MELO3C029787.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C029787.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionAcetyl-CoA carboxylase 1-like
Locationchr03: 1248513 .. 1248683 (+)
RNA-Seq ExpressionMELO3C029787.jh1
SyntenyMELO3C029787.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGAAAGGGGAAGGTCTTTAATAACACTAGAGTGAAGCATAGAGTGAAACGGTCGATTAAGGTGTCCACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAGGAAATATGGTCAAAAGCCAATCAAGGGTTCTCCACACCCAAGGTATACAAATATGA

mRNA sequence

ATGGTAGGAAAGGGGAAGGTCTTTAATAACACTAGAGTGAAGCATAGAGTGAAACGGTCGATTAAGGTGTCCACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAGGAAATATGGTCAAAAGCCAATCAAGGGTTCTCCACACCCAAGGTATACAAATATGA

Coding sequence (CDS)

ATGGTAGGAAAGGGGAAGGTCTTTAATAACACTAGAGTGAAGCATAGAGTGAAACGGTCGATTAAGGTGTCCACGATTAGTAACAAGCTAGCAGATATGATGATTATTCATGGAGGAAATATGGTCAAAAGCCAATCAAGGGTTCTCCACACCCAAGGTATACAAATATGA

Protein sequence

MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRVLHTQGIQI
Homology
BLAST of MELO3C029787.jh1 vs. NCBI nr
Match: KAA0042275.1 (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 7.69e-20
Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRVLHTQ 52
           ++ K K FNNTRVKHRVKRSIKV TISN+LADMMIIHGGNM KSQSRVLHTQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

BLAST of MELO3C029787.jh1 vs. NCBI nr
Match: KAA0042207.1 (triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 6.68e-19
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRVLHTQ 52
           + GKGK FNNTRVKHRVK SIKV TISNKLADMMIIHGGNM KSQS+VL TQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

BLAST of MELO3C029787.jh1 vs. NCBI nr
Match: KAA0051708.1 (acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 6.56e-18
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRV 48
           + GKGK FNNTRVKHRVK SIKV TISNKLADMMIIHGGNM KSQS++
Sbjct: 118 VTGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKI 165

BLAST of MELO3C029787.jh1 vs. NCBI nr
Match: TYK26778.1 (heat stress transcription factor A-2d-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 7.05e-18
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRV 48
           + GKGK FNNTRVKHRVKRSIKV TISNKLADMMIIHGGNM KSQS++
Sbjct: 302 ITGKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 349

BLAST of MELO3C029787.jh1 vs. NCBI nr
Match: KAA0054890.1 (triacylglycerol lipase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 3.26e-16
Identity = 38/48 (79.17%), Postives = 42/48 (87.50%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRV 48
           + GKGK FNNTRVKHRVKR IKV TISNKL D+MIIHGGNM KSQS++
Sbjct: 224 ITGKGKAFNNTRVKHRVKRYIKVPTISNKLVDVMIIHGGNMAKSQSKI 271

BLAST of MELO3C029787.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TLF6 (Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00590 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.72e-20
Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRVLHTQ 52
           ++ K K FNNTRVKHRVKRSIKV TISN+LADMMIIHGGNM KSQSRVLHTQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

BLAST of MELO3C029787.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TKJ7 (Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007180 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.23e-19
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRVLHTQ 52
           + GKGK FNNTRVKHRVK SIKV TISNKLADMMIIHGGNM KSQS+VL TQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

BLAST of MELO3C029787.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U8V0 (Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00940 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.18e-18
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRV 48
           + GKGK FNNTRVKHRVK SIKV TISNKLADMMIIHGGNM KSQS++
Sbjct: 118 VTGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKI 165

BLAST of MELO3C029787.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DTC4 (Heat stress transcription factor A-2d-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00780 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.41e-18
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRV 48
           + GKGK FNNTRVKHRVKRSIKV TISNKLADMMIIHGGNM KSQS++
Sbjct: 302 ITGKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 349

BLAST of MELO3C029787.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UHW8 (Triacylglycerol lipase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G00080 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.58e-16
Identity = 38/48 (79.17%), Postives = 42/48 (87.50%), Query Frame = 0

Query: 1   MVGKGKVFNNTRVKHRVKRSIKVSTISNKLADMMIIHGGNMVKSQSRV 48
           + GKGK FNNTRVKHRVKR IKV TISNKL D+MIIHGGNM KSQS++
Sbjct: 224 ITGKGKAFNNTRVKHRVKRYIKVPTISNKLVDVMIIHGGNMAKSQSKI 271

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0042275.17.69e-2084.62transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. ma... [more]
KAA0042207.16.68e-1984.62triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa][more]
KAA0051708.16.56e-1883.33acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa][more]
TYK26778.17.05e-1885.42heat stress transcription factor A-2d-like [Cucumis melo var. makuwa][more]
KAA0054890.13.26e-1679.17triacylglycerol lipase 1-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TLF63.72e-2084.62Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. ... [more]
A0A5A7TKJ73.23e-1984.62Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7U8V03.18e-1883.33Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5D3DTC43.41e-1885.42Heat stress transcription factor A-2d-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7UHW81.58e-1679.17Triacylglycerol lipase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018872Zn-cluster domainPFAMPF10533Plant_zn_clustcoord: 12..32
e-value: 6.4E-6
score: 26.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029787.jh1.t1MELO3C029787.jh1.t1mRNA