MELO3C029662 (gene) Melon (DHL92) v4

Overview
NameMELO3C029662
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Locationchr02: 17720573 .. 17723971 (-)
RNA-Seq ExpressionMELO3C029662
SyntenyMELO3C029662
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGACAGGCTTACCCCACTTTTTGGAAACATCGTCCATCTTTTCAACCGTTTTCGAATGCAGGTAAATCCTCTCTCCAAAGATTTCTTTTCCAAACCTATAATTTGTTGAAATGTGTAACGGAGCATGTAAGGAATGTACACTAAAGTAATTGGAGTTTAAATCCCAAAGCTCGAAATGCTTCAGACGAACACAAAACAAACATACCGTTGACAGACCAGTTTTGACCCCAAGAAAAAAAAACTGAGTACCGGCCATTGTCGTTGGACTTTTTCGGGACGAACACCAGGAGTTCGTCCACTTGGCCCATTTTCTTGGCTCGAAATGCATTTCCAATAGTTCTTTCATGCTCGACAGGCTTTCGCAACCTTTTGGAAACATCGTCGATCTTTTCGACCGTTTTCTGATGCACCTAAATCCTCTCTCCAACGATCTAAAAATTGTTAAGACGAACACAAAACAAAGAAACCGTTGATGGACCAGTTTTCACCCCTAGAAAAATAAGTCAGTCTCGGGCATTGTCGTTTGAATTTTTTTGGGACGAACACCAGGAGTTTGTCCACTTGACCCATTTTCTTTACTGGAAATGCATTTCCAATAGTTTTTTCATGCCCGATAGACTTTCGCCACTTTTTGGAAACATCGTCCATCTATTTGACCGTTTTCGTATGCACCTAAATCCTCCCTCCAATGATCCCATTTCCCGACCTATAATTTGTTGAAATGTGTAATGGAGCATGTCGGGAATGTACACTAAAGTAATTGGAGTTGAAATCCCACAGCTCGGAATGCTTAAGACAAACAAAAAACGAAGAAACCGTTGACAGACCAGTTTTGACCCCTAAAAAAATAATTGAGTCCTGGGCATTGTCGTTGGACTTGTTTTAGGAAGAACAGCAGGAGTTCGTCCACTTGGCCCATTTTCTTTGCTGGAAATGCATTTCCAATAGTTTTTTCATGCTCGACAGACTTTCCGAACCTTTTGGAAACATCTTCCATCTTTTCGACCGTTCTCGGATGCACCTAAATCGTCCGTCCAACGATCCCATTTCCTGACCTATAATTTGTTGAAATGTTTAACAGAGCATGTCGGGAATGTACACTAAAGCAATTGGAGTTTAAATCCCACAGCTCAAAATGCTAAAGACGAACACAAAACAAAGAAACCCTTGACAGATCAGTTTTGACCCCTAAAAAAATAACTCAGTTCCAAGCATTGTCACTAGCACGTAGATATTAAATGTTTGGAAAGTATTTAAACCACAATGTTTTAAGCAAAGCATGAATTAGTAAGAACTTTTGTTTTAAGAACTACAGTTTTCCACGAAAGAGCTGAGTAAAGTTCGAGTTTTGTGTAAAATTTATAAACATGCATGTTTTAATTTTTTTAGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTAAGGCTAGAGATTACAGTGTGCACACTGGTTAGATTCCATTGTTGACGTTGAGTGTACTCCGTACCAACGATGCTGTCGTGAGTATTGGGCGGCCCCACTACATCGTAGAGCTTGTAAACGTTATTGTACTGGGTGTACCCTACACATCGTAGATTTGTCATGTTAGTTAAAATGCTTCGATATACTTGATATGCCTTACTAGATTTCAATGACGAACATGCCGAGTATTCGAGGATGCTATTCTTACTACTACACATTTACATTTACGACTTGTATAAACAGATTTACATGTGTAAAGTTTTCACGTGCTCTTATCTTTAAATTCATAGTTTTAAACTGAGTCACTCACTGAGCTTCATAGTTCACCCTTTCCAAAATGTTTTACCCATTTTCCAGGTAGAGATCGAGTTCCCGGAGCCTGATAGACTGCCTTAGTCTGCTGAAGCTTCGTTATCGATTGCCAGTACGTGTTTTGAGTTGGGAATAGAGTTTGTTGTGTTATGATGTATATACACCCTTGTATGTTATAGATACTCCACAGTTTGTATAAGCTTTAGGAGCCGTAGTTGTGTAAATTTTTGTTGGTTATATTTTGATTAAGGTGTCTTTAGGTTTACTCGTGAAATCAGTAAATTTCGAGGTACACTTCATGTATGTGTTTGACTAGCCTAGGATCCGCTGTGTTTTGTTGCATGTATAATAGTTTACATACTAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCTGAGTCGACAGATACAGGTAGAGAAAAGCGTTGTTCGTCGACTTCACGCCATCTTTTGGTCTAAGGTAGCAAGTAGTCCGGGAGGGGGTGGACAACTTGGTATCAGAGCAGTTTGCTCCATGGGAATTAAGGTAGAGCGGTTAGCTCTAAGAAGAAACTGGAAAGTAAATAATTGAAAGTCAAGTTAGCTTAAATGGAACTAGTGGAGTATGGTCTAGGTAAGGGTAGAAGTGAGTCCAATTATAATTAATATGTGAGTAGACATTTAGTATCATGCATTTGAGTTAAGTATTTATAGTATGTCTAATGTGTTGACATATTATAGGAGTCATGCCACCACGTACTGGCAGATGACGCCAGCAGAATCAGGACGGGATGCAAGGTAATACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAAGAGTTCGAGGTGGGGCAGAAAATAAGCAGTTTGCGAGAACAACACAGGAGATAGGAAGGCCAGATAGAGTAGAGCCTAGTGATCTAGAAAAGGCATATGGAATTGAACAGCTGAAGAAGTTAGGGGCTACAGTGTTTGAGGGTTCCACAAATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAATGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGACCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATCAGCAAGGCGTAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCCAAGATAAGTATTATCCCAGCACAATACTGCGAAGCCAAGAGGGAGGAGTTTCTAGGGTTGAAATAAGGATCACTTTCAGTGGCTGAGTATGAGACGAAGTATACCGAGCTTTCACAGTATGCTGACGTTATTGTGGCTTCGGAGAGTGACAGGTGCCGAAGGTTTGAAATAGGGTTGCGTTTTGAAATACGCACCCCTGTTACAGCCATTGCTAAGTGGACAAATTTCTCTGAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGGATAACAGAAGAGAAATCAGCAGTGAAGCTTAGTCGTGGGACTTCAACAGCTAATGGATTTAGAAGCCGTGAGCAGCAGAGGTTCACGCCTGGGATAAATATTTCAAGCCATCAAGACCGTTTTCAACCATTTTTTGAAACAACGTCCATCTTTTCGACCGTTTTCAGATGGACCTAA

