MELO3C029976 (gene) Melon (DHL92) v4

Overview
NameMELO3C029976
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionKinesin motor domain-containing protein
Locationchr03: 14959058 .. 14959287 (+)
RNA-Seq ExpressionMELO3C029976
SyntenyMELO3C029976
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCTCCACGAGCCTTTCTAGGTCCCCAAAACCTTTTACCATCTCGCCATTCTGCTCACGGAAGTCTCCGGGGTTGTCGTCGGCCTCCAGGCCGAACGGACGACCTACAACTCCTTCTTCAACAACGTCTTCGAGACCTCCGTCAAAGGTTTCGATTTCTCCGATGACAACTGCTAGTTGTAACCCGAGCCCTTCCACTCCTCCACTTGACCGTTTCTGTAACGA

mRNA sequence

ATGGCATCCTCCACGAGCCTTTCTAGGTCCCCAAAACCTTTTACCATCTCGCCATTCTGCTCACGGAAGTCTCCGGGGTTGTCGTCGGCCTCCAGGCCGAACGGACGACCTACAACTCCTTCTTCAACAACGTCTTCGAGACCTCCGTCAAAGGTTTCGATTTCTCCGATGACAACTGCTAGTTGTAACCCGAGCCCTTCCACTCCTCCACTTGACCGTTTCTGTAACGA

Coding sequence (CDS)

ATGGCATCCTCCACGAGCCTTTCTAGGTCCCCAAAACCTTTTACCATCTCGCCATTCTGCTCACGGAAGTCTCCGGGGTTGTCGTCGGCCTCCAGGCCGAACGGACGACCTACAACTCCTTCTTCAACAACGTCTTCGAGACCTCCGTCAAAGGTTTCGATTTCTCCGATGACAACTGCTAGTTGTAACCCGAGCCCTTCCACTCCTCCACTTGACCGTTTCTGTAAC

Protein sequence

MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTASCNPSPSTPPLDRFCN
Homology
BLAST of MELO3C029976 vs. NCBI nr
Match: XP_008466732.1 (PREDICTED: kinesin-related protein 4 isoform X1 [Cucumis melo] >KAA0055450.1 kinesin-related protein 4 isoform X1 [Cucumis melo var. makuwa] >TYK08932.1 kinesin-related protein 4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 6.7e-23
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTSLSRS +P TISPF SRKSPG+S ASRPNGRPTTPSST SSRPPSKVS+SPMTTA
Sbjct: 1  MASSTSLSRSQRPSTISPFRSRKSPGVSPASRPNGRPTTPSSTVSSRPPSKVSVSPMTTA 60

Query: 61 SCNPSPSTPPLDRF 75
          SCNPSPSTP LDRF
Sbjct: 61 SCNPSPSTPALDRF 74

BLAST of MELO3C029976 vs. NCBI nr
Match: XP_008447702.1 (PREDICTED: uncharacterized protein LOC103490113 [Cucumis melo])

HSP 1 Score: 114.8 bits (286), Expect = 3.3e-22
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTSLSRS +P TI PFCSRKS GLSSASRPNGRPTTPSST SSRPPSKVS+SPMTTA
Sbjct: 1  MASSTSLSRSQRPSTIFPFCSRKSLGLSSASRPNGRPTTPSSTASSRPPSKVSVSPMTTA 60

Query: 61 SCNPSPSTPPLDRF 75
          SCN SPSTP LDRF
Sbjct: 61 SCNLSPSTPQLDRF 74

BLAST of MELO3C029976 vs. NCBI nr
Match: KAA0061220.1 (kinesin-related protein 4 isoform X1 [Cucumis melo var. makuwa] >TYK06267.1 kinesin-related protein 4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTSLSRS +P TISPF SRKSPGLSSASRPNGRPTT SSTTSSRPPSKVS+SPMTTA
Sbjct: 1  MASSTSLSRSKRPSTISPFRSRKSPGLSSASRPNGRPTTTSSTTSSRPPSKVSVSPMTTA 60

Query: 61 SCNPSPSTPPLDRF 75
          SCNPSPS   LDRF
Sbjct: 61 SCNPSPSILSLDRF 74

BLAST of MELO3C029976 vs. NCBI nr
Match: XP_011657430.1 (kinesin-like protein KIN-7C, mitochondrial isoform X1 [Cucumis sativus] >KGN47711.1 hypothetical protein Csa_018287 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 6.9e-20
Identity = 60/73 (82.19%), Postives = 64/73 (87.67%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTS+SRS +P TISPF SRKSP LS ASRPNGRPTTPSST SSRPPSK S+SP+TTA
Sbjct: 1  MASSTSISRSQRPSTISPFRSRKSPALSPASRPNGRPTTPSSTASSRPPSKFSVSPVTTA 60

Query: 61 SCNPSPSTPPLDR 74
          SC PSPSTP LDR
Sbjct: 61 SCTPSPSTPALDR 73

BLAST of MELO3C029976 vs. NCBI nr
Match: XP_023549534.1 (kinesin-like protein KIN-7C, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.6 bits (257), Expect = 7.7e-19
Identity = 59/73 (80.82%), Postives = 62/73 (84.93%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTS+SRS +P  ISPF SRKSP  S A RPNGRPTTPSST SSRPPSKVS+SPMTTA
Sbjct: 1  MASSTSISRSQRPSNISPFRSRKSPVASPAPRPNGRPTTPSSTASSRPPSKVSVSPMTTA 60

Query: 61 SCNPSPSTPPLDR 74
          SC PSPSTP LDR
Sbjct: 61 SCTPSPSTPALDR 73

BLAST of MELO3C029976 vs. ExPASy TrEMBL
Match: A0A5A7UJS8 (Kinesin-related protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00200 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTSLSRS +P TISPF SRKSPG+S ASRPNGRPTTPSST SSRPPSKVS+SPMTTA
Sbjct: 1  MASSTSLSRSQRPSTISPFRSRKSPGVSPASRPNGRPTTPSSTVSSRPPSKVSVSPMTTA 60

Query: 61 SCNPSPSTPPLDRF 75
          SCNPSPSTP LDRF
Sbjct: 61 SCNPSPSTPALDRF 74

BLAST of MELO3C029976 vs. ExPASy TrEMBL
Match: A0A1S3CS43 (kinesin-related protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504074 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTSLSRS +P TISPF SRKSPG+S ASRPNGRPTTPSST SSRPPSKVS+SPMTTA
Sbjct: 1  MASSTSLSRSQRPSTISPFRSRKSPGVSPASRPNGRPTTPSSTVSSRPPSKVSVSPMTTA 60

Query: 61 SCNPSPSTPPLDRF 75
          SCNPSPSTP LDRF
Sbjct: 61 SCNPSPSTPALDRF 74

BLAST of MELO3C029976 vs. ExPASy TrEMBL
Match: A0A1S3BI12 (uncharacterized protein LOC103490113 OS=Cucumis melo OX=3656 GN=LOC103490113 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-22
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTSLSRS +P TI PFCSRKS GLSSASRPNGRPTTPSST SSRPPSKVS+SPMTTA
Sbjct: 1  MASSTSLSRSQRPSTIFPFCSRKSLGLSSASRPNGRPTTPSSTASSRPPSKVSVSPMTTA 60

Query: 61 SCNPSPSTPPLDRF 75
          SCN SPSTP LDRF
Sbjct: 61 SCNLSPSTPQLDRF 74

BLAST of MELO3C029976 vs. ExPASy TrEMBL
Match: A0A5D3C380 (Kinesin-related protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00480 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.1e-22
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTSLSRS +P TISPF SRKSPGLSSASRPNGRPTT SSTTSSRPPSKVS+SPMTTA
Sbjct: 1  MASSTSLSRSKRPSTISPFRSRKSPGLSSASRPNGRPTTTSSTTSSRPPSKVSVSPMTTA 60

Query: 61 SCNPSPSTPPLDRF 75
          SCNPSPS   LDRF
Sbjct: 61 SCNPSPSILSLDRF 74

BLAST of MELO3C029976 vs. ExPASy TrEMBL
Match: A0A0A0KIV7 (Kinesin motor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382990 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-20
Identity = 60/73 (82.19%), Postives = 64/73 (87.67%), Query Frame = 0

Query: 1  MASSTSLSRSPKPFTISPFCSRKSPGLSSASRPNGRPTTPSSTTSSRPPSKVSISPMTTA 60
          MASSTS+SRS +P TISPF SRKSP LS ASRPNGRPTTPSST SSRPPSK S+SP+TTA
Sbjct: 1  MASSTSISRSQRPSTISPFRSRKSPALSPASRPNGRPTTPSSTASSRPPSKFSVSPVTTA 60

Query: 61 SCNPSPSTPPLDR 74
          SC PSPSTP LDR
Sbjct: 61 SCTPSPSTPALDR 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008466732.16.7e-2387.84PREDICTED: kinesin-related protein 4 isoform X1 [Cucumis melo] >KAA0055450.1 kin... [more]
XP_008447702.13.3e-2287.84PREDICTED: uncharacterized protein LOC103490113 [Cucumis melo][more]
KAA0061220.11.3e-2187.84kinesin-related protein 4 isoform X1 [Cucumis melo var. makuwa] >TYK06267.1 kine... [more]
XP_011657430.16.9e-2082.19kinesin-like protein KIN-7C, mitochondrial isoform X1 [Cucumis sativus] >KGN4771... [more]
XP_023549534.17.7e-1980.82kinesin-like protein KIN-7C, mitochondrial [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UJS83.2e-2387.84Kinesin-related protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3CS433.2e-2387.84kinesin-related protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504074 PE=... [more]
A0A1S3BI121.6e-2287.84uncharacterized protein LOC103490113 OS=Cucumis melo OX=3656 GN=LOC103490113 PE=... [more]
A0A5D3C3806.1e-2287.84Kinesin-related protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A0A0KIV73.4e-2082.19Kinesin motor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G3829... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029976.1MELO3C029976.1mRNA