MELO3C029658 (gene) Melon (DHL92) v4

Overview
NameMELO3C029658
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionE3 ubiquitin-protein ligase COP1
Locationchr02: 17514994 .. 17517767 (+)
RNA-Seq ExpressionMELO3C029658
SyntenyMELO3C029658
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTGAGTTCTGTGAAAGTTAATTGCTCTCCCATTTCTCTCTGAACAAATTTTCTCTCTAAGAAAAATTCCCTCATTCCAATTTTAGTTTCCACAAACCATCTCAATCAGAGAATAGGAAGGTTTCCAAGTGGTGGTGCCTAAATTGGTGATTGGTAGATTCAGAGTCGTCAACGAGTGTAAGTTTTCTTATATGTATTTTTTCTTCAAAGCATGTTTAACCATAAAAATTGTTTTTGTAATTTTTTGCCAATGTATTGGTATTTTTAAGGTTTCAATTAAAATTGGGTTTCTGTAATTTGCTGTAAAAGGTTTTCATCCCTTCACAAACTACCTTCAACTAGGAGTTTATTGAAGATAACTTACACTTGGTGATTTCCAGTCACTTTCAACTGGTAGTTCATTGAAGAATTTCTTTTCATCTGAACATCATCGAAGGCAACTTACCTCACCTAACTCAATCAAGTTACACTCAACTTTCCTCCCTTCTCTTTTTAAAGTGAATGTTGCTCTCCCAAAAAAGGTAACTCCTCTTTTTACATGCTGTTTTTTAATTACTATTTTGAGAACATGTCATTCCTTAAGCAACTCCTGAAGATTACTTGCTATATTGAGAAGAAAGAGTTCATACTATCTTTGGATAGTAAAACAAACCAGCTTCGTACATATGTGGTTGACTGAAGTTTGTCAACACAAATCATTTTCTATAGATTATGGATTGTTTTTTATGTAATTTTTTTGTACGTTTATCAAGTACGTAATTTGTAACTGAACTGTGTGATATTTCTTTTATTAGTTTAAGTTGCTTATAATTAGTTTTTCCTTTTATGTTTATTGAATTGTACTCAGGTGGAATAAAATGCTTGGATTCTCTTGTAATTTGTAAAGTAAAGGTTATATGTTTTGTTTTATTGAATTTGATTATGAAATAGATTATATTTAGTATTTCTCGTTATTCTGACCTTCTATTTGGTCTTTGTATAATTTTTGATACTTTAATATAAGCGTCCATTCATACCTATTTATTAGAATTTCTATTCCTCATTTTCAAATTCGTCCATATTAGTTAGCTTGTTCAATTATTTTATGCCATCCAATGATCCAACTTGGGAATTGAAGGTTTTTGCTCCTTGTGTCAAATTTCAAGTTAATCATGTTGGCTGAAATCGTAATTTGTATCTGTAATTTCTGAGCAAACTAGGAAGACACTTGTCAAGCAAAGCATTAGTTCGTACTAGAAGTTGCCAGTGGACTGAGTCTTTATCTTCTGAAACTGATTTAGATGAATGTTTGTTAACTTTTGAAACCAATACCTGTAATCAAATTTTACAAAGTTCATTCTTTGGTTTAATTTGCTGTCAAATGTAATAGTTTAAAAACTAATATCTGAAGGCTTGATTTATTGGTCATGAATTTTATATGGGATTCCTTCCTTTAAAAAGTTTACTTTGTCATGTTTGCAGGTGAAAATCCAGTGCTTAGCTCTAATATCAAAAGTATAAGGTCTGTATGATGGGATGATTTGTTCTTTTTTGTAAATATTTGATTATATGTTTGTTTGGCCTTTAAAATTATTGGACCATTTCAGGAGTGGAGAATTTAAACATATAGATTCTCCAAAACAACATGTTGGTGGAGATCCTCGTGTTTACAGTGCTAGCGTAAGTATCGATTCACGATTCGTATGAACATGTCTTGGATTGCTTTTAAGCCATGTGAGCAGAGGCTAGAATCATATCCTCTAATTATAATAAAACACCAGGAGATGATAATTACATTATACTTAACCATGAATTTGTTTTCATCTGTGTACACTTATCTACGCATTTTTCTCCTACACTATTTTTTCTTTTTATTATCTTTGTTGATCCCCTTCAAGATATAAAAGGAAGTATCAAGTGAACATCCATAGTTGTTGGCATCTTTTAGCTAGTTACAATACATGACTCGTACACTTCCTCTTTGAGAATGCTTTTTAATCTTGTTTTGCTGGCTTCATAGTTGGTATGTAATTTGTATTGTTGTACTTTTCTTGAACCTAACATAATTTTTTGAATTTCTTTTAGATTTATTGTTACAAATAATGGATCGGGACATGATGTTGCTGGCTTGAGGTGAGGATGTATTTAATTCATTCAACGAAAGGTGCTTGTTAAGTAATTTTATTGTGTTATGGAGTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTAGTATCAAGCAGTGATGACTTTAAGGTATTTGACTGAAGCACACACTAACTTGATTTGGTGAAGATCGATTATTGATTTAAAAATAGATTTGTGATTGATGCTCATAAGTGAGGATTAACTAGCAATTCTCTAATTTCTGCATTTCAATTTTTTTCATCTTTTTCAATGGTTAGATTTGTAGCAGAGGATATTTGACTTGTCAACTTTGGCACTTCGAAAATGATATCCTTTGTTGAGTTTTATCTGTAAATTAGGCAATATAATTTTGGATCCATGCTGAAGTTGTTACTACCACATGATTTGTAGAAATTATCCAGACAATTATGTATTACTCAAGTCTGGGTCAAAGGGTTAATAGTTTGTCAGTTGTTGGTGGCTTGTTCTTAAACAAGTTCTTCTCCTGCTTACTAACTTCAAGTTAACATTCGATTCTTTCCATTATGTTTTTTTTATACTATTCTCAGGTACATTGCTCCCTTTCTTTTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGCTGA

mRNA sequence

ATGGTGGTGAGTTCTGTGAAATCACTTTCAACTGGTAGTTCATTGAAGAATTTCTTTTCATCTGAACATCATCGAAGGCAACTTACCTCACCTAACTCAATCAAGTTACACTCAACTTTCCTCCCTTCTCTTTTTAAAGTGAATGTTGCTCTCCCAAAAAAGAACATGTCATTCCTTAAGCAACTCCTGAAGATTACTTGCTATATTGAGAAGAAAGAGTTCATACTATCTTTGGATAGTGAAAATCCAGTGCTTAGCTCTAATATCAAAAGTATAAGGAGTGGAGAATTTAAACATATAGATTCTCCAAAACAACATGTTGGTGGAGATCCTCGTGTTTACAGTGCTAGCTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTAGTATCAAGCAGTGATGACTTTAAGGTACATTGCTCCCTTTCTTTTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGCTGA

Coding sequence (CDS)

ATGGTGGTGAGTTCTGTGAAATCACTTTCAACTGGTAGTTCATTGAAGAATTTCTTTTCATCTGAACATCATCGAAGGCAACTTACCTCACCTAACTCAATCAAGTTACACTCAACTTTCCTCCCTTCTCTTTTTAAAGTGAATGTTGCTCTCCCAAAAAAGAACATGTCATTCCTTAAGCAACTCCTGAAGATTACTTGCTATATTGAGAAGAAAGAGTTCATACTATCTTTGGATAGTGAAAATCCAGTGCTTAGCTCTAATATCAAAAGTATAAGGAGTGGAGAATTTAAACATATAGATTCTCCAAAACAACATGTTGGTGGAGATCCTCGTGTTTACAGTGCTAGCTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTAGTATCAAGCAGTGATGACTTTAAGGTACATTGCTCCCTTTCTTTTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGCTGA

Protein sequence

MVVSSVKSLSTGSSLKNFFSSEHHRRQLTSPNSIKLHSTFLPSLFKVNVALPKKNMSFLKQLLKITCYIEKKEFILSLDSENPVLSSNIKSIRSGEFKHIDSPKQHVGGDPRVYSASYEEHEKRAWSVDFSRSEPSMLVSSSDDFKVHCSLSFLIGQNLVHKTLENC
Homology
[Close]
BLAST of MELO3C029658 vs. NCBI nr
Match: KAE8785726.1 (E3 ubiquitin-protein ligase COP1 [Hordeum vulgare])

