MELO3C029759 (gene) Melon (DHL92) v4

Overview
NameMELO3C029759
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr02: 25674536 .. 25677640 (+)
RNA-Seq ExpressionMELO3C029759
SyntenyMELO3C029759
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACGACATGCAGCGTTGCTTACCACAGCCGATGCATTCCTCATCACCGTCATGAAGAATTCGGTAGCTACGTTTGCATTCATTGTTGACCCAAGTGATCTCGAGTTCAGGCAGTTGAGGATGGTTTGTAGTTGTGGTTGTAAGGATGGCAGAGGAGCAAGATGGATTCGTGGAACGATGTCGTATCTTGTGACGAAGTGCACAAAATTGGTGGACCATTTCTCCCTTTTGAGAGCATGGGAGAAAATGAAGTTACCAACAAGGGGAGATCCAAATGTGATACATGTAGGAGTGAAGTTGGTGTATGGGTTTGAGTCTGGGTTTCTTTGCTGTTCCAACAGCCAGATGGTTGCAAGAATGGCTATCGGACCTCCGGCTGAGTGGCCGGTAAACACCACAGACTTATTCACTCTTAGCACCTGAGAAACGAAATCCCTCGTTAGTTTAAGAGAAGTGATAGAGGGTTTTGTTGGAAGCCTGGATTTATTATAAGTGAATGACAATAATGAGAAATTGCACAAGGAAATAATGCAATTTCTAAATATGGAGTACGATACAGATACAGAATCATGTTTGGTAAAGTTATTTTGTCGAAATCATAGCATTGCAAGAATGTTGAAGCAAAATTTTATTCAATTTTTGTTTTCATACCTTCAAATATCTAATTTTAATCCTATATTTTTCAAGAAACTTATTTATTGTTGATTTTAAATAAAACTACTTGTTATTTATTCTTTGAACATTCTTTTTTCAAAGGAGATTTTCAAATGGAAAATATAGTAAAATTTTAGACTTTATCAATAATACTATTAGTATATCAATGTACATTGAAGAAAGTCTAAGTTTATTTTGTGTCTATATTTTGTAAATATTTATAAGTAGTTTTATTATTTATGATATTTTTTCTTTTTTTACTCTAGATTTTGAAAATATATTTATATGTTATGTTTTCTCACGAGATTATTAATCAACCTAGAAAAAAAAAACTCTTTTATTGCAATTTACAATACTCAGAATATTAATAACATGTACTCAACACCCCAAAACTTGACTATTTTTTTGTCCATATTATTTAAAATTTTGAACTCATAAACTTACCCCATCTAAATTTTAGTGAATCGATTATATTTTAGAAATAAAATGTCATAAAAAGAGGTTAAACAATTTAAAATATTATATCGGAGAAACTTCGATTTATCTTCTTAAAACTTTTAAAATTCTAAACTAACATTATGGACTGATTTGCCTTAGTGAATCAAATTAAGAGCATTTATTAAGTTTGCATTTAAAAATTACCATTACTCCAACTGAAATAAGAAAAAAAAAAGCTTTGGAAAATTATTAAATAAGAAAAATTGATATTGAAAATATATAATTAGATTGGCCAAAATTTCTTAAAGAAAGTAAACAAATAAAGAACTTAAGAAAAGAAACCAAATGTGAATAACTAAATCAGTAGACACATAAAAAGTACCAAATTAGGGCGAAATTAGGGCAAATAACAGTAATGATACCTCCTTAAGCTTCCCGAAAATTCCCTGGAATCGCCGAAGAAATGCGGAATTGACGACGGCATAATCATCGACGCCGATGCTCCTGACGGACGGAAACAGCTGAGTATCGATTTTGGTTTCTCCGAAAGACGAATCGGAAGCAGAGAACCAGGCTTCCGGTGACGAAGATCCGGCGAAGCTAATGATGGAGGAATCTCTAGTTTTATCAAGAAGAAATGGCTTCTCAGGATGCTTGTGAGCTTTAATGGCGGCAGACCAAGCGCTTGCGATGAGATCTTCCTTCAAATTAATGGCGCCTTCAAGCTTCAGGTGAGCCATTTTTCCTTAGCTCCGATTATGCTTTTCTGCTTTTGGCTCAGAGTCTTCGTCTTCGTCTTCGTCTTCTTAATTTATGATACGAAAAATAATATATTAAGGAATTGTTAATCATTGGCTGTCGTTTTTCCGCTTGGAAAAGTAGTTTTGGATTGGGCAGTGCTTTTCCAAGAAATTTAATACAAGTGGTCTGTCGAGGAATCAAAGTTTCAATATCTATGAACTTTCCAACTTTGTTTGTTTCTTTCACTTTCACATGTGAGAGTTTGGGAACTACTTTTCCTAAAATAATATTTCTTTTCTTATCCAATAAGTCTGTTTTCTTTTTTCTTTCGCAAATATTTATACTATTAAACTGTGAATATGAATTTTCGATCAATTCAAATAAACTTTTAACCTTTGTAAAACATAATAGAGGGTTTAAGTTTATGCACTTGTAAAAATATATAGTCTAAATTGACATAATTAATGATTTGAGGTTTGAATTGATACCACTTTCAAAGTTTAAAGTTTAGCTTAGGTAATAAATATTTCTCTTTTTCTTTACATCTCGGTTTACTTTTTATTTGGTCCATATTTTCCAAAATATTAAATATCTGTGTCTTTTATTTTGAATTTGTTTTTTAATTTAATCCTTAGACTTCATGACCGATGTTTTATTATGGTCTTTTTAAGTTTTAAATCTAATTTTTATTTAGTTTATAAGTTTCTGAATGTTTCCTTTGTTTTAGTTTGGTTAAAATTTAGTGCTTATGTTTTTAAAATATTATAATTTTATTAATAAAATTTGACTTAATAAAATTGTATCATTAATTAATGACTAGAGATGTAATTTTTTGAAATTTATAAATCAAATGTAATGTGGACTTAAAACTTACGATAAGTGTAATTTTGTATTCTACCCTTTTCCAATACACTCATATAATATAGTGCTAAAATGAGCTTAATTAAGATGTTAATTTGAGGGTCTTATTAAAATTGTGGTATACAAAAAGTGTGGTGAATGAGATAACAACGTAGACCAAATCATTCCATTAAACATTTCTAAAAACTAACCTACAATTGAAATCGAAAATTTCATATTCATCATCTCTATAAGTTTTCTCATACGGCAAGATTTCTCGCCAGAATCCCTTCAAATGAAATCCCAGGTCCAAACGCCAGAATCAATCCCCATTCCTCAGTCTTCCTACCATCCATCTTCATTTTCAAGCTTTCTTCCATCATGTATTCCAATACGTACACGATCGTGTTGCTACTCGCATTTCCATAG

