MELO3C029821 (gene) Melon (DHL92) v4

Overview
NameMELO3C029821
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Locationchr11: 13134974 .. 13135360 (+)
RNA-Seq ExpressionMELO3C029821
SyntenyMELO3C029821
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTCCATTCTAAAAATGATCGTGCATAAGGCTCATATAAATCTTGGAGTTAATATAAGTTATCAAAAAGCTTGGAGGGCAAAAGAGCACATAGTAAAGATATTAAAAGGTGATGCAGTTGAATCGTATACGTTGATTCCAAACTTCTTTGATGAATTGGTTGAATCTAACCCATGTATGATTAGTTTCCTATACCAAATTTACATTCATCTGCAGATAGATGGGATAGACAAATATCGCAGTCTATCTAGATAGACACGTATTAGCATCTATGACAGTATATATGTTCTCTTTTGTTGGTGTTAATAGAAATGTTTTATAATTTTTATAGGTACATGCACTAATTTAGAGATAGATGATAGTGATCATTTCAAGTTTTGCTTTAT

mRNA sequence

TCATTCCATTCTAAAAATGATCGTGCATAAGGCTCATATAAATCTTGGAGTTAATATAAGTTATCAAAAAGCTTGGAGGGCAAAAGAGCACATAGTAAAGATATTAAAAGGTGATGCAGTTGAATCGTATACGTTGATTCCAAACTTCTTTGATGAATTGGTTGAATCTAACCCATGTACATGCACTAATTTAGAGATAGATGATAGTGATCATTTCAAGTTTTGCTTTAT

Coding sequence (CDS)

ATGATCGTGCATAAGGCTCATATAAATCTTGGAGTTAATATAAGTTATCAAAAAGCTTGGAGGGCAAAAGAGCACATAGTAAAGATATTAAAAGGTGATGCAGTTGAATCGTATACGTTGATTCCAAACTTCTTTGATGAATTGGTTGAATCTAACCCATGTACATGCACTAATTTAGAGATAGATGATAGTGATCATTTCAAGTTTTGCTTT

Protein sequence

MIVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEIDDSDHFKFCF
Homology
BLAST of MELO3C029821 vs. NCBI nr
Match: KAA0033561.1 (uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 2   IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
           IVHKA  NLGVNISY+KAWRAKEH+VKIL GD VESY LIP FFD+LV+SNPCTCT LE+
Sbjct: 49  IVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEM 108

Query: 62  DDSDHFKFCF 72
           DDS HFKFCF
Sbjct: 109 DDSGHFKFCF 118

BLAST of MELO3C029821 vs. NCBI nr
Match: TYJ95626.1 (uncharacterized protein E5676_scaffold104G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 2   IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
           IVHKA  NLGVNISY+KAWRAKEH+VKIL GD VESY LIP FFD+LV+SNPCTCT LE+
Sbjct: 49  IVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEM 108

Query: 62  DDSDHFKFCF 72
           DDS HFKFCF
Sbjct: 109 DDSGHFKFCF 118

BLAST of MELO3C029821 vs. NCBI nr
Match: TYK02872.1 (protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 6.7e-25
Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 2  IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
          IVHKA  NLG+NISYQKAWRAKEH+VKIL GD VESY LIP FFD+LVESNP TCT LE+
Sbjct: 29 IVHKARTNLGINISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPGTCTALEM 88

Query: 62 DDSDHFKFCF 72
          DDS HFKFCF
Sbjct: 89 DDSGHFKFCF 98

BLAST of MELO3C029821 vs. NCBI nr
Match: KAA0037812.1 (protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 6.7e-25
Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 2  IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
          IVHKA  NLG+NISYQKAWRAKEH+VKIL GD VESY LIP FFD+LVESNP TCT LE+
Sbjct: 29 IVHKARTNLGINISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPGTCTALEM 88

Query: 62 DDSDHFKFCF 72
          DDS HFKFCF
Sbjct: 89 DDSGHFKFCF 98

BLAST of MELO3C029821 vs. NCBI nr
Match: KAA0035384.1 (protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa] >TYK03496.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 8.7e-25
Identity = 57/70 (81.43%), Postives = 60/70 (85.71%), Query Frame = 0

Query: 2  IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
          IVHKAH NLGVNISYQKAWR KEH+VKIL  D VESY LIP FFD+LVESNP TCT LE+
Sbjct: 29 IVHKAHTNLGVNISYQKAWRVKEHMVKILHDDKVESYALIPRFFDKLVESNPSTCTALEM 88

Query: 62 DDSDHFKFCF 72
          DDS HFKFCF
Sbjct: 89 DDSGHFKFCF 98

BLAST of MELO3C029821 vs. ExPASy TrEMBL
Match: A0A5A7SVW4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G001160 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.5e-26
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 2   IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
           IVHKA  NLGVNISY+KAWRAKEH+VKIL GD VESY LIP FFD+LV+SNPCTCT LE+
Sbjct: 49  IVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEM 108

Query: 62  DDSDHFKFCF 72
           DDS HFKFCF
Sbjct: 109 DDSGHFKFCF 118

BLAST of MELO3C029821 vs. ExPASy TrEMBL
Match: A0A5D3B9S0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00450 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.5e-26
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 2   IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
           IVHKA  NLGVNISY+KAWRAKEH+VKIL GD VESY LIP FFD+LV+SNPCTCT LE+
Sbjct: 49  IVHKARTNLGVNISYEKAWRAKEHMVKILHGDTVESYALIPRFFDKLVKSNPCTCTALEM 108

Query: 62  DDSDHFKFCF 72
           DDS HFKFCF
Sbjct: 109 DDSGHFKFCF 118

BLAST of MELO3C029821 vs. ExPASy TrEMBL
Match: A0A5A7T2W2 (Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold918G00260 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.2e-25
Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 2  IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
          IVHKA  NLG+NISYQKAWRAKEH+VKIL GD VESY LIP FFD+LVESNP TCT LE+
Sbjct: 29 IVHKARTNLGINISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPGTCTALEM 88

Query: 62 DDSDHFKFCF 72
          DDS HFKFCF
Sbjct: 89 DDSGHFKFCF 98

BLAST of MELO3C029821 vs. ExPASy TrEMBL
Match: A0A5D3BVN2 (Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00010 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.2e-25
Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 2  IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
          IVHKA  NLG+NISYQKAWRAKEH+VKIL GD VESY LIP FFD+LVESNP TCT LE+
Sbjct: 29 IVHKARTNLGINISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPGTCTALEM 88

Query: 62 DDSDHFKFCF 72
          DDS HFKFCF
Sbjct: 89 DDSGHFKFCF 98

BLAST of MELO3C029821 vs. ExPASy TrEMBL
Match: A0A5D3BZ76 (Protein FAR-RED IMPAIRED RESPONSE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001160 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-25
Identity = 57/70 (81.43%), Postives = 60/70 (85.71%), Query Frame = 0

Query: 2  IVHKAHINLGVNISYQKAWRAKEHIVKILKGDAVESYTLIPNFFDELVESNPCTCTNLEI 61
          IVHKAH NLGVNISYQKAWR KEH+VKIL  D VESY LIP FFD+LVESNP TCT LE+
Sbjct: 29 IVHKAHTNLGVNISYQKAWRVKEHMVKILHDDKVESYALIPRFFDKLVESNPSTCTALEM 88

Query: 62 DDSDHFKFCF 72
          DDS HFKFCF
Sbjct: 89 DDSGHFKFCF 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033561.11.3e-2581.43uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa][more]
TYJ95626.11.3e-2581.43uncharacterized protein E5676_scaffold104G00450 [Cucumis melo var. makuwa][more]
TYK02872.16.7e-2581.43protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa][more]
KAA0037812.16.7e-2581.43protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa][more]
KAA0035384.18.7e-2581.43protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa] >TYK03496.1 ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SVW46.5e-2681.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3B9S06.5e-2681.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T2W23.2e-2581.43Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BVN23.2e-2581.43Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3BZ764.2e-2581.43Protein FAR-RED IMPAIRED RESPONSE 1-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029821.1MELO3C029821.1mRNA