MELO3C029568 (gene) Melon (DHL92) v4

Overview
NameMELO3C029568
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr02: 10799302 .. 10806781 (+)
RNA-Seq ExpressionMELO3C029568
SyntenyMELO3C029568
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAATAAACGTCAGGTAAAATTCGCACTATGCTTGATGCTAAAAAACCGTCAAGTACAATCTCCACTATGAAGAGTTAATGGTGCTGAGAATTCATGAAAAATACCCTTAGTTTGAAAAAAAATTATTAAAACTAGCATTCTCAAACTCATGACTATGATCGCTTCTAATACATTGAATCTTTTTATCTTGTTCTCGTTGTAACTGAACACATAATGATCAAAACAACTTGAACCAATCAGATATTTCACGAATATATCATCCTAAGTTGTCGCGCTCCATCTCTACGCCATTCTCTCTATTTTCGGACAGCCGGCCACAAAGACTCCGACGGCGACCCACAACACTTTGACTCCAACCCATTGCAATTCACAGTACTTTGACTCCAACGGCGACCCACGGTAAAATAGGTTTTCAAGGTTTGGATAATTTTGAAATTTACTTCTCTTGCTTCTTGTTTTCTAATACATTTTTTCGACTAATATGTTTTTTGATTATTTAATAATTATTTTTACCCTATTCTTGTGGGATGACTACCTTGCTTTCTTATTGTTTCTTTAGTCTTGTTGCAATTATTTAAAAGATTAGTATGTACTTGGTGTTCTCTATTATGCTTTTAATGATTATTGAATTTTTTTTTACTTTGAAGTATCGAAAACGTTGACATGCGAATATATTATTAAAGTTCAGGAAATAGGCCTAAAGATTCTTTACTGGTTTTGAACTTTGATTTTATTGATTGAATTGAAATTTATTTAAGTTTCAAGGTTCATTGGTATTGACTGCAATATTATGTACCACAGTGCCTAATATGTCCAAAAATGCTTCCTTGTGTCTCTGTGAATGTCGAATTTAATTCAGACTTTTCTCAACTCTCTTATCTCAAATTACCTTCATAATTTATTAAATGAAGTTGCAACTTTTAGGTTGTTTATTTTGTGAAACACCTCTTGAAATTTGTTTTATCTTTAGATTTTTCCATTTTATGTTGAAGTTGAATGAAATGTTGGTGAGAATGATACTTATAGAGATGTGGAAGAAAATTCTTTATGAAATCCAAGTTATGCTGGTCTTCATTAAATTAAAACAAATTGAAGTTTTTCTTTGACAACTTTTTGATGTGGTAACAATGCAGGTTGAAGAAGAAATTGACATTCAGTTAAATCTTGAGGACATGGTTGATCTTACCGGCATCTTTGGCCAATCAACTCGATGATGAGTTTTTTCTTCTCTCACTAGTTCACATTTTAACATATTTCAATGTTTGAAAATTTAGTAGTCGTGACTTGTGCATAGGCTAGTTTTCTTTTTCAGATTTTGAAAGATCCATGATCAATTAATCTGTAAAACGTTTATTAAGAATCAAATTGTGAATGTTTACCACTAGGAATTAATGAATTAATATAGAATTCTTCGTCATTTTTTTCAATTCTTTAGTGGCATAAGGGATGCAACTATTTGATAAGATGATGCTATGTGAACCCATTTTAACTTGACATTGTTGTATTTTGTTTTAGGTTGTGGGATCCACGTTTCTATTTGAAGCCAAGTTCATCCAAGGTCATTGAGTTTCAAGCTTCTTGAATTAATTAAGTTTGTGCTTCTTGAACTAGAATTGTAGTCTTGTGATTTTTTGAATAGCATAGTTTGATTGGTTTTGTAATTTTGTATCTGTTGATTACATTGCTTAGAAGAATGAAATTATTGTTGGTTTACTTATGATAATAAATTATTTGTCATTTTTTTTTTGTTATGTAACTACTGGTTGGAGAGTTTATTTTGTTGATGGATATGTTTTATTGAAACGAATGTACTTAACGCAGGAAATAAAAAATGGAAAATTTTGTATATTTAATGTATCAATAAATGGTATACATGACGTTAAATACATGTCGAGTATATTATCTTACTAAACATGTAAATAATGTCAAGTATACGATCTTACTTGACGTGCAAAAATCGTCAAACACAACATCTTACTTGACATCTAAAAAATGTCAAGTGTGCTAGATTGCTTGACGTTAATACAGTGTCAAGTAAACGTCTACTTGACACTAAAAACCATCAAGTAATGTGACTATACTTAACAATCGATTACTTGACACTTTTAGAAATGTCAAGTATAGGTTTACTTGACATTGTATTAACGTCAAGTAATCCAATTTCTATAGTAGTAAAGTGAATCTAGAGTAGTCGTCAACAACTACCAGCACATATTTTTTTACCTCCAAGACTTTCCACCTACATTGGACCCAATATGTCTAAACGAAGCAATTTTAAGACTCGATTTGTTCTAATATGGTCTCCAGTCCTTTGAGATGATTTGATTTGCTTTCCAACTGGACATTCTAAGCACTGAATATTATTATTTTGTTTTAATGACACTCCATGAACGACTTCTCAGTTTATAGTCTTACAAATTTTAGATATGCTTATATGTCCAAGACGTTTAGGCCATAGCATAGTTTCATTAGATTTAACCAGATTACACTTAAGTTTATTATCCCATGGATAATAATTGTCAGAAATTTGTGTTCTAATCATTACTACATTTTTGCCAGAATCTAGCACTTCATAATTGTCTTTTGAGAATTGAACTCTAAACCCCTGATCGCACAATTGACTAATACTAATAAGATTTGCAAACAACCCTTCAACTAGTGTGATATTACAGAGATTCGGAGTAGCTAGCCAATTAATATGACCTTTAACATTAACTTTTTCCTGTACACCATCACCAAATGCTACTTGTCTAGGTAACTTTCTTTTAAATTAGAAAAAAAGAGAGGGTTTCCTGTCATGTGCCTTGAACACCCATTGTCAAAATACCACCCTTCTGAATTTGTGTTATATATTAAAGTAAAAGCCACATTACAAGCAAGTGATCTCCCTGACTCTTTCACTCTCCAAACCTTTTTAACAATAGTGTTTAAGGGCACATTATGTTTTCTAGACTTCTGATTACTCACCTTGCTGATCCCAAGAAGCATATAGTAGTATGGTCTAATATGCCCAGGTTGATTGCAAAAGTGACATATCCATTTTGACGTTACACTGGACCTCTATTTGAGAGTAATAGCTTTAGCTTCTGTGACTTCAGGAATATGATTTTGATTTGTGCCTTGTGTAGCTTGAACAAACACAATAGATTTTCCTTTCACTGAGGAACTACTTTCTGAGAAACCTATACCTTTTTTGTCATTCTTCAAATTTTCCCTGCTTAAGACATCATTAAGACTATAAGTTTCAAAGGACAATAGTCTCATTGATTTGGTTAAAGCGTCTTAGTCGTTTCGAGCACTTTTCAGTTCCTATTTTAGAGTAACAATGGTAGTCATTAATTTATGATTATCTTCACATAAGTCTAGAATACCTTCTTGTTGCAGTCTTAGTACTTCTTGATCTTCCTTCCATAATGATAATAGTTCTTCGAAATTTGAGGTAGTTACCTTGACTAGTTTTTCACTAGATAAATGTGACTTCTTACTATCTAACTCATCTTTTTCTTCAGAACCAATGACTAGTTTACCTCATTAGATATTTCTTGCTGCTCTACCAAAATCTTCATCGTCACTACCAGAAAGGGTATCTTCATCAGATAATGTAATTGCAAGCCCCTTTTTCTTTCTTTTTAAAGAAGTAGCACACTCTGCTTGATAGTTTCTTGAATCCTTCACACTCATGACATCTAACACTTTTATCAATTTGACTAGTATTTCAATAACTATCCTTCCGTCGAGACCCAACAATAAAATTTGGTGAACATGTACCAAAAGTATTCATTGATGCAGAATCTCTATTTGATTGAGTTTCGAATGTTTTCGGTTTTTTGTAAAACTTACTTTTTGATTTAGAGAATCCTTTCGACAGAAGAGCAACTGCTTTAGTCAGATTATCATCCTAGGGTACCTTTGAGGTAAGCTTTGTTGTTTCCTCACTAACTCCCTGAAAAGCAAGATTATTTTTCTTCTTCGAACTATTATCCTTTACTGACAACTTGAATGTTCTCAAAGATCCAAACAACTCATCCAGTCTCATGACTATAATATTATTAGCTTTCTCAATAGCTGTGACTTTCATGTTAAGTCGAGGAAGAAGAGACCTTAATACTTTTCTCACCAACTTCGTATCAGTAAGTTTTTCACCTAAGGTGAATGACTCGTTTGCCAAATCCAGAACATGAACATTAAACTCTGCTAAGGTCTCATCTTCTACCATCTTAAGTGCCTCAAATTTTAAAGATAGAATCTGAAGTCTGGATATCTTAACATTATAGGTTCCTTCATAAGAAGTTTCAAGAATATTTCACACCTCTTTTGTAGATGAACATGTGTTAATCAATTTGAAGACATTCTGATCAACACCATTGAAAATTGAATTTAAAGCTCTTGAATTTACAAGCACATCTTTATCTTCTTCTTTGGACCAAGTTATCTCGGGTTTAAGTGTCTCTTTTCCAGCAGCATCTTTAGTGGAAAGGTGTTCTCAGAAAGTAATCACTGCTTTCCAATACTTATTGTCAATAGATTTTATGAGTGCAATCATCCAAGCTTTTCAGTAGGCATATTTGCTCTATCTAGAACACGTGGTCTTGTTGTTGAGCATCCTTTAGAAAGAAACTCCATTGAATGAAAAAAAAAAAAACCTTTTTATGATACCAATTGATACAATGAGAACATCAACAACAGTAAGAGGATGAGCCTTTAGTTAGTTAACAATAGGAACAAAAATATGAGCATATAAGGACAGACAATAAGAACATAGACTTTGGTAACCCAGTTCAATGATACTGCATCTATGTCTATATATAACGACCCAACTCTTTATACTAAGTTGGGGTCGTTACTAAAAAGAAACAATGACAAGAGACACTTTTTTGAAAGAGGAAAACTAAATTTTCATTAAAAACAGAATACTGAAACACTGAAACATAGACACGGAAGCCAAACTGAGTCCCCATACGGCATGTCACGGATCCTTCTCTGTCGCTCGCCAGCTTTCCTCTACCTTTACCGTCGCCTGAAATATTAAACATAGAAAGAGTGAGTATAAACAAATACTCAGTAAGGGACCTACTACTAGTCCCGCTAAGTGTCTGTTAACTTCCCATTAGAGTCCTGTAAAGAAGTACCCCTGAACTGGCACGTTCCCGAACACGTGCAACATGCGCTCCCGTAGTTTCGGTGTCCCGGGGGAGCGCATGTTGCACGTTTTCGGGAACGTGCCAGTTCAGGGGTACTTCTTTACAGGACTCTAATGGGAAGTTAACAGACACCTAGCGGGACTAGTAGTAGGTCCCTTACTGAGTATTTGTTTATACTCACTCTTTCTGTGTTTAATATTTCAGGCGACGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTTCGCGTCTATGTTTCAGTGTTTCAGTATTCTGTTTTTAATGAAAATTTAGTTTCCCTCTTTCAAAAAAGTGTCTCTTGTCATTGTTTCTTTTTAGTAACGACCTCAGCTTAGTATAAAAAGTTGGGTCGTTACAGTTGAGAGATTCTCCTAGTAGACCTTCGAATTGAATTTAAGAGACCGCGTGTAATTATGATTATGCATTGATGGTAGCTAAAATGCATAATTTGATATTGTGTTGATAATGATTGTCATTATACTGAGATTATGTTGATGACTGATGTCATGTTATGACTAGAAGTATGTTGATGATGATGATTGAGATTATTATGTTGATGATTGATGATGATGACTGATGTTATGATAATGACTGGTAGATTGATATTGATGATTGTTGATGAATGATATATTAATCACATGATTAAGGACGTTAAAATTAATATTCATGTCATGTTATGATGTTATGTTGTGCTACATGCTATGGATAGGGTGTTCTATTAACTTTGTCTATTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTTAGGACTGCGTAGTCCGACGGGACCGCCAGTCTAGCATGGATATAGATATGATTCGAGTGATTCGACGAGATCTCGCAGