MELO3C029869.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C029869.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrotransposon protein
Location	chr03: 2347358 .. 2349583 (+)
RNA-Seq Expression	MELO3C029869.jh1
Synteny	MELO3C029869.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCAATGTTCCTCCATATGGTTGCGCACGACGTGAAAAACCGTGTCATTCAATGGGAGTTCATGCGGTCGGGTGAGACAATTTCCCGTCATTTTAACATGGTCTTGTTGATTGTTATTCGGCTTCATGACGAACTTTTGAAAAAACCACAACCAGTAAATAACGATTGCACGGATCAAAGATGGAGGTGGTTTGAGGTGCTTATTTCTCTTCAACTACGTACTTCAAACCCAACAATGTTATATCTTCCCAATAATCTTTAGTTATGCGTTGCAGAATTGCCTAGGTGCATTAGATGGAACATACATAAAAGTCAACATTCCAGCAAGTGACCACAAATGTACTTGGCGTGTATGAAACGAAAGGAGATTTTGTTTACGTACTTGCCGATTGGGAAGGATCAGCTGCGGACTCACGCATCCTCCGTGATGCCATTTCAAGACCTAATGGCCTGAAGGTGCCCAAGGGTAATATCCTACGACATTGTACATATGACTGCAATTTTAGAATTAACAACTGCGACATTTTAATCATGCAATGTGATCACAGGGTATTACTACCTAGTTGATGTAGGGTACCCAAATGCCGATGGTTTTCTAGCACCGTACAGAGGCCAATGCTACCATTTGCAGGAATGGCGTGGCGCTGAAAATGCACCTTCACCGTCGAAAGAGTTCTTCAATATGAAGCATTCATCTGCTCGTAATATAATCGAACGAGCATTCAGTGTCTTGAAGGGTCGATGGGCGATATTGCGGGGAAAGCATACTACCCTTTAGAAGTCCAATGTCGCACAATACTCGCATGTTGTCTTCTCCACAACCTTATCAATAGAGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACCCACGCGACTACTGCCACCGATGACATTCATTACATAGAGATGTCCAATGAGTGGACTCAATGGAGGGACGACCTTGGAGAAGAAATGTTTACTGATTGGGAGTTGCGTAACCAGTAGAAAAATTAAATATTCGTACATTTTCATACTTAAGTAGTCATTGCACTGGGTCTTATTTTATCATAGTTTTTGGAATATGATTATTTTGAATGTATTGGTTACGCAAGTAAATTAATGGCAAACTATTTTTCAGTAGGCGTTAACTGTACTATGAAACTAATTGTATGTATGTTATCTAATCATAGGGAAATTAATGAAACTAACATGTTTGCGTTTGACTTCTAGCATGACAAGTTCATTAAGACTACCTAAACACAGTTGGACTAAAGAGGAAGAGGCAGGCCTAGTCGAGTGCCTCGTAGAGTTAGTCAATGCTGGTGGGTGGAGGTTCGACAACGGGACCTTTCGTCCCGGGTACTTAAATCAGTTGGAGAGAATGATGACCTTTAAGATCCTCGATTGTAATATCCATGCTTCACCGAACGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCAGAGATGCGTGGCCCAACGTGCAGTGGTTTTGGATGGAATGATGAACAGAAATGCATCGTCGCAGAGAAAGAAGTCTTCAACGATTGGATCAAGGTGCGTTACTAGTCATTTGAACAATTACTGTACTATATTTCAATAAATGGACTAATAATTTATTATTGCACTTATATAGAGTCATCCGACGGCGAAGGGCCCCCTTAATAAGTCATTTCCCCACTATGATGAATTATTGTACGTGTTTGGCAAATATCGTGCAACGGGAGGCCGACGAAGAGTTTTGCGGACGTTGGGTCAAACGATCCTGCTGGGTATGACGCATTTCTCGCTGACGCTGCGCCAGATATGGACTTCCCGCCAATGTACAATCAGGGTTTGAACATGTCGTCTGATGATTTGATGGGAACAAGAACTGCTTGGGTCCGTGAACATAGGAATGTTTCAAGCGGGTCTAAGCGAAAACGTGCAGGACATTCCGCAGATAGTGGGGACATAATTCGCACTCTGATTGAGTACGAAAATGAACAACTGAACCACATTGCTGAATGGCCTGCCCTACAACGTCAAGACGCAAGCGAAACACGTCAAGAGGTTGTCCGCCAGTTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGACGTTCCCAACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCAATGA

mRNA sequence

ATGGTAGCAATGTTCCTCCATATGGTTGCGCACGACGTGAAAAACCGTGTCATTCAATGGGAGTTCATGCGGTCGGGGAAATTAATGAAACTAACATGTTTGCGTTTGACTTCTAGCATGACAAGTTCATTAAGACTACCTAAACACAGTTGGACTAAAGAGGAAGAGGCAGGCCTAGTCGAGTGCCTCGTAGAGTTAGTCAATGCTGGTGGGTGGAGGTTCGACAACGGGACCTTTCGTCCCGGGTACTTAAATCAGTTGGAGAGAATGATGACCTTTAAGATCCTCGATTGTAATATCCATGCTTCACCGAACGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCAGAGATGCGTGGCCCAACGTGCAGTGGTTTTGGATGGAATGATGAACAGAAATGCATCGTCGCAGAGAAAGAAGTCTTCAACGATTGGATCAAGAGTCATCCGACGGCGAAGGGCCCCCTTAATAAGTCATTTCCCCACTATGATGAATTATTGTACGTGTTTGGCAAATATCGTGCAACGGGAGGCCGACGAAGAGTTTTGCGGACGTTGGGTCAAACGATCCTGCTGGGTATGACGCATTTCTCGCTGACGCTGCGCCAGATATGGACTTCCCGCCAATGTACAATCAGGGTTTGAACATGTCGTCTGATGATTTGATGGGAACAAGAACTGCTTGGGTCCGTGAACATAGGAATGTTTCAAGCGGGTCTAAGCGAAAACGTGCAGGACATTCCGCAGATAGTGGGGACATAATTCGCACTCTGATTGAGTACGAAAATGAACAACTGAACCACATTGCTGAATGGCCTGCCCTACAACGTCAAGACGCAAGCGAAACACGTCAAGAGGTTGTCCGCCAGTTGGAGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGACGTTCCCAACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCAATGA

Coding sequence (CDS)

ATGGTAGCAATGTTCCTCCATATGGTTGCGCACGACGTGAAAAACCGTGTCATTCAATGGGAGTTCATGCGGTCGGGGAAATTAATGAAACTAACATGTTTGCGTTTGACTTCTAGCATGACAAGTTCATTAAGACTACCTAAACACAGTTGGACTAAAGAGGAAGAGGCAGGCCTAGTCGAGTGCCTCGTAGAGTTAGTCAATGCTGGTGGGTGGAGGTTCGACAACGGGACCTTTCGTCCCGGGTACTTAAATCAGTTGGAGAGAATGATGACCTTTAAGATCCTCGATTGTAATATCCATGCTTCACCGAACGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCAGAGATGCGTGGCCCAACGTGCAGTGGTTTTGGATGGAATGATGAACAGAAATGCATCGTCGCAGAGAAAGAAGTCTTCAACGATTGGATCAAGAGTCATCCGACGGCGAAGGGCCCCCTTAATAAGTCATTTCCCCACTATGATGAATTATTGTACGTGTTTGGCAAATATCGTGCAACGGGAGGCCGACGAAGAGTTTTGCGGACGTTGGGTCAAACGATCCTGCTGGGTATGACGCATTTCTCGCTGACGCTGCGCCAGATATGGACTTCCCGCCAATGTACAATCAGGGTTTGA

Protein sequence

MVAMFLHMVAHDVKNRVIQWEFMRSGKLMKLTCLRLTSSMTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCNIHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGPLNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHFSLTLRQIWTSRQCTIRV

Homology

[Close]

BLAST of MELO3C029869.jh1 vs. NCBI nr
Match: TYK18628.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 285 bits (730), Expect = 1.81e-93
Identity = 138/175 (78.86%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           M SS RLPKH+WTKEEEAGLVECL+ELVNAGGWR DN TFRPGYLNQL RMM FKI   N
Sbjct: 1   MASSSRLPKHNWTKEEEAGLVECLMELVNAGGWRSDNETFRPGYLNQLARMMAFKIPGSN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           +HAS  DSRIKL+KRMFHA+  MRGPTCSGFGWNDEQKCIVAEKEV ++W+KSH  AKG 
Sbjct: 61  VHASTIDSRIKLLKRMFHAIVGMRGPTCSGFGWNDEQKCIVAEKEVLDNWVKSHTAAKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHFSLTLRQIWTSRQC 214
           LNKSF HYDEL YVFGK RATGGR RVL+TLGQTILLG +H SLTLR+I TS  C
Sbjct: 121 LNKSFSHYDELSYVFGKDRATGGRPRVLQTLGQTILLGTSHLSLTLRRIRTSSLC 175

[Close]

BLAST of MELO3C029869.jh1 vs. NCBI nr
Match: TYK15304.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (684), Expect = 7.16e-87
Identity = 129/162 (79.63%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           MTSS RLPKHSWTKEEEAGLVECLVELVNA GWR DNGTF P YLNQL RMM FKI  CN
Sbjct: 1   MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           IHAS  DSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIV EKEVF+DW+KSHP AKG 
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHF 201
           LNKSFPHYDE LYVFGK RATGGR +    +G    +G   F
Sbjct: 121 LNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAF 162

[Close]

BLAST of MELO3C029869.jh1 vs. NCBI nr
Match: KAA0066570.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 264 bits (675), Expect = 1.66e-85
Identity = 128/162 (79.01%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           MTSS RLPKHSWTKEEEAGLVECLVELVNA GWR DNGTF P YLNQL RMM FKI  CN
Sbjct: 1   MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           IHAS  DSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIV  KEVF+DW+KSHP AKG 
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTVKEVFDDWVKSHPVAKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHF 201
           LNKSFPHYDE LYVFGK RATGGR +    +G     G   F
Sbjct: 121 LNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPAGYDAF 162

[Close]

BLAST of MELO3C029869.jh1 vs. NCBI nr
Match: KAA0047075.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (667), Expect = 3.20e-84
Identity = 125/163 (76.69%), Postives = 132/163 (80.98%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           M SS RLPKH+WTKEEEA LVECLVELVNAGGWR DNGTFRPGYLNQL RMM FKI  CN
Sbjct: 1   MASSSRLPKHTWTKEEEASLVECLVELVNAGGWRSDNGTFRPGYLNQLVRMMAFKIPGCN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           IHAS  DSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKE+F+DW+KSHP AKG 
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVVEKELFDDWVKSHPMAKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHFS 202
           LNKSF HYDEL YVFGK RATGGR      +G     G   F+
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFTDIGSNDPAGYDAFA 163

[Close]

BLAST of MELO3C029869.jh1 vs. NCBI nr
Match: TYK10662.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 260 bits (665), Expect = 4.50e-84
Identity = 128/163 (78.53%), Postives = 132/163 (80.98%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           MTSS RLPKH+WTKEEEAGLVECLVELVNAGGWR DNGTFRPGYLNQL RMM FKI  CN
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           IHAS  DSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIVAEKEVF+DW  SHPT KG 
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPTVKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHFS 202
           LNKSF HYDEL YVFGK RATGGR      +G     G    S
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGTARVS 161

[Close]

BLAST of MELO3C029869.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D513 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001660 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 8.76e-94
Identity = 138/175 (78.86%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           M SS RLPKH+WTKEEEAGLVECL+ELVNAGGWR DN TFRPGYLNQL RMM FKI   N
Sbjct: 1   MASSSRLPKHNWTKEEEAGLVECLMELVNAGGWRSDNETFRPGYLNQLARMMAFKIPGSN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           +HAS  DSRIKL+KRMFHA+  MRGPTCSGFGWNDEQKCIVAEKEV ++W+KSH  AKG 
Sbjct: 61  VHASTIDSRIKLLKRMFHAIVGMRGPTCSGFGWNDEQKCIVAEKEVLDNWVKSHTAAKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHFSLTLRQIWTSRQC 214
           LNKSF HYDEL YVFGK RATGGR RVL+TLGQTILLG +H SLTLR+I TS  C
Sbjct: 121 LNKSFSHYDELSYVFGKDRATGGRPRVLQTLGQTILLGTSHLSLTLRRIRTSSLC 175

