MELO3C029891 (gene) Melon (DHL92) v4

Overview
NameMELO3C029891
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionL10-interacting MYB domain-containing protein-like
Locationchr12: 19765326 .. 19765835 (-)
RNA-Seq ExpressionMELO3C029891
SyntenyMELO3C029891
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTCCCCTCATCAAATCCATTTCTATGAAGTTCTCCGTCGTCAAACATGTTTTTTTTCTCCTTATTTCGTTCTCTGTTCTTCCTCAATCCATCTTCATGCAAATTGATTTTTCGTTGCGTTTCACGGATTGGGGAGGATTTTGTGTAGCCGAATCTCTATTTACATCTCTCTCATCCGTCTTTCTCACTCTCGAAAGGCTGTGTCGTATTTGTTGAAGTCGACCCTTCCACGACGTTGGCTCCAAACACGAAAACCTATTGGAATATGTATGGTTTTGCCTCCAAACATTTTTTGTTGAAGGCGATCCTAAAATAAAATCCTTGTCACTCGAGGTTCCATTGTTGCGGCTGGGTGTTTTGCTTGCCATTTCGTCATTCCAGATCTGATAAGAGAGAAACTTTCACTGTTGTCTGCCAATGGTTGTCGATCGAGCTTGGTAGGGAGGTACTGGACTCTTTTGAATCCAATTTTTTAGCTGATGATAAGTTTAACAATTTATACAAACTGA

mRNA sequence

TGTTCCCCTCATCAAATCCATTTCTATGAAGTTCTTTGTCACTCGAGGTTCCATTGTTGCGGCTGGGTGTTTTGCTTGCCATTTCGTCATTCCAGATCTGATAAGAGAGAAACTTTCACTGTTGTCTGCCAATGGTTGTCGATCGAGCTTGGTAGGGAGGTACTGGACTCTTTTGAATCCAATTTTTTAGCTGATGATAAGTTTAACAATTTATACAAACTGA

Coding sequence (CDS)

ATGAAGTTCTTTGTCACTCGAGGTTCCATTGTTGCGGCTGGGTGTTTTGCTTGCCATTTCGTCATTCCAGATCTGATAAGAGAGAAACTTTCACTGTTGTCTGCCAATGGTTGTCGATCGAGCTTGGTAGGGAGGTACTGGACTCTTTTGAATCCAATTTTTTAG

Protein sequence

MKFFVTRGSIVAAGCFACHFVIPDLIREKLSLLSANGCRSSLVGRYWTLLNPIF
Homology
[Close]
BLAST of MELO3C029891 vs. NCBI nr
Match: KAA0066136.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 3.0e-09
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 9  SIVAAGCFACHFVIPDLIREKLSLLSANGCRSSLVGRYWT 49
          SIVAAGCFACHF+IPDLIR+KLS LSANGCR SL+G +++
Sbjct: 18 SIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIGSFFS 57

[Close]
BLAST of MELO3C029891 vs. NCBI nr
Match: TYK15181.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 9  SIVAAGCFACHFVIPDLIREKLSLLSANGCRSSLVG 45
          SIVAAGCFACHF+IPDLIR+KLS LSANGCR SL+G
Sbjct: 18 SIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG 53

[Close]
BLAST of MELO3C029891 vs. ExPASy TrEMBL
Match: A0A5A7VIF4 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G001370 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 9  SIVAAGCFACHFVIPDLIREKLSLLSANGCRSSLVGRYWT 49
          SIVAAGCFACHF+IPDLIR+KLS LSANGCR SL+G +++
Sbjct: 18 SIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIGSFFS 57

[Close]
BLAST of MELO3C029891 vs. ExPASy TrEMBL
Match: A0A5D3CTK5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00500 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.5e-09
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 9  SIVAAGCFACHFVIPDLIREKLSLLSANGCRSSLVG 45
          SIVAAGCFACHF+IPDLIR+KLS LSANGCR SL+G
Sbjct: 18 SIVAAGCFACHFIIPDLIRQKLSPLSANGCRWSLIG 53

The following BLAST results are available for this feature:
BLAST of MELO3C029891 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C029891 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0066136.13.0e-0977.50L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa][more]
TYK15181.11.1e-0886.11L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C029891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VIF41.4e-0977.50L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... [more]
A0A5D3CTK55.5e-0986.11L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... [more]
BLAST of MELO3C029891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029891.1MELO3C029891.1mRNA