MELO3C029719 (gene) Melon (DHL92) v4

Overview
NameMELO3C029719
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr02: 21622338 .. 21627838 (+)
RNA-Seq ExpressionMELO3C029719
SyntenyMELO3C029719
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATATAGATCTGAGCCCAATGAATTCACGTTGTCTTCTTAAGACAAATTTACTCATCCTAGTGCTTGAGTTTTTAGAGTAATTGTCTCCCAAGATAGAACAGATTACCTTTCTTCTAAGCGTAACACCCCGTCTAGAAGATCAACGAACAAAACTTTGTAGATCTATCGAACGTGAAGATTGTGGATAATGGAAAAAAAATAGTTTTTGGAAGAGACATGATAATGAAAATTTTCCTCTTCTTCAACCAAATAGAAAATGACCTATTTATAGACTTATTCGTGGCCATTCAAAAAGTCGTGTCCTTTTTTCTATAACACTTTTCATGAAACGATGCATCCACTCATGATGCATCTATTCATGAAGAAACACAAATAGTTATCGGTTTTCATGAAGTGATGCATCCATTCATGATACATCCGTTCATGAAGAAACACGAACAATAACCATTTATTCCAACAAATATCATTTCCTATTTTGTATTCACTTTGTCTATAATTATGTCTGTATATTATAAATGTGATTAAGCAAATACACTGATATTCAATAACAAATAGTATGATATCAGAGACAATATTTTGACCTAGCCACCGCCCTCAGCTTTGCCATCCACTGCCTCCAACTCCGTCGTCGACGTGCTCAGATCTGCAGATCCGTTATGCACGCTGTATTGATGAAGAAGAAAGTCGCGCTTCGCCATTCCGTTTTGATTCAACGACGATAAAGTTTCGATCCACCTGTTTCAGATCTGACGTTTGTTCTGGTTCCGTTCTAATTTTGATGAAGTTCTGATCCACCTTCCGCAGCTTACATGTTCAATTTCGATCCCACGAAACTCAGATCGAAGTCCATATCCAACAGTGCTCATATTCGTTCAGCATATCAGTCTGATTTTGTTTTGATTCCGGTCTCGATTTGCTCTGTTTTATCTTACCTAGGTTATCTCAGTTTAATCTATCTGATTTGCTTTACACAGCTCCGATTCCGTCCAATTTGCTTTGCGTTGGTTATTTCACCTATGATTGCTTTGGTTTTTGCGATCACTTGCTATCAAATCTGGATTTGTGCTCTGGTTTTCATTTTCTTTAATTTCTGATTTCTGAATTGTGATCTTTATGTTGTGAACCTTTTGCTTACAGATTTGAATATAAAGTTTAATATGTATCTGACTTGTTTGGACTAATTTCTATTATTTTTAGGATGGAGAAAAATGAAATAGCAAGTCTTATTAGCACTATTCTTAATGGCATGAACTACATTACCTAGGCCTATCAGATGAGAAGTTTTTTGATCGTTCAAAAGTTATGGCGAATAGTTAGGGAAGATATCACCAAATCTGTCAAACCCACTCCTCCAATGAAAATCACGGTAAAAACAACATTTAGAATAATGGTGAAGATGTAAAGGATGTTAAGTACATTGAATGACTTGAGGACTGGGATAGCAAAAGTCATCAAATCATCACTTGATTGGGTAACACTTCTATTCCAGCTACTCATACTCAATTTGATGCATTTGATACTGCAAAAGAACTTTAGGATTTTCTGTCTACACTTTTTTAATCTATAGGGCTTGCTCATTATTATCAATTACATTCTAGACTTGTTAGCCTAAATCAAAAGGTGGGACAATTTATGAACAAATATCTCACCACTCTTTAGCCCATTTAGACTCAGTTAGATTAGGCAAAAATCAGTCCTGACCATATTCGCCTCATAAAAGTCTTAATGGATCTTCGACCAGAGTATGAATCAATCGTGCTGCTCTGTTACATTGTAACCCCCTGCCTTCTCTCGACATTGTTGTTTAGGAAATTTTATTTAAGGAGAAAATACTTGGTATTGTCTCCTCTTTGTTCTCTAACATCAGTCCTGCAACTACGCATCCACAACCTGCTCATGAGACCACTTTCTACAAAAAATTGTAAACTTCATGGTCATAAGTTTGCTAACTTTCCTACCATTGATTGCAGGTATTGTCACAAACAAGGTCACATCATGGATAACTATCCAACTTGCCCACCTCGTCCTCCTAGTCACTCACATAAACTCAAGTTTTCTCCTAAAGCTAGTTTTTCATCAGTTGTTGTTGCTGCCACACCATCTAATATCACTGCAACTCTAAGCTTTTAGTTAACTGATCTTCATGACTTACTGAAATAGATAATCTCTTCCAACTCTACTGCCCTTGCTGTCACCCCAGGTACCTTTTGGCTCCTTGACTCGACTTGTTGTAATCATATGACTACTGACATTTCACTGTTATCCTCCCTATTCATGTTCAATCACTTCCTCTAATTTTCTCTTCTAATGGTAATCACATGTCTACTTCTCACATTGGCACTGTTAATACATCCACCATAAATCTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGTCTCTGTTGGCCAATTATGTAATCTAGGACTAACCATTGTCTTTTCTTCTCATGGTTATCAGGTTCAGAATCCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGACAATTATTTGAGCTCACATCTCTCTAGCACTCTCCTATGTTTCCAGTCATCTCTGCTCCTGTCACTGATAACATTATATATCAGTGGCATCTTCGCCTAGGTCATGCATTCTCTTTTAAACTTCGTAGTTTAGCTTCTACTGGTATTTTTAATAATGTTTCTAAGTTTAGTCCTTTTAATTTTTTAATTTACAAACTTGTGAAACAACCTGCTTTGTCCTTTATTAATTCTGCTTCTTTATGTGATAAATCTTTTGGTCTAATTCACTCTGATATTTGGGGTCCTACTCCATGTACTAATGTTAATGGTTATCGATATTTTGTCTTATTTATTGATGACTATTCTCGTTTTACTTAGATTTATTTTCTTAAAAATTGTTCCTCCTTGTATCAAATCTATGTTGATTTTGCAAATATGGTTCACACACAATTCTCTAGCACAATCAAAATTCTTCGCACCGATAGTGCAATGGAATATAAGGACTCTCGCTTTCTTTCTTTCATTGCCCAACAAGGCGCCTTGATTCAATGCTCATGTCCTCACACCTCCCAGCAAATAGACGAGCAGAACACAAACATTGTCACATTCTAAACTCTGTTCTTGCTCAACTCCTCTCTGCTTCCTGTTCTGAAAATTTTTGGAGAGAGGCTACCTTCACCTCTATTTATGTCATCAACTGCCTTCCTTCTCAAGTCGTACACAATGTTTGTCCCTTTGAACGACTATACGATACTCCCACTTCTTACTCTAATCTCAAAGTATTTGGTTGTGCATGCTTTGTGTTATTACATCCTCATGAACATACCTAACTTAAACCTCGTGCTCGTCTATGTTGTTTCTTGGGTTATGGCACTGAACATAAATGTTTTTATTGTTGGGATCCCATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTATAGTCTTTCTTCATTTCAGGCCTCTCTATCTCGTCCTTACCCATTCTTCACTGATCCGTTTACTAATTTATTCCCCACTTCTGATTCACCACCCGACACTACACCTTGTCCTCCACTCACATCTGAGCTCACTCAGTCTTACACTATCTTTGCGCTCCCGGATCTTACATGTGCCCCTTGTGAGGAACCTGAACCTACACATGTTCGGTGATCCACCAGGTAAGAGAAACTTCTTCACATCTCAAAGATTACCATTGTTTTCCACTATTATGTCTTTAATTGAACTTTCCTCGTATAAGGAAGCCAGTACTAACCCCTTGTGGCAACAAGCAATGAATGAAGAACTTCAAACCTTAAAGAAGACTCATACTTGGGACTATGTTGACTTACCTCCTAGAAAGAAACCTATTGACTGTCATTGGATTTTTAAAATAAAAACATACTCTAATGGCACTATTGAACAATTTAAAGCACAACTTGTTGCCTAAGGTTATTCTCAAGAATATTGTCACACCCCCTCCCTAACTACCTACTAGCTTAGCCCAAAAGACGACGTGAAGTCAACTGACATTGCTCTCCTCTAACAATATCTATCGACTCTACTAAACTCTTGAACCTGATAAACATGCTAATCTTGTCTATAAACTACTTTACATGCAACACAATACAGCGAAACCTAGACCAATCATAGAGATACATGAAGTGTAGCCTTGAAATAACTAATTTAGCAAGAAAACCTGATGGAGACACCTTAACCAAAAACATAACCAACAAAGGTTTATATAACTGCAACACTTAGAGCTTACACAAACTGTAGAGTATCTATATCTTACAGACATATACAACATAACAAAACAGACTCTATGTACAACTCCAACCACGTACTGACAATCGATATAGGAGCTTTAGCAAACTAAGGCTATCTATCAGGCACTGAGAGCTTGATCTGTACCTGAAAATTGGTAAAACATTTTGGAAGAGTAAGCTATAAAGCTTAGTGAGTGACTCAATTTAAAACTATAAATTTAAAGATAAGAGCACGTAAAAACTTTATGCATATAAATCTCTTTAATCAAGCTGTAAATATAAATGTATACTAATAAGAATAGCTTTCTCAAATAATCAAGGCATATCAAGTATATCAAAAAATTTTAACTAACATGACAAATCTACATTGTGTAAGACACGCCTAGTACAACCAACGTTTATAAGCTCTACAATGTAATGAAGCTCGCCCAGCACTCCCATCGTCTTTGTCGTAGTGGGACCCATCCAACATTCACGACAACATTGTTGTTACGGAGTACGCTCAACGTTAACAACGGAAGCTAACCTATGCCCACAGGGTACCATATAGCCTCGGACTTAACATCTCAGTCATGTAGTTAATAGAAACATTAAAAAATCATTAAAACATGTATGCTATCTTTATCTTTCGTAAAGCTCAAGCTTACTCAGATTGTTCGTAAAAAACTGAAAATCTAAAAATAATACTTGCTTAAAATGATATGGTTTCAGCTACTTTTCAGAAAGTCAATAATAATGTGCTCATATATAAATTTCATCATAAAACTTAAGCTTAAACTTATACTTGAAACGATTCATAGAAATCATGTACTATTCATAGAAATATAATCATAGATAACATTTTAGAAATCTGTTTTGAAATCTGTTTTGTCACTCACAGCCTTAGGCTAGTTCCTTGGTGTGTAAACTCGACTTATTTCCTATTTATCTGTCAAACAAAACAAAACAAAGCATCAAAACCTTATATAGTCTGATATCTTTATACGAACTTTTGGTGACACACAAACAATGACATTCAACTATTCCTCACCTTTTAATTCTTTTGAAGGAGTTCAAACTAATGCAAAAATTAGAAGATGTCTGTGAACATCAAGCTTTTGCCATGGTTGTCTATCCCTTCATGATTTTCTTCATCTCTTTCACCTTAATTCACAGCCCTTTCCTCTTCTTTTTCTTTCTCAGATTCTACCTCAACATCTCTCTGAAGTTTAAGGACCCTAGGAGATGA