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-05
Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKVHCS----------------LSFLI---GQN 168
           YEEHEKRAWSVDFSR+EP MLVS SDD KV  S                L+ L+   GQ+
Sbjct: 43  YEEHEKRAWSVDFSRTEPKMLVSGSDDCKVETSDCIPAQQFCSDSVITDLNLLLCMPGQS 102

[Close]
BLAST of MELO3C029658 vs. NCBI nr
Match: XP_028554358.1 (E3 ubiquitin-protein ligase COP1 [Dendrobium catenatum] >PKU70650.1 E3 ubiquitin-protein ligase COP1 [Dendrobium catenatum])

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDD+KV
Sbjct: 480 YEEHEKRAWSVDFSRTEPSMLVSGSDDYKV 509

[Close]
BLAST of MELO3C029658 vs. NCBI nr
Match: XP_041003036.1 (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase COP1-like [Juglans microcarpa x Juglans regia])

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDD+KV
Sbjct: 471 YEEHEKRAWSVDFSRTEPSMLVSGSDDYKV 500

[Close]
BLAST of MELO3C029658 vs. NCBI nr
Match: XP_018840782.1 (E3 ubiquitin-protein ligase COP1 [Juglans regia] >KAF5480994.1 hypothetical protein F2P56_001690 [Juglans regia])

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDD+KV
Sbjct: 471 YEEHEKRAWSVDFSRTEPSMLVSGSDDYKV 500

[Close]
BLAST of MELO3C029658 vs. NCBI nr
Match: KAF3971871.1 (hypothetical protein CMV_004573 [Castanea mollissima])

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDD+KV
Sbjct: 466 YEEHEKRAWSVDFSRTEPSMLVSGSDDYKV 495

[Close]
BLAST of MELO3C029658 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDD KV
Sbjct: 459 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 488

[Close]
BLAST of MELO3C029658 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR++PSMLVS SDD KV
Sbjct: 456 YEEHEKRAWSVDFSRTDPSMLVSGSDDCKV 485

[Close]
BLAST of MELO3C029658 vs. ExPASy Swiss-Prot
Match: Q8NHY2 (E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.5e-04
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 0 

Query: 115 SASYEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           S  Y+EHEKR WSVDF+  +P +L S SDD KV
Sbjct: 506 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 538

[Close]
BLAST of MELO3C029658 vs. ExPASy Swiss-Prot
Match: Q9R1A8 (E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 5.5e-04
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 0 

Query: 115 SASYEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           S  Y+EHEKR WSVDF+  +P +L S SDD KV
Sbjct: 508 SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV 540

[Close]
BLAST of MELO3C029658 vs. ExPASy Swiss-Prot
Match: Q9SYX2 (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.1e-04
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 116 ASYEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           + Y EH+KRAWSVDFS S+P+  VS SDD  V
Sbjct: 802 SQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSV 833

[Close]
BLAST of MELO3C029658 vs. ExPASy TrEMBL
Match: A0A2P2KYZ1 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.6e-06
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDDFKV
Sbjct: 466 YEEHEKRAWSVDFSRTEPSMLVSGSDDFKV 495

[Close]
BLAST of MELO3C029658 vs. ExPASy TrEMBL
Match: A0A2P2KZ19 (Ubiquitin ligase protein cop1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.6e-06
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDDFKV
Sbjct: 315 YEEHEKRAWSVDFSRTEPSMLVSGSDDFKV 344

[Close]
BLAST of MELO3C029658 vs. ExPASy TrEMBL
Match: A0A2P2KZ01 (Ubiquitin ligase protein cop1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.6e-06
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDDFKV
Sbjct: 466 YEEHEKRAWSVDFSRTEPSMLVSGSDDFKV 495

[Close]
BLAST of MELO3C029658 vs. ExPASy TrEMBL
Match: A0A453PPI5 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.9e-06
Identity = 36/70 (51.43%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV---HCSLS-------FLI----------GQ 168
           YEEHEKRAWSVDFSR+EP MLVS SDD KV    C +S       F+I          GQ
Sbjct: 483 YEEHEKRAWSVDFSRTEPKMLVSGSDDCKVETSECCISALQFYSDFVITDRNLLLCMPGQ 542