mRNA sequence

ATGCTCGACAGGCTTACCCCACTTTTTGGAAACATCGTCCATCTTTTCAACCGTTTTCGAATGCAGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTAAGGCTAGAGATTACAGTGTGCACACTGGTGTCTTTAGGTTTACTCGTGAAATCAGTAAATTTCGAGGTAGAGAAAAGCGTTGTTCGTCGACTTCACGCCATCTTTTGGTCTAAGGTAGCAAGTAGTCCGGGAGGGGGTGGACAACTTGGTATCAGAGCAGTTTGCTCCATGGGAATTAAGGTAGAGCGGAGTCATGCCACCACGTACTGGCAGATGACGCCAGCAGAATCAGGACGGGATGCAAGTACCCTAAGAGTTCGAGGTGGGGCAGAAAATAAGCAGTTTGCGAGAACAACACAGGAGATAGGAAGGCCAGATAGAGTAGAGCCTAGTGATCTAGAAAAGGCATATGGAATTGAACAGCTGAAGAAGTTAGGGGCTACAGTGTTTGAGGGTTCCACAAATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAATGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGACCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATCAGCAAGGCGTAGTGATGCACTGGCTGAGTATGAGACGAAGTATACCGAGCTTTCACAGTATGCTGACGTTATTGTGGCTTCGGAGAGTGACAGGTGCCGAAGGTTTGAAATAGGGTTGCGTTTTGAAATACGCACCCCTGTTACAGCCATTGCTAAGTGGACAAATTTCTCTGAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGGATAACAGAAGAGAAATCAGCAGTGAAGCTTAGTCGTGGGACTTCAACAGCTAATGGATTTAGAAGCCGTGAGCAGCAGAGGTTCACGCCTGGGATAAATATTTCAAGCCATCAAGACCGTTTTCAACCATTTTTTGAAACAACGTCCATCTTTTCGACCGTTTTCAGATGGACCTAA

Coding sequence (CDS)

ATGCTCGACAGGCTTACCCCACTTTTTGGAAACATCGTCCATCTTTTCAACCGTTTTCGAATGCAGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTAAGGCTAGAGATTACAGTGTGCACACTGGTGTCTTTAGGTTTACTCGTGAAATCAGTAAATTTCGAGGTAGAGAAAAGCGTTGTTCGTCGACTTCACGCCATCTTTTGGTCTAAGGTAGCAAGTAGTCCGGGAGGGGGTGGACAACTTGGTATCAGAGCAGTTTGCTCCATGGGAATTAAGGTAGAGCGGAGTCATGCCACCACGTACTGGCAGATGACGCCAGCAGAATCAGGACGGGATGCAAGTACCCTAAGAGTTCGAGGTGGGGCAGAAAATAAGCAGTTTGCGAGAACAACACAGGAGATAGGAAGGCCAGATAGAGTAGAGCCTAGTGATCTAGAAAAGGCATATGGAATTGAACAGCTGAAGAAGTTAGGGGCTACAGTGTTTGAGGGTTCCACAAATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAATGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGACCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATCAGCAAGGCGTAGTGATGCACTGGCTGAGTATGAGACGAAGTATACCGAGCTTTCACAGTATGCTGACGTTATTGTGGCTTCGGAGAGTGACAGGTGCCGAAGGTTTGAAATAGGGTTGCGTTTTGAAATACGCACCCCTGTTACAGCCATTGCTAAGTGGACAAATTTCTCTGAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGGATAACAGAAGAGAAATCAGCAGTGAAGCTTAGTCGTGGGACTTCAACAGCTAATGGATTTAGAAGCCGTGAGCAGCAGAGGTTCACGCCTGGGATAAATATTTCAAGCCATCAAGACCGTTTTCAACCATTTTTTGAAACAACGTCCATCTTTTCGACCGTTTTCAGATGGACCTAA

Protein sequence

MLDRLTPLFGNIVHLFNRFRMQMIYEIFINYMTEILSLRLEITVCTLVSLGLLVKSVNFEVEKSVVRRLHAIFWSKVASSPGGGGQLGIRAVCSMGIKVERSHATTYWQMTPAESGRDASTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEGSTNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDALAEYETKYTELSQYADVIVASESDRCRRFEIGLRFEIRTPVTAIAKWTNFSELVETALRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQDRFQPFFETTSIFSTVFRWT
Homology
BLAST of MELO3C029662 vs. NCBI nr
Match: KAA0046779.1 (uncharacterized protein E6C27_scaffold216G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 402.1 bits (1032), Expect = 4.7e-108
Identity = 211/244 (86.48%), Postives = 217/244 (88.93%), Query Frame = 0

Query: 111 TPAESGRDASTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEG 170
           T   S  ++STLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEG
Sbjct: 5   TQGPSVGESSTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEG 64

Query: 171 STNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDALAEYET 230
           STNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDA A    
Sbjct: 65  STNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDARALDWQ 124

Query: 231 KYTELSQ---YADVIVASE------SDRCRRFEIGLRFEIRTPVTAIAKWTNFSELVETA 290
            +  + Q   Y   I+ S+      SDRCRRFEIGLRFEIRTPVTAIAKWTNFSELVETA
Sbjct: 125 TFRGIFQDKYYPSTILRSQEGGVSRSDRCRRFEIGLRFEIRTPVTAIAKWTNFSELVETA 184

Query: 291 LRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQDRFQPFFETTSIFSTV 346
           LRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQDRFQPFFETTSIFSTV
Sbjct: 185 LRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQDRFQPFFETTSIFSTV 244

BLAST of MELO3C029662 vs. NCBI nr
Match: KAA0042134.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 385.2 bits (988), Expect = 6.0e-103
Identity = 229/359 (63.79%), Postives = 248/359 (69.08%), Query Frame = 0

Query: 28  FINYMTEILSLRLEITVCTLVSLGLLVKSVNFEVEKSVVRRLHAIFWSKVASSPGGG--- 87
           FI     +L+L +      +VSLG LVKSVN EV+KSVVR+LHAIF SKVA SPGGG   
Sbjct: 62  FICLQIPLLTLSVLRNNDAVVSLGFLVKSVNLEVQKSVVRQLHAIFRSKVAGSPGGGVTT 121

Query: 88  --------GQLGIRAVCSMGIKVERSHATTYWQM-----------TPAESGRDASTLRVR 147
                   G  G RAV S   K+ER       +            T   S  ++STL VR
Sbjct: 122 WYQSSLLHGNEG-RAVSSKK-KLERVMPPRTGRRRRQIQDGMQGPTQGPSVGESSTLGVR 181

Query: 148 GGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEGSTNPADAENWLNMLE 207
           GGA N+QF RTT EIGRPDR EPSD EKAYGIE+LKKLGATVFEGST+PADAENWLNMLE
Sbjct: 182 GGAGNEQFVRTTSEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLE 241

Query: 208 KCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDA--------------------- 267
           KCFDVMNCPEERKVRL TFLLQKEAEGWWKSI ARRSDA                     
Sbjct: 242 KCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY 301

Query: 268 -----------------LAEYETKYTELSQYADVIVASESDRCRRFEIGLRFEIRTPVTA 327
                            +AEYE KYTELS+YADVIVASESDRCRRFE GLRFEIRTPVTA
Sbjct: 302 CEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTA 361

BLAST of MELO3C029662 vs. NCBI nr
Match: KAA0035073.1 (uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa])

HSP 1 Score: 373.6 bits (958), Expect = 1.8e-99
Identity = 223/348 (64.08%), Postives = 242/348 (69.54%), Query Frame = 0

Query: 24  IYEIFINYMTEILSLRLEITVCTLVSLGLLVKSVNFE-----VEKSVVRRLHAIFWSKVA 83
           + EI      + LSLR ++     VSLGLLVKSVNFE     V+KSVVRRLHAIF SKVA
Sbjct: 142 VVEIDFPVPVDCLSLR-KLHYRLPVSLGLLVKSVNFESRQIQVQKSVVRRLHAIFRSKVA 201

Query: 84  S--SPGGGGQLGIRAVCSMGIKVERSHATTYWQMTPAESGRDASTLRVRGGAENKQFART 143
               P  G Q              R +       T   S  ++STL VRGGA N+QFART
Sbjct: 202 GVMPPRTGRQ-------------RRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFART 261

Query: 144 TQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEGSTNPADAENWLNMLEKCFDVMNCPEE 203
           TQEIGR DR EPSD EKAYGIE+LKKLGATVFEGST+ ADAENWLNMLEKCFDVMNCPEE
Sbjct: 262 TQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDLADAENWLNMLEKCFDVMNCPEE 321

Query: 204 RKVRLTTFLLQKEAEGWWKSISARRSDA-------------------------------- 263
           RKVRL TFLLQKEA+GWWKSI ARRSDA                                
Sbjct: 322 RKVRLATFLLQKEAKGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGL 381

Query: 264 ------LAEYETKYTELSQYADVIVASESDRCRRFEIGLRFEIRTPVTAIAKWTNFSELV 323
                 +AEYE KYTELS+YADVI+ASESDRCRRFE GLRFEIRTPVTAIAKWTNFS+LV
Sbjct: 382 KQGSLSVAEYERKYTELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLV 441

Query: 324 ETALRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQD 327
           ETALRVEQ ITEEKSAV+LSRGTSTA+GFR REQ+RFTPGIN SS QD
Sbjct: 442 ETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINFSSRQD 475

BLAST of MELO3C029662 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 366.3 bits (939), Expect = 2.9e-97
Identity = 206/311 (66.24%), Postives = 224/311 (72.03%), Query Frame = 0

Query: 55  KSVNFEVEKSVVRRLHAIFWSKVAS-SPGGGGQLGIRAVCSMGIKVERSHATTYWQMTPA 114
           +S   +V+K+VVRRLHAIF SKVA   P   G            +  R +       T  
Sbjct: 224 QSRQIQVQKNVVRRLHAIFRSKVAGVMPPRTG------------RRRRQNQDGMQGPTQG 283

Query: 115 ESGRDASTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEGSTN 174
            S  ++STL VRGGA N+QFARTTQEIGR DR EPSD EKAYGIE+LKKLGATVFEGST+
Sbjct: 284 PSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTD 343

Query: 175 PADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDA--------- 234
           PADAENWLNMLEKCFDVMNCPEERKVRL TFLLQKEAEGWWKSI ARRSDA         
Sbjct: 344 PADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR 403

Query: 235 -----------------------------LAEYETKYTELSQYADVIVASESDRCRRFEI 294
                                        +AEYE KYTELS+YADVI+ASESDRCRRFE 
Sbjct: 404 GIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRFER 463

Query: 295 GLRFEIRTPVTAIAKWTNFSELVETALRVEQRITEEKSAVKLSRGTSTANGFRSREQQRF 327
           GLRFEIRTPVTAIAKWTNFS+LVETALRVEQ ITEEKSAV+LSRGTSTA+GFR REQ+RF
Sbjct: 464 GLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRF 522

BLAST of MELO3C029662 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 2.1e-92
Identity = 187/254 (73.62%), Postives = 199/254 (78.35%), Query Frame = 0

Query: 111 TPAESGRDASTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEG 170
           T   S  ++STL VRGGA N+QFARTTQEIGR DR EPSD EKAYGIE+LKKLGATVFEG
Sbjct: 58  TQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEG 117

Query: 171 STNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDA------ 230
           ST+PADAENWLNMLEKCFDVMNCPEERKVRL TFLLQKEAEGWWKSI ARRSDA      
Sbjct: 118 STDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQ 177

Query: 231 --------------------------------LAEYETKYTELSQYADVIVASESDRCRR 290
                                           +AEYE KYTELS+YADVI+ASESDRCRR
Sbjct: 178 TFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRR 237

Query: 291 FEIGLRFEIRTPVTAIAKWTNFSELVETALRVEQRITEEKSAVKLSRGTSTANGFRSREQ 327
           FE GLRFEIRTPVTAIAKWTNFS+LVETALRVEQ ITEEKSAV+LSRGTSTA+GFR REQ
Sbjct: 238 FERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQ 297

BLAST of MELO3C029662 vs. ExPASy TrEMBL
Match: A0A5A7TZW1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00650 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 2.3e-108
Identity = 211/244 (86.48%), Postives = 217/244 (88.93%), Query Frame = 0

Query: 111 TPAESGRDASTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEG 170
           T   S  ++STLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEG
Sbjct: 5   TQGPSVGESSTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEG 64

Query: 171 STNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDALAEYET 230
           STNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDA A    
Sbjct: 65  STNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDARALDWQ 124

Query: 231 KYTELSQ---YADVIVASE------SDRCRRFEIGLRFEIRTPVTAIAKWTNFSELVETA 290
            +  + Q   Y   I+ S+      SDRCRRFEIGLRFEIRTPVTAIAKWTNFSELVETA
Sbjct: 125 TFRGIFQDKYYPSTILRSQEGGVSRSDRCRRFEIGLRFEIRTPVTAIAKWTNFSELVETA 184