mRNA sequence

ATGTATATAGATCTGAGCCCAATGAATTCACGTTGTCTTCTTAAGACAAATTTACTCATCCTAGTGCTTGAGTTTTTAGACCACCGCCCTCAGCTTTGCCATCCACTGCCTCCAACTCCGTCGTCGACGTGCTCAGATCTGCAGATCCGTTATGCACGCTGTATTGATGAAGAAGAAAGTCGCGCTTCGCCATTCCGTTTTGATTCAACGACGATAAATTCTGATCCACCTTCCGCAGCTTACATGTTCAATTTCGATCCCACGAAACTCAGATCGAAGTCCATATCCAACAGTGCTCATATTCGTTCAGCATATCAGTCTGATTTTGTTTTGATTCCGGTCTCGATTTGCTCTGTTTTATCTTACCTAGGTTATCTCAGTTTAATCTATCTGATTTGCTTTACACAGCTCCGATTCCGTCCAATTTGCTTTGCGTTGGTTATTTCACCTATGATTGCTTTGGTTTTTGCGATCACTTGCTATCAAATCTGGATTTGTGCTCTGTTATGGCGAATAGTTAGGGAAGATATCACCAAATCTGTCAAACCCACTCCTCCAATGAAAATCACGGAGAAAATACTTGGTATTGTCTCCTCTTTGTTCTCTAACATCAGTCCTGCAACTACGCATCCACAACCTGCTCATGAGACCACTTTCTACAAAAAATTGTATTGTCACAAACAAGGTCACATCATGGATAACTATCCAACTTGCCCACCTCGTCCTCCTAGTCACTCACATAAACTCAAGTTTTCTCCTAAAGCTAGTTCAGAATCCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGACACGCCTAGTACAACCAACGTTTATAAGCTCTACAATGTAATGAAGCTCGCCCAGCACTCCCATCGTCTTTGTCGTAGTGGGACCCATCCAACATTCACGACAACATTGTTGTTACGGAGTACGCTCAACGAGTTCAAACTAATGCAAAAATTAGAAGATGTCTGTGAACATCAAGCTTTTGCCATGGTTGTCTATCCCTTCATGATTTTCTTCATCTCTTTCACCTTAATTCACAGCCCTTTCCTCTTCTTTTTCTTTCTCAGATTCTACCTCAACATCTCTCTGAAGTTTAAGGACCCTAGGAGATGA

Coding sequence (CDS)

ATGTATATAGATCTGAGCCCAATGAATTCACGTTGTCTTCTTAAGACAAATTTACTCATCCTAGTGCTTGAGTTTTTAGACCACCGCCCTCAGCTTTGCCATCCACTGCCTCCAACTCCGTCGTCGACGTGCTCAGATCTGCAGATCCGTTATGCACGCTGTATTGATGAAGAAGAAAGTCGCGCTTCGCCATTCCGTTTTGATTCAACGACGATAAATTCTGATCCACCTTCCGCAGCTTACATGTTCAATTTCGATCCCACGAAACTCAGATCGAAGTCCATATCCAACAGTGCTCATATTCGTTCAGCATATCAGTCTGATTTTGTTTTGATTCCGGTCTCGATTTGCTCTGTTTTATCTTACCTAGGTTATCTCAGTTTAATCTATCTGATTTGCTTTACACAGCTCCGATTCCGTCCAATTTGCTTTGCGTTGGTTATTTCACCTATGATTGCTTTGGTTTTTGCGATCACTTGCTATCAAATCTGGATTTGTGCTCTGTTATGGCGAATAGTTAGGGAAGATATCACCAAATCTGTCAAACCCACTCCTCCAATGAAAATCACGGAGAAAATACTTGGTATTGTCTCCTCTTTGTTCTCTAACATCAGTCCTGCAACTACGCATCCACAACCTGCTCATGAGACCACTTTCTACAAAAAATTGTATTGTCACAAACAAGGTCACATCATGGATAACTATCCAACTTGCCCACCTCGTCCTCCTAGTCACTCACATAAACTCAAGTTTTCTCCTAAAGCTAGTTCAGAATCCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGACACGCCTAGTACAACCAACGTTTATAAGCTCTACAATGTAATGAAGCTCGCCCAGCACTCCCATCGTCTTTGTCGTAGTGGGACCCATCCAACATTCACGACAACATTGTTGTTACGGAGTACGCTCAACGAGTTCAAACTAATGCAAAAATTAGAAGATGTCTGTGAACATCAAGCTTTTGCCATGGTTGTCTATCCCTTCATGATTTTCTTCATCTCTTTCACCTTAATTCACAGCCCTTTCCTCTTCTTTTTCTTTCTCAGATTCTACCTCAACATCTCTCTGAAGTTTAAGGACCCTAGGAGATGA

