subunit beta' OS=Cucumis melo OX=3656 GN=LOC103489926 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.3e-47
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVAIWRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. ExPASy TrEMBL
Match: A0A1S3BGZ7 (Coatomer subunit beta' OS=Cucumis melo OX=3656 GN=LOC103489926 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.3e-47
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVAIWRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. TAIR 10
Match: AT1G52360.1 (Coatomer, beta' subunit )

HSP 1 Score: 181.8 bits (460), Expect = 3.1e-46
Identity = 90/102 (88.24%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKL MAEEC+KYA+D SGLLLLYSSLGDA+G+++LATLAKEQGKNNVAFLCLF+LGK
Sbjct: 679 MSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLGK 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVA+WRKDLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK 780

[Close]
BLAST of MELO3C030100 vs. TAIR 10
Match: AT1G52360.2 (Coatomer, beta' subunit )

HSP 1 Score: 181.8 bits (460), Expect = 3.1e-46
Identity = 90/102 (88.24%), Postives = 98/102 (96.08%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKL MAEEC+KYA+D SGLLLLYSSLGDA+G+++LATLAKEQGKNNVAFLCLF+LGK
Sbjct: 723 MSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLGK 782

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVA+WRKDLSK
Sbjct: 783 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK 824

[Close]
BLAST of MELO3C030100 vs. TAIR 10
Match: AT3G15980.1 (Coatomer, beta' subunit )

HSP 1 Score: 175.3 bits (443), Expect = 2.9e-44
Identity = 86/102 (84.31%), Postives = 96/102 (94.12%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKL +AE+C+KYA+D SGLLLLYSSLGDA+G+S+LA LAKEQGKNNVAFLCLF LG+
Sbjct: 679 MSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNVAFLCLFTLGR 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVA+WR+DLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSK 780

[Close]
BLAST of MELO3C030100 vs. TAIR 10
Match: AT3G15980.2 (Coatomer, beta' subunit )

HSP 1 Score: 175.3 bits (443), Expect = 2.9e-44
Identity = 86/102 (84.31%), Postives = 96/102 (94.12%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKL +AE+C+KYA+D SGLLLLYSSLGDA+G+S+LA LAKEQGKNNVAFLCLF LG+
Sbjct: 679 MSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNVAFLCLFTLGR 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVA+WR+DLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSK 780

[Close]
BLAST of MELO3C030100 vs. TAIR 10
Match: AT3G15980.3 (Coatomer, beta' subunit )

HSP 1 Score: 175.3 bits (443), Expect = 2.9e-44
Identity = 86/102 (84.31%), Postives = 96/102 (94.12%), Query Frame = 0 

Query: 1   MSIGKLDMAEECLKYAVDYSGLLLLYSSLGDAQGISQLATLAKEQGKNNVAFLCLFVLGK 60
           MS GKL +AE+C+KYA+D SGLLLLYSSLGDA+G+S+LA LAKEQGKNNVAFLCLF LG+
Sbjct: 679 MSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNVAFLCLFTLGR 738

Query: 61  LEDCLQLLVESNRIPEAALMVRSYLPSKVSEIVAIWRKDLSK 103
           LEDCLQLLVESNRIPEAALM RSYLPSKVSEIVA+WR+DLSK
Sbjct: 739 LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSK 780

The following BLAST results are available for this feature:
BLAST of MELO3C030100 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016899939.17.6e-55100.00PREDICTED: coatomer subunit beta'-2-like [Cucumis melo][more]
XP_008447491.11.3e-4698.04PREDICTED: coatomer subunit beta'-2-like isoform X2 [Cucumis melo][more]
XP_004149846.11.3e-4698.04coatomer subunit beta'-2 isoform X1 [Cucumis sativus] >XP_031739285.1 coatomer s... [more]
XP_008447490.11.3e-4698.04PREDICTED: coatomer subunit beta'-2-like isoform X1 [Cucumis melo][more]
XP_011651524.11.3e-4698.04coatomer subunit beta'-2 isoform X2 [Cucumis sativus] >KAE8650745.1 hypothetical... [more]
BLAST of MELO3C030100 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C8274.4e-4588.24Coatomer subunit beta'-2 OS=Arabidopsis thaliana OX=3702 GN=At1g52360 PE=1 SV=1[more]
Q8L8284.1e-4384.31Coatomer subunit beta'-3 OS=Arabidopsis thaliana OX=3702 GN=At3g15980 PE=2 SV=1[more]
Q9CAA02.9e-4181.37Coatomer subunit beta'-1 OS=Arabidopsis thaliana OX=3702 GN=At1g79990 PE=2 SV=2[more]
Q5VQ782.9e-4183.33Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g014390... [more]
Q6H8D52.5e-4078.43Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g020910... [more]
BLAST of MELO3C030100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DVC73.7e-55100.00coatomer subunit beta'-2-like OS=Cucumis melo OX=3656 GN=LOC103488562 PE=4 SV=1[more]
A0A5A7UAX56.3e-4798.04Coatomer subunit beta'-2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0L8I66.3e-4798.04Coatomer subunit beta' OS=Cucumis sativus OX=3659 GN=Csa_3G516570 PE=3 SV=1[more]
A0A1S3BIG16.3e-4798.04Coatomer subunit beta' OS=Cucumis melo OX=3656 GN=LOC103489926 PE=3 SV=1[more]
A0A1S3BGZ76.3e-4798.04Coatomer subunit beta' OS=Cucumis melo OX=3656 GN=LOC103489926 PE=3 SV=1[more]
BLAST of MELO3C030100 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G52360.13.1e-4688.24Coatomer, beta' subunit [more]
AT1G52360.23.1e-4688.24Coatomer, beta' subunit [more]
AT3G15980.12.9e-4484.31Coatomer, beta' subunit [more]
AT3G15980.22.9e-4484.31Coatomer, beta' subunit [more]
AT3G15980.32.9e-4484.31Coatomer, beta' subunit [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006692Coatomer, WD associated regionPFAMPF04053Coatomer_WDADcoord: 2..85
e-value: 9.1E-23
score: 81.0
NoneNo IPR availableGENE3D1.25.40.470coord: 1..113
e-value: 4.5E-37
score: 129.9
NoneNo IPR availablePANTHERPTHR19876:SF45COATOMER SUBUNIT BETA'coord: 1..104
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030100.1MELO3C030100.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0030117 membrane coat
molecular_function GO:0005198 structural molecule activity