Query: 291 LRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQDRFQPFFETTSIFSTV 346
           LRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQDRFQPFFETTSIFSTV
Sbjct: 185 LRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQDRFQPFFETTSIFSTV 244

BLAST of MELO3C029662 vs. ExPASy TrEMBL
Match: A0A5A7TFC5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006220 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.9e-103
Identity = 229/359 (63.79%), Postives = 248/359 (69.08%), Query Frame = 0

Query: 28  FINYMTEILSLRLEITVCTLVSLGLLVKSVNFEVEKSVVRRLHAIFWSKVASSPGGG--- 87
           FI     +L+L +      +VSLG LVKSVN EV+KSVVR+LHAIF SKVA SPGGG   
Sbjct: 62  FICLQIPLLTLSVLRNNDAVVSLGFLVKSVNLEVQKSVVRQLHAIFRSKVAGSPGGGVTT 121

Query: 88  --------GQLGIRAVCSMGIKVERSHATTYWQM-----------TPAESGRDASTLRVR 147
                   G  G RAV S   K+ER       +            T   S  ++STL VR
Sbjct: 122 WYQSSLLHGNEG-RAVSSKK-KLERVMPPRTGRRRRQIQDGMQGPTQGPSVGESSTLGVR 181

Query: 148 GGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEGSTNPADAENWLNMLE 207
           GGA N+QF RTT EIGRPDR EPSD EKAYGIE+LKKLGATVFEGST+PADAENWLNMLE
Sbjct: 182 GGAGNEQFVRTTSEIGRPDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLE 241

Query: 208 KCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDA--------------------- 267
           KCFDVMNCPEERKVRL TFLLQKEAEGWWKSI ARRSDA                     
Sbjct: 242 KCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY 301

Query: 268 -----------------LAEYETKYTELSQYADVIVASESDRCRRFEIGLRFEIRTPVTA 327
                            +AEYE KYTELS+YADVIVASESDRCRRFE GLRFEIRTPVTA
Sbjct: 302 CEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTA 361

BLAST of MELO3C029662 vs. ExPASy TrEMBL
Match: A0A5A7SX02 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001380 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 8.7e-100
Identity = 223/348 (64.08%), Postives = 242/348 (69.54%), Query Frame = 0

Query: 24  IYEIFINYMTEILSLRLEITVCTLVSLGLLVKSVNFE-----VEKSVVRRLHAIFWSKVA 83
           + EI      + LSLR ++     VSLGLLVKSVNFE     V+KSVVRRLHAIF SKVA
Sbjct: 142 VVEIDFPVPVDCLSLR-KLHYRLPVSLGLLVKSVNFESRQIQVQKSVVRRLHAIFRSKVA 201

Query: 84  S--SPGGGGQLGIRAVCSMGIKVERSHATTYWQMTPAESGRDASTLRVRGGAENKQFART 143
               P  G Q              R +       T   S  ++STL VRGGA N+QFART
Sbjct: 202 GVMPPRTGRQ-------------RRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFART 261

Query: 144 TQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEGSTNPADAENWLNMLEKCFDVMNCPEE 203
           TQEIGR DR EPSD EKAYGIE+LKKLGATVFEGST+ ADAENWLNMLEKCFDVMNCPEE
Sbjct: 262 TQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDLADAENWLNMLEKCFDVMNCPEE 321

Query: 204 RKVRLTTFLLQKEAEGWWKSISARRSDA-------------------------------- 263
           RKVRL TFLLQKEA+GWWKSI ARRSDA                                
Sbjct: 322 RKVRLATFLLQKEAKGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGL 381

Query: 264 ------LAEYETKYTELSQYADVIVASESDRCRRFEIGLRFEIRTPVTAIAKWTNFSELV 323
                 +AEYE KYTELS+YADVI+ASESDRCRRFE GLRFEIRTPVTAIAKWTNFS+LV
Sbjct: 382 KQGSLSVAEYERKYTELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLV 441