Protein sequence

MYIDLSPMNSRCLLKTNLLILVLEFLDHRPQLCHPLPPTPSSTCSDLQIRYARCIDEEESRASPFRFDSTTINSDPPSAAYMFNFDPTKLRSKSISNSAHIRSAYQSDFVLIPVSICSVLSYLGYLSLIYLICFTQLRFRPICFALVISPMIALVFAITCYQIWICALLWRIVREDITKSVKPTPPMKITEKILGIVSSLFSNISPATTHPQPAHETTFYKKLYCHKQGHIMDNYPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMKLAQHSHRLCRSGTHPTFTTTLLLRSTLNEFKLMQKLEDVCEHQAFAMVVYPFMIFFISFTLIHSPFLFFFFLRFYLNISLKFKDPRR
Homology
[Close]
BLAST of MELO3C029719 vs. NCBI nr
Match: TYK06682.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-15
Identity = 62/134 (46.27%), Postives = 76/134 (56.72%), Query Frame = 0 

Query: 169 LWRI-VREDITKSVKPTPPMK---------ITEKILGIVSSLFSNISPATTHPQPAHETT 228
           LWRI VREDITK VKPTPP+            EK L IVSS+ S+++ ATTH +  +ET+
Sbjct: 819 LWRIVVREDITKPVKPTPPVTNIAVVQKILFEEKRLDIVSSMPSDVAFATTHLRQTNETS 878

Query: 229 FYKKL----------------YCHKQGHIMDNYPTCPPRPPSHSHKLKFSPKASSESSDG 277
           FYK                  YCHK+GHI+D+ P  PPRP  HSHK KFS KA S S   
Sbjct: 879 FYKNCKLHGHKFAYCPSIGCRYCHKRGHILDHCPIRPPRPTGHSHKPKFSSKAGSPSVVI 938

[Close]
BLAST of MELO3C029719 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-12
Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 191 EKILGIVSSLFSNISPATTHPQPAHETTFYKKL----------------YCHKQGHIMDN 250
           EK LGIVSSL S+++ ATTH + A+ET F K                  YCHK+GHI+DN
Sbjct: 198 EKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDN 257

Query: 251 YPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMK 287
            PT PPRPP HSHK KFS KA S S    +    TE  PS+  +  L++++K
Sbjct: 258 CPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITE--PSSLQLTDLHDLLK 307

[Close]
BLAST of MELO3C029719 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-12
Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 191 EKILGIVSSLFSNISPATTHPQPAHETTFYKKL----------------YCHKQGHIMDN 250
           EK LGIVSSL S+++ ATTH + A+ET F K                  YCHK+GHI+DN
Sbjct: 166 EKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDN 225

Query: 251 YPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMK 287
            PT PPRPP HSHK KFS KA S S    +    TE  PS+  +  L++++K
Sbjct: 226 CPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITE--PSSLQLTDLHDLLK 275

[Close]
BLAST of MELO3C029719 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-12
Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 191 EKILGIVSSLFSNISPATTHPQPAHETTFYKKL----------------YCHKQGHIMDN 250
           EK LGIVSSL S+++ ATTH + A+ET F K                  YCHK+GHI+DN
Sbjct: 198 EKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDN 257

Query: 251 YPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMK 287
            PT PPRPP HSHK KFS KA S S    +    TE  PS+  +  L++++K
Sbjct: 258 CPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITE--PSSLQLTDLHDLLK 307

[Close]
BLAST of MELO3C029719 vs. NCBI nr
Match: KAA0058316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-11
Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 0 

Query: 191 EKILGIVSSLFSNISPATTHPQPAHETTFYKKL----------------YCHKQGHIMDN 250
           EK LGIVSSL S+++ ATTH + A+ET F K                  YCHK+GHI+DN
Sbjct: 198 EKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECKYCHKRGHILDN 257

Query: 251 YPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMK 287
            PT PPRPP HSHK KF  KA S S    +    TE  PS+  +  L++++K
Sbjct: 258 CPTRPPRPPGHSHKPKFFHKAGSSSVVAAATSDITE--PSSLQLTDLHDLLK 307

