MELO3C029712 (gene) Melon (DHL92) v4

Overview
NameMELO3C029712
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr02: 21334160 .. 21335704 (-)
RNA-Seq ExpressionMELO3C029712
SyntenyMELO3C029712
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTGTACTTCTGTTAGTACTGCAGTCTATAACATTCGGGTGGCATTCGACCATTGGGTCGTTTCCGTGCAGGGTCTCTACAGTAATCATATATCATGTACTTCTTCCTAACTTGACCAAGCTTGGCCAACTGACGAACGGTAAGCTGAGAATGATCAGGAGAAGTCCACCAGTTTTGTGAAGACTTGGTGGCACATTGGGTATTGCTGAGCTCTCCAATCCAATGACAAGCTCTTGGCCTGAATTGGCGGATGGTAGCAGTGAATGGTGCATTATTCCAATTTGTTTTGACACGACCTCCTTGAGTTGCCCAATCATCTGCGTTCCATAAACTTGTATAAAATCTCATGCCTTTCTTGTTTGGGTATGCTTTTCTTCGCTCCAACTTCTCGTAGTTTCGGAATACTCTTATTGGGATACTGTCGATATACCACCTGAAAATCATCCAAACCGACCGATATTATTTTTATTTAAAAGAAATTTTTTTGTAAATTGGTAAAACTATTTACAAAATATAGATTTTATCAATAATATAAACTCATTCATACAATCTACGGTTGAAGTCTTATTTTGATGAAAATGAGGTTTAGAGTACAAAATTCAAATGGATAAACTTAGGCTCTTTTTACTAATCATTTGGTTTTTTAAAATTAAACATCTTTTCTGTAGCATTCTTACTATGTTGCCAAATTCCAATAAATGGTTAACAAACACGACGTTAGGAAGTTTATGATTTCAGTAATGAAATGTTCACTTACACAACAGTACTAGGATTCCAATGAATTGTGTAGTTATGAAAATCAGCAGTAGGGTCAAACCACAATCGAAACTGCTGTTCTCTATGTCCTACACCCTCAACAAATATGTTTGTGTGAATTGTATAAGGCTCTCCTGTAGCATTCCCCAAAAACTCATAATCTATCTCATCATGATACGTCCCTGAAGAAGATAACTACAAAAAAAAAAAAAAAAAAAGAATTAGCACCACGAACTCATGTGTCCTTCATGTCAGTTATATCATGCTTCAATGACCAAGTATGAACTGTATATTCTCCTGTAAATTGTTTAATCATTTTCCTTTTCTCAGGGTTCAAAAAAGTTCACTCTATAAACTTTCTATCCTCAAAGACGCTATTTATTTGGTATTTTGTAGCATTATCTTTAATAAAATTGTTCTTCCTATGCTCTAGAAACACTACCAACATATACGTAAACCTATTTGACGATCTTTTGTATTCTTTGACTTATGTCGATTTCTTAGCACTTCATAATTTGTAACATTATTGTTTAGATTGAACCATACGTAAAATGCTGTAACTAATCCTGCAGAATCCCCTGGAACAAGCTTGATGAGAGCTTCAAAGCTTCCAAATAAGAAATTTCGCTTTGACTTTGCTCCCGAGCCTGTGATAACGAAATCATGACAAGATGAATTTGTTTATTTTGCGCACAACGGTATGAGAAATAACATGGAAGACATGGTGAAAGGAAGCAAGAAGTGATTTTTTTTTTTTTTTCTTTCATCACCTGTGCTTTTGTCCA

mRNA sequence

ATGCATTGTACTTCTGTTAGTACTGCAGTCTATAACATTCGGGTGGCATTCGACCATTGGGTCGTTTCCGTGCAGGGTCTCTACAAATCCCCTGGAACAAGCTTGATGAGAGCTTCAAAGCTTCCAAATAAGAAATTTCGCTTTGACTTTGCTCCCGAGCCTGTGATAACGAAATCATGACAAGATGAATTTGTTTATTTTGCGCACAACGGTATGAGAAATAACATGGAAGACATGGTGAAAGGAAGCAAGAAGTGATTTTTTTTTTTTTTTCTTTCATCACCTGTGCTTTTGTCCA

Coding sequence (CDS)

ATGCATTGTACTTCTGTTAGTACTGCAGTCTATAACATTCGGGTGGCATTCGACCATTGGGTCGTTTCCGTGCAGGGTCTCTACAAATCCCCTGGAACAAGCTTGATGAGAGCTTCAAAGCTTCCAAATAAGAAATTTCGCTTTGACTTTGCTCCCGAGCCTGTGATAACGAAATCATGA

Protein sequence

MHCTSVSTAVYNIRVAFDHWVVSVQGLYKSPGTSLMRASKLPNKKFRFDFAPEPVITKS
Homology
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BLAST of MELO3C029712 vs. NCBI nr
Match: KAG6589933.1 (Transmembrane protein 234-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.6 bits (135), Expect = 8.3e-05
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 2   HCTSVSTAVYNIRVA--FDHWVVSVQGLYKSPGTSLMRASKLPNKKFRFDFAPEPVITKS 60
           H  S+S  +  I  A  + H ++ +Q   +SPGTSLMRASKLPNKK  FDFAPEP  T+S
Sbjct: 236 HAASLSCPIICIPQAGIYPHTLL-LQKFQESPGTSLMRASKLPNKKSLFDFAPEPATTES 294

The following BLAST results are available for this feature:
BLAST of MELO3C029712 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589933.18.3e-0553.33Transmembrane protein 234-like protein, partial [Cucurbita argyrosperma subsp. s... [more]
BLAST of MELO3C029712 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029712 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029712 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029712.1MELO3C029712.1mRNA