[Close]

BLAST of MELO3C029869.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CWJ7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00110 PE=4 SV=1)

HSP 1 Score: 268 bits (684), Expect = 3.47e-87
Identity = 129/162 (79.63%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           MTSS RLPKHSWTKEEEAGLVECLVELVNA GWR DNGTF P YLNQL RMM FKI  CN
Sbjct: 1   MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           IHAS  DSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIV EKEVF+DW+KSHP AKG 
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHF 201
           LNKSFPHYDE LYVFGK RATGGR +    +G    +G   F
Sbjct: 121 LNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAF 162

[Close]

BLAST of MELO3C029869.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VHC6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G001420 PE=4 SV=1)

HSP 1 Score: 264 bits (675), Expect = 8.05e-86
Identity = 128/162 (79.01%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           MTSS RLPKHSWTKEEEAGLVECLVELVNA GWR DNGTF P YLNQL RMM FKI  CN
Sbjct: 1   MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           IHAS  DSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIV  KEVF+DW+KSHP AKG 
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTVKEVFDDWVKSHPVAKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHF 201
           LNKSFPHYDE LYVFGK RATGGR +    +G     G   F
Sbjct: 121 LNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPAGYDAF 162

[Close]

BLAST of MELO3C029869.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U098 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00330 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 1.55e-84
Identity = 125/163 (76.69%), Postives = 132/163 (80.98%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           M SS RLPKH+WTKEEEA LVECLVELVNAGGWR DNGTFRPGYLNQL RMM FKI  CN
Sbjct: 1   MASSSRLPKHTWTKEEEASLVECLVELVNAGGWRSDNGTFRPGYLNQLVRMMAFKIPGCN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           IHAS  DSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKE+F+DW+KSHP AKG 
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVVEKELFDDWVKSHPMAKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHFS 202
           LNKSF HYDEL YVFGK RATGGR      +G     G   F+
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFTDIGSNDPAGYDAFA 163

[Close]

BLAST of MELO3C029869.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CHB8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00240 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 2.18e-84
Identity = 128/163 (78.53%), Postives = 132/163 (80.98%), Query Frame = 0


Query: 40  MTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCN 99
           MTSS RLPKH+WTKEEEAGLVECLVELVNAGGWR DNGTFRPGYLNQL RMM FKI  CN
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCN 60

Query: 100 IHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGP 159
           IHAS  DSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIVAEKEVF+DW  SHPT KG 
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPTVKGL 120

Query: 160 LNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQTILLGMTHFS 202
           LNKSF HYDEL YVFGK RATGGR      +G     G    S
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPAGTARVS 161

[Close]

BLAST of MELO3C029869.jh1 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 47  PKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTF--KILDCNIHASP 106
           P + WT +E     + L+EL+    WR  +G    G L    +++    K L CN +   
Sbjct: 13  PYNQWTPDE----TDVLIELIRQ-NWRDSSGII--GKLTVESKLLPALNKRLGCNKNHKN 72

Query: 107 NDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGPLNKSF 166
             SR+K +K ++ +  +++    SGFGW+ E K   A  EV+ D++K+HP  K    +S 
Sbjct: 73  YMSRLKFLKNLYQSYLDLK-RFSSGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESI 132

Query: 167 PHYDELLYVFGKYRATG 182
            H+++L  +FG   ATG
Sbjct: 133 DHFEDLQIIFGDVVATG 141

[Close]

BLAST of MELO3C029869.jh1 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 34/136 (25.00%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 51  WTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKILDCNIHASPNDSRIK 110
           WT   +  L++ LVE VN G       TF     N++      K      +     +R K
Sbjct: 327 WTPPMDYHLIDLLVEQVNNG--NRVGQTFITSAWNEMVTAFNAK-FGSQHNKDVLKNRYK 386