mRNA sequence

ATGAGACGACATGCAGCGTTGCTTACCACAGCCGATGCATTCCTCATCACCGTCATGAAGAATTCGGTAGCTACGTTTGCATTCATTGTTGACCCAAGTGATCTCGAGTTCAGGCAGTTGAGGATGGTTTGTAGTTGTGGTTGTAAGGATGGCAGAGGAGCAAGATGGATTCGTGGAACGATGTCGTATCTTGTGACGAAGTGCACAAAATTGGTGGACCATTTCTCCCTTTTGAGAGCATGGGAGAAAATGAAGTTACCAACAAGGGGAGATCCAAATGTGATACATGTAGGAGTGAAGTTGGTGTATGGGTTTGAGTCTGGGTTTCTTTGCTGTTCCAACAGCCAGATGGTTGCAAGAATGGCTATCGGACCTCCGGCTGAGTGGCCGCTTCCCGAAAATTCCCTGGAATCGCCGAAGAAATGCGGAATTGACGACGGCATAATCATCGACGCCGATGCTCCTGACGGACGGAAACAGCTGAGTATCGATTTTGGTTTCTCCGAAAGACGAATCGGAAGCAGAGAACCAGGCTTCCGGTGACGAAGATCCGGCGAAGCTAATGATGGAGGAATCTCTAGTTTTATCAAGAAGAAATGGCTTCTCAGGATGCTTGTGAGCTTTAATGGCGGCAGACCAAGCGCTTGCGATGAGATCTTCCTTCAAATTAATGGCGCCTTCAAGCTTCAGTTTTCTCATACGGCAAGATTTCTCGCCAGAATCCCTTCAAATGAAATCCCAGGTCCAAACGCCAGAATCAATCCCCATTCCTCAGTCTTCCTACCATCCATCTTCATTTTCAAGCTTTCTTCCATCATGTATTCCAATACGTACACGATCGTGTTGCTACTCGCATTTCCATAG