Query: 324 ETALRVEQRITEEKSAVKLSRGTSTANGFRSREQQRFTPGINISSHQD 327
           ETALRVEQ ITEEKSAV+LSRGTSTA+GFR REQ+RFTPGIN SS QD
Sbjct: 442 ETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINFSSRQD 475

BLAST of MELO3C029662 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.4e-97
Identity = 206/311 (66.24%), Postives = 224/311 (72.03%), Query Frame = 0

Query: 55  KSVNFEVEKSVVRRLHAIFWSKVAS-SPGGGGQLGIRAVCSMGIKVERSHATTYWQMTPA 114
           +S   +V+K+VVRRLHAIF SKVA   P   G            +  R +       T  
Sbjct: 224 QSRQIQVQKNVVRRLHAIFRSKVAGVMPPRTG------------RRRRQNQDGMQGPTQG 283

Query: 115 ESGRDASTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEGSTN 174
            S  ++STL VRGGA N+QFARTTQEIGR DR EPSD EKAYGIE+LKKLGATVFEGST+
Sbjct: 284 PSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTD 343

Query: 175 PADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDA--------- 234
           PADAENWLNMLEKCFDVMNCPEERKVRL TFLLQKEAEGWWKSI ARRSDA         
Sbjct: 344 PADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFR 403

Query: 235 -----------------------------LAEYETKYTELSQYADVIVASESDRCRRFEI 294
                                        +AEYE KYTELS+YADVI+ASESDRCRRFE 
Sbjct: 404 GIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRFER 463

Query: 295 GLRFEIRTPVTAIAKWTNFSELVETALRVEQRITEEKSAVKLSRGTSTANGFRSREQQRF 327
           GLRFEIRTPVTAIAKWTNFS+LVETALRVEQ ITEEKSAV+LSRGTSTA+GFR REQ+RF
Sbjct: 464 GLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRF 522

BLAST of MELO3C029662 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.0e-92
Identity = 187/254 (73.62%), Postives = 199/254 (78.35%), Query Frame = 0

Query: 111 TPAESGRDASTLRVRGGAENKQFARTTQEIGRPDRVEPSDLEKAYGIEQLKKLGATVFEG 170
           T   S  ++STL VRGGA N+QFARTTQEIGR DR EPSD EKAYGIE+LKKLGATVFEG
Sbjct: 20  TQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEG 79

Query: 171 STNPADAENWLNMLEKCFDVMNCPEERKVRLTTFLLQKEAEGWWKSISARRSDA------ 230
           ST+PADAENWLNMLEKCFDVMNCPEERKVRL TFLLQKEAEGWWKSI ARRSDA      
Sbjct: 80  STDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQ 139

Query: 231 --------------------------------LAEYETKYTELSQYADVIVASESDRCRR 290
                                           +AEYE KYTELS+YADVI+ASESDRCRR
Sbjct: 140 TFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRR 199

Query: 291 FEIGLRFEIRTPVTAIAKWTNFSELVETALRVEQRITEEKSAVKLSRGTSTANGFRSREQ 327
           FE GLRFEIRTPVTAIAKWTNFS+LVETALRVEQ ITEEKSAV+LSRGTSTA+GFR REQ
Sbjct: 200 FERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQ 259

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0046779.14.7e-10886.48uncharacterized protein E6C27_scaffold216G00650 [Cucumis melo var. makuwa][more]
KAA0042134.16.0e-10363.79DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0035073.11.8e-9964.08uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa][more]
KAA0056684.12.9e-9766.24DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0066849.12.1e-9273.62DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TZW12.3e-10886.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TFC52.9e-10363.79Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
A0A5A7SX028.7e-10064.08CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7UNA31.4e-9766.24Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73... [more]
A0A5A7U2V71.0e-9273.62Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 171..323
NoneNo IPR availablePANTHERPTHR34482:SF4POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATEDcoord: 171..323

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029662.1MELO3C029662.1mRNA