Query: 111 LMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTAKGPLNKSFPHYDEL 170
            ++R+++ +  +     +GF W+  +  ++A+ +++N +I++HP A+    K+ P Y  L
Sbjct: 387 HLRRLYNDIKFLLEQ--NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSYPNL 446

Query: 171 LYVFGKYRATGGRRRV 187
            ++FGK  + G   R+
Sbjct: 447 CFIFGKETSDGRYTRL 457

[Close]

BLAST of MELO3C029869.jh1 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-08
Identity = 30/139 (21.58%), Postives = 66/139 (47.48%), Query Frame = 0


Query: 37  TSSMTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKIL 96
           ++S  SS+   + +W    +   ++ +++    G      G FR     ++  +   K  
Sbjct: 172 SNSKGSSVTRCRTTWHPPMDRYFIDLMLDQARRGNQ--IEGVFRKQAWTEMVNLFNAK-F 231

Query: 97  DCNIHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTA 156
           + N       +R K ++R F+A+  +      GF W++E++ + A+  V+ D+IK+H  A
Sbjct: 232 ESNFDVDVLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDA 291

Query: 157 KGPLNKSFPHYDELLYVFG 176
           +  + +  P+Y +L  + G
Sbjct: 292 RQFMTRPIPYYKDLCVLCG 305

[Close]

BLAST of MELO3C029869.jh1 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-08
Identity = 30/139 (21.58%), Postives = 66/139 (47.48%), Query Frame = 0


Query: 37  TSSMTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKIL 96
           ++S  SS+   + +W    +   ++ +++    G      G FR     ++  +   K  
Sbjct: 172 SNSKGSSVTRCRTTWHPPMDRYFIDLMLDQARRGNQ--IEGVFRKQAWTEMVNLFNAK-F 231

Query: 97  DCNIHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKSHPTA 156
           + N       +R K ++R F+A+  +      GF W++E++ + A+  V+ D+IK+H  A
Sbjct: 232 ESNFDVDVLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDA 291

Query: 157 KGPLNKSFPHYDELLYVFG 176
           +  + +  P+Y +L  + G
Sbjct: 292 RQFMTRPIPYYKDLCVLCG 305

[Close]

BLAST of MELO3C029869.jh1 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.9e-05
Identity = 39/161 (24.22%), Postives = 65/161 (40.37%), Query Frame = 0


Query: 38  SSMTSSLRLPKHSWTKEEEAGLVECLVELVNAGGWRFDNGTFRPGYLNQLERMMTFKI-- 97
           S + S     K  WT E +   VE +V+ +  G  +  N   +  +++ L   + F    
Sbjct: 159 SVVLSGKESSKTEWTLEMDQYFVEIMVDQIGRGN-KTGNAFSKQAWIDML---VLFNARF 218

Query: 98  ---LDCNIHASPNDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVAEKEVFNDWIKS 157
                  +     +  +K  K M   L E       GF W++ +  I A+  V++ +IK 
Sbjct: 219 SGQYGKRVLRHRYNKLLKYYKDMEAILKE------DGFSWDETRLMISADDAVWDSYIKD 278

Query: 158 HPTAKGPLNKSFPHYDELLYVFGKYRATGGRRRVLRTLGQT 194
           HP A+    KS P Y++L  +F      G   R   +  QT
Sbjct: 279 HPLARTYRMKSLPSYNDLDTIFACQAEQGTDHRDDGSAAQT 309

The following BLAST results are available for this feature:

BLAST of MELO3C029869.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK18628.1	1.81e-93	78.86	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK15304.1	7.16e-87	79.63	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0066570.1	1.66e-85	79.01	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0047075.1	3.20e-84	76.69	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK10662.1	4.50e-84	78.53	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C029869.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C029869.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D513	8.76e-94	78.86	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CWJ7	3.47e-87	79.63	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VHC6	8.05e-86	79.01	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U098	1.55e-84	76.69	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CHB8	2.18e-84	78.53	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C029869.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30140.1	2.1e-14	31.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	2.0e-09	25.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02210.1	2.9e-08	21.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	2.9e-08	21.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24960.1	3.9e-05	24.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 50..147 e-value: 2.0E-7 score: 31.9
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 45..181
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 45..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029869.jh1.t1	MELO3C029869.jh1.t1	mRNA