Coding sequence (CDS)

ATGAGACGACATGCAGCGTTGCTTACCACAGCCGATGCATTCCTCATCACCGTCATGAAGAATTCGGTAGCTACGTTTGCATTCATTGTTGACCCAAGTGATCTCGAGTTCAGGCAGTTGAGGATGGTTTGTAGTTGTGGTTGTAAGGATGGCAGAGGAGCAAGATGGATTCGTGGAACGATGTCGTATCTTGTGACGAAGTGCACAAAATTGGTGGACCATTTCTCCCTTTTGAGAGCATGGGAGAAAATGAAGTTACCAACAAGGGGAGATCCAAATGTGATACATGTAGGAGTGAAGTTGGTGTATGGGTTTGAGTCTGGGTTTCTTTGCTGTTCCAACAGCCAGATGGTTGCAAGAATGGCTATCGGACCTCCGGCTGAGTGGCCGCTTCCCGAAAATTCCCTGGAATCGCCGAAGAAATGCGGAATTGACGACGGCATAATCATCGACGCCGATGCTCCTGACGGACGGAAACAGCTGAGTATCGATTTTGGTTTCTCCGAAAGACGAATCGGAAGCAGAGAACCAGGCTTCCGGTGA

Protein sequence

MRRHAALLTTADAFLITVMKNSVATFAFIVDPSDLEFRQLRMVCSCGCKDGRGARWIRGTMSYLVTKCTKLVDHFSLLRAWEKMKLPTRGDPNVIHVGVKLVYGFESGFLCCSNSQMVARMAIGPPAEWPLPENSLESPKKCGIDDGIIIDADAPDGRKQLSIDFGFSERRIGSREPGFR
Homology
[Close]
BLAST of MELO3C029759 vs. NCBI nr
Match: ERM98960.1 (hypothetical protein AMTR_s00226p00007010 [Amborella trichopoda])

HSP 1 Score: 75.5 bits (184), Expect = 5.3e-10
Identity = 41/82 (50.00%), Postives = 48/82 (58.54%), Query Frame = 0 

Query: 50  DGRGARWIRGTMSYLVTKCTKLVDHFSLLRAWEKMKLPTRGDPNVIHVG-VKLVYGFESG 109
           D +G + IRGT SYL TK  K  D FSL  AW +   PT GDP V+H G V+LV GF+  
Sbjct: 2   DEKGEKRIRGTTSYLDTKLMKCEDQFSLQIAWTRRWSPTNGDPKVMHRGVVRLVPGFQDW 61

Query: 110 FLCCSNSQMVARMAIGPPAEWP 131
                 S  VA +AI PP EWP
Sbjct: 62  L----RSHRVAMIAIDPPIEWP 79

[Close]
BLAST of MELO3C029759 vs. ExPASy TrEMBL
Match: W1NUL5 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00226p00007010 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.6e-10
Identity = 41/82 (50.00%), Postives = 48/82 (58.54%), Query Frame = 0 

Query: 50  DGRGARWIRGTMSYLVTKCTKLVDHFSLLRAWEKMKLPTRGDPNVIHVG-VKLVYGFESG 109
           D +G + IRGT SYL TK  K  D FSL  AW +   PT GDP V+H G V+LV GF+  
Sbjct: 2   DEKGEKRIRGTTSYLDTKLMKCEDQFSLQIAWTRRWSPTNGDPKVMHRGVVRLVPGFQDW 61

Query: 110 FLCCSNSQMVARMAIGPPAEWP 131
                 S  VA +AI PP EWP
Sbjct: 62  L----RSHRVAMIAIDPPIEWP 79

The following BLAST results are available for this feature:
BLAST of MELO3C029759 vs. NCBI nr
Match NameE-valueIdentityDescription
ERM98960.15.3e-1050.00hypothetical protein AMTR_s00226p00007010 [Amborella trichopoda][more]
BLAST of MELO3C029759 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029759 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
W1NUL52.6e-1050.00Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00226p00007010... [more]
BLAST of MELO3C029759 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029759.1MELO3C029759.1mRNA