[Close]
BLAST of MELO3C029719 vs. ExPASy TrEMBL
Match: A0A5D3C5W5 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001760 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.0e-16
Identity = 62/134 (46.27%), Postives = 76/134 (56.72%), Query Frame = 0 

Query: 169 LWRI-VREDITKSVKPTPPMK---------ITEKILGIVSSLFSNISPATTHPQPAHETT 228
           LWRI VREDITK VKPTPP+            EK L IVSS+ S+++ ATTH +  +ET+
Sbjct: 819 LWRIVVREDITKPVKPTPPVTNIAVVQKILFEEKRLDIVSSMPSDVAFATTHLRQTNETS 878

Query: 229 FYKKL----------------YCHKQGHIMDNYPTCPPRPPSHSHKLKFSPKASSESSDG 277
           FYK                  YCHK+GHI+D+ P  PPRP  HSHK KFS KA S S   
Sbjct: 879 FYKNCKLHGHKFAYCPSIGCRYCHKRGHILDHCPIRPPRPTGHSHKPKFSSKAGSPSVVI 938

[Close]
BLAST of MELO3C029719 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-12
Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 191 EKILGIVSSLFSNISPATTHPQPAHETTFYKKL----------------YCHKQGHIMDN 250
           EK LGIVSSL S+++ ATTH + A+ET F K                  YCHK+GHI+DN
Sbjct: 198 EKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDN 257

Query: 251 YPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMK 287
            PT PPRPP HSHK KFS KA S S    +    TE  PS+  +  L++++K
Sbjct: 258 CPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITE--PSSLQLTDLHDLLK 307

[Close]
BLAST of MELO3C029719 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-12
Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 191 EKILGIVSSLFSNISPATTHPQPAHETTFYKKL----------------YCHKQGHIMDN 250
           EK LGIVSSL S+++ ATTH + A+ET F K                  YCHK+GHI+DN
Sbjct: 198 EKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDN 257

Query: 251 YPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMK 287
            PT PPRPP HSHK KFS KA S S    +    TE  PS+  +  L++++K
Sbjct: 258 CPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITE--PSSLQLTDLHDLLK 307

[Close]
BLAST of MELO3C029719 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-12
Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 0 

Query: 191 EKILGIVSSLFSNISPATTHPQPAHETTFYKKL----------------YCHKQGHIMDN 250
           EK LGIVSSL S+++ ATTH + A+ET F K                  YCHK+GHI+DN
Sbjct: 166 EKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDN 225

Query: 251 YPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMK 287
            PT PPRPP HSHK KFS KA S S    +    TE  PS+  +  L++++K
Sbjct: 226 CPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITE--PSSLQLTDLHDLLK 275

[Close]
BLAST of MELO3C029719 vs. ExPASy TrEMBL
Match: A0A5A7UVX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006520 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.4e-12
Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 0 

Query: 191 EKILGIVSSLFSNISPATTHPQPAHETTFYKKL----------------YCHKQGHIMDN 250
           EK LGIVSSL S+++ ATTH + A+ET F K                  YCHK+GHI+DN
Sbjct: 198 EKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECKYCHKRGHILDN 257

Query: 251 YPTCPPRPPSHSHKLKFSPKASSESSDGTSDWYGTEDTPSTTNVYKLYNVMK 287
            PT PPRPP HSHK KF  KA S S    +    TE  PS+  +  L++++K
Sbjct: 258 CPTRPPRPPGHSHKPKFFHKAGSSSVVAAATSDITE--PSSLQLTDLHDLLK 307

The following BLAST results are available for this feature:
BLAST of MELO3C029719 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK06682.11.0e-1546.27LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof... [more]
KAA0043149.13.1e-1246.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0065380.13.1e-1246.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0036574.13.1e-1246.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0058316.11.5e-1145.54Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
BLAST of MELO3C029719 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029719 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C5W55.0e-1646.27LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof... [more]
A0A5D3DG181.5e-1246.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7SZ661.5e-1246.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7VDW01.5e-1246.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UVX47.4e-1245.54Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
BLAST of MELO3C029719 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029719.1MELO3C029719.1mRNA