[Close]
BLAST of MELO3C029658 vs. ExPASy TrEMBL
Match: A0A6A1WGV3 (E3 ubiquitin-protein ligase COP1 OS=Morella rubra OX=262757 GN=CJ030_MR2G028791 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDD+KV
Sbjct: 455 YEEHEKRAWSVDFSRTEPSMLVSGSDDYKV 484

[Close]
BLAST of MELO3C029658 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 7.6e-09
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 118 YEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           YEEHEKRAWSVDFSR+EPSMLVS SDD KV
Sbjct: 459 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 488

[Close]
BLAST of MELO3C029658 vs. TAIR 10
Match: AT2G46340.1 (SPA (suppressor of phyA-105) protein family )

HSP 1 Score: 45.4 bits (106), Expect = 5.1e-05
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 0 

Query: 116 ASYEEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           + Y EH+KRAWSVDFS S+P+  VS SDD  V
Sbjct: 802 SQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSV 833

[Close]
BLAST of MELO3C029658 vs. TAIR 10
Match: AT4G11110.1 (SPA1-related 2 )

HSP 1 Score: 41.6 bits (96), Expect = 7.3e-04
Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 0 

Query: 120 EHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           EHEKRAWSVDFS + P+ L S SDD  V
Sbjct: 813 EHEKRAWSVDFSEACPTKLASGSDDCSV 840

[Close]
BLAST of MELO3C029658 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 41.2 bits (95), Expect = 9.6e-04
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 0 

Query: 119 EEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           +EHEKR WS+D+S ++P++L S SDD  V
Sbjct: 573 KEHEKRVWSIDYSSADPTLLASGSDDGSV 601

[Close]
BLAST of MELO3C029658 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 )

HSP 1 Score: 41.2 bits (95), Expect = 9.6e-04
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 0 

Query: 119 EEHEKRAWSVDFSRSEPSMLVSSSDDFKV 148
           +EHEKR WS+D+S ++P++L S SDD  V
Sbjct: 573 KEHEKRVWSIDYSSADPTLLASGSDDGSV 601

The following BLAST results are available for this feature:
BLAST of MELO3C029658 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8785726.11.3e-0550.72E3 ubiquitin-protein ligase COP1 [Hordeum vulgare][more]
XP_028554358.12.1e-0590.00E3 ubiquitin-protein ligase COP1 [Dendrobium catenatum] >PKU70650.1 E3 ubiquitin... [more]
XP_041003036.12.1e-0590.00LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase COP1-like [Juglans microcarpa x... [more]
XP_018840782.12.1e-0590.00E3 ubiquitin-protein ligase COP1 [Juglans regia] >KAF5480994.1 hypothetical prot... [more]
KAF3971871.12.1e-0590.00hypothetical protein CMV_004573 [Castanea mollissima][more]
BLAST of MELO3C029658 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P432541.1e-0790.00E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV... [more]
P934712.4e-0786.67E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1[more]
Q8NHY25.5e-0460.61E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1[more]
Q9R1A85.5e-0460.61E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2[more]
Q9SYX27.1e-0462.50Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV... [more]
BLAST of MELO3C029658 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P2KYZ14.6e-0693.33Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A2P2KZ194.6e-0693.33Ubiquitin ligase protein cop1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A2P2KZ014.6e-0693.33Ubiquitin ligase protein cop1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A453PPI57.9e-0651.43Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... [more]
A0A6A1WGV31.0e-0590.00E3 ubiquitin-protein ligase COP1 OS=Morella rubra OX=262757 GN=CJ030_MR2G028791 ... [more]
BLAST of MELO3C029658 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G32950.17.6e-0990.00Transducin/WD40 repeat-like superfamily protein [more]
AT2G46340.15.1e-0562.50SPA (suppressor of phyA-105) protein family [more]
AT4G11110.17.3e-0467.86SPA1-related 2 [more]
AT1G53090.19.6e-0455.17SPA1-related 4 [more]
AT1G53090.29.6e-0455.17SPA1-related 4 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 108..150
e-value: 1.4E-7
score: 32.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029658.1MELO3C029658.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding