MELO3C029837 (gene) Melon (DHL92) v4

Overview
NameMELO3C029837
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr03: 1615315 .. 1615530 (+)
RNA-Seq ExpressionMELO3C029837
SyntenyMELO3C029837
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCGAGAATGAAAACAGCATAGAGGACGAAGAAGATGAGAGTGTGTATAGCAACAGCTTTTCCGTTGGTCTTCATGCTCCCGAACTCAAACTGACGATTATTCCCGGGAAACTGAAACAGAAGCCCGGGAGAAAGCAGTACGAAGAGTACAACTCCGATGACCACGGGTGCCCAATCCGACATAGTTTCACAGATATCGTAAAAGAGTAA

mRNA sequence

ATGGAGAGCGAGAATGAAAACAGCATAGAGGACGAAGAAGATGAGAGTGTGTATAGCAACAGCTTTTCCGTTGGTCTTCATGCTCCCGAACTCAAACTGACGATTATTCCCGGGAAACTGAAACAGAAGCCCGGGAGAAAGCAGTACGAAGAGTACAACTCCGATGACCACGGGTGCCCAATCCGACATAGTTTCACAGATATCGTAAAAGAGTAA

Coding sequence (CDS)

ATGGAGAGCGAGAATGAAAACAGCATAGAGGACGAAGAAGATGAGAGTGTGTATAGCAACAGCTTTTCCGTTGGTCTTCATGCTCCCGAACTCAAACTGACGATTATTCCCGGGAAACTGAAACAGAAGCCCGGGAGAAAGCAGTACGAAGAGTACAACTCCGATGACCACGGGTGCCCAATCCGACATAGTTTCACAGATATCGTAAAAGAGTAA

Protein sequence

MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCPIRHSFTDIVKE
Homology
BLAST of MELO3C029837 vs. NCBI nr
Match: KAA0056546.1 (hypothetical protein E6C27_scaffold288G00480 [Cucumis melo var. makuwa] >TYK02716.1 hypothetical protein E5676_scaffold1154G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1   MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 60
           MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP
Sbjct: 66  MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 125

Query: 61  IRHSFTDIVKE 72
           IRHSFTDIVKE
Sbjct: 126 IRHSFTDIVKE 136

BLAST of MELO3C029837 vs. NCBI nr
Match: KAE8652261.1 (hypothetical protein Csa_022581 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 4.8e-23
Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 1   MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 60
           MESENE+SIEDEEDESVYSNSFS+GLHAP+LKL II  KLKQK  RKQYEEYNSDDH CP
Sbjct: 70  MESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCP 129

Query: 61  IRHSFTDIVKE 72
           IRHSF D V +
Sbjct: 130 IRHSFRDTVNQ 140

BLAST of MELO3C029837 vs. NCBI nr
Match: KAG6578364.1 (hypothetical protein SDJN03_22812, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-14
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0

Query: 2   ESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCPI 61
           ESENE+ ++D+E+E V  +  SVGLH P+LKL+IIP KL+QKP R+QYE+YNSD + CPI
Sbjct: 71  ESENEDGVKDKENERVNGDGLSVGLHTPKLKLSIIPRKLEQKPWREQYEQYNSDHYRCPI 130

Query: 62  RHSFTDIV 70
           RH F D V
Sbjct: 131 RHPFPDFV 138

BLAST of MELO3C029837 vs. NCBI nr
Match: KAG6602686.1 (Actin-related protein 2/3 complex subunit 2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.5 bits (210), Expect = 2.0e-13
Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 0

Query: 1   MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 60
           M+SENE+ IEDEEDES+   SF+V LH PELKL IIP +L+QKP RKQ+E+ NSD H  P
Sbjct: 122 MKSENEDGIEDEEDESMNDYSFTVSLHTPELKLPIIPRELEQKPWRKQHEQNNSDHHWRP 181

Query: 61  IRHSFTDI 69
           IRH   DI
Sbjct: 182 IRHRVRDI 189

BLAST of MELO3C029837 vs. NCBI nr
Match: GER47504.1 (hypothetical protein STAS_24622 [Striga asiatica])

HSP 1 Score: 77.4 bits (189), Expect = 5.5e-11
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 0

Query: 1   MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 60
           ++ E+ENS+E EEDE V  NS +VGLHA EL+L ++P  LKQ+P  +QYEEYNSD+H  P
Sbjct: 84  VDGEDENSVEGEEDERVDGNSLAVGLHASELQLAVVPRYLKQQPRLQQYEEYNSDEHRAP 143

Query: 61  IRH 64
           + H
Sbjct: 144 VSH 146

BLAST of MELO3C029837 vs. ExPASy TrEMBL
Match: A0A5D3BWV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00140 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.1e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1   MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 60
           MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP
Sbjct: 66  MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 125

Query: 61  IRHSFTDIVKE 72
           IRHSFTDIVKE
Sbjct: 126 IRHSFTDIVKE 136

BLAST of MELO3C029837 vs. ExPASy TrEMBL
Match: A0A0A0LT04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406100 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-23
Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 1  MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 60
          MESENE+SIEDEEDESVYSNSFS+GLHAP+LKL II  KLKQK  RKQYEEYNSDDH CP
Sbjct: 1  MESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCP 60

Query: 61 IRHSFTDIVKE 72
          IRHSF D V +
Sbjct: 61 IRHSFRDTVNQ 71

BLAST of MELO3C029837 vs. ExPASy TrEMBL
Match: A0A5A7QQI9 (Uncharacterized protein OS=Striga asiatica OX=4170 GN=STAS_24622 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.7e-11
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 0

Query: 1   MESENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCP 60
           ++ E+ENS+E EEDE V  NS +VGLHA EL+L ++P  LKQ+P  +QYEEYNSD+H  P
Sbjct: 84  VDGEDENSVEGEEDERVDGNSLAVGLHASELQLAVVPRYLKQQPRLQQYEEYNSDEHRAP 143

Query: 61  IRH 64
           + H
Sbjct: 144 VSH 146

BLAST of MELO3C029837 vs. ExPASy TrEMBL
Match: A0A445GEX9 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_042794 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-06
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 4   ENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCPIRH 63
           E+E+ +E EEDE V  N F+VGLHA ELKL  +P K +++P  +Q+E+   D + CPI H
Sbjct: 75  EDEDGVEREEDERVDENGFAVGLHATELKLLPVPRKGEKQPRLEQHEQNYPDQNRCPISH 134

Query: 64  SFTD 68
             TD
Sbjct: 135 FLTD 138

BLAST of MELO3C029837 vs. ExPASy TrEMBL
Match: A0A0B2R840 (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040169 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-06
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 4  ENENSIEDEEDESVYSNSFSVGLHAPELKLTIIPGKLKQKPGRKQYEEYNSDDHGCPIRH 63
          E+E+ +E EEDE V  N F+VGLHA ELKL  +P K +++P  +Q+E+   D + CPI H
Sbjct: 20 EDEDGVEREEDERVDENGFAVGLHATELKLLPVPRKGEKQPRLEQHEQNYPDQNRCPISH 79

Query: 64 SFTD 68
            TD
Sbjct: 80 FLTD 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056546.11.3e-31100.00hypothetical protein E6C27_scaffold288G00480 [Cucumis melo var. makuwa] >TYK0271... [more]
KAE8652261.14.8e-2381.69hypothetical protein Csa_022581 [Cucumis sativus][more]
KAG6578364.11.4e-1461.76hypothetical protein SDJN03_22812, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6602686.12.0e-1364.71Actin-related protein 2/3 complex subunit 2A, partial [Cucurbita argyrosperma su... [more]
GER47504.15.5e-1157.14hypothetical protein STAS_24622 [Striga asiatica][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BWV46.1e-32100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LT042.3e-2381.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406100 PE=4 SV=1[more]
A0A5A7QQI92.7e-1157.14Uncharacterized protein OS=Striga asiatica OX=4170 GN=STAS_24622 PE=4 SV=1[more]
A0A445GEX91.5e-0648.44Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_042794 PE=4 SV=1[more]
A0A0B2R8401.5e-0648.44Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040169 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029837.1MELO3C029837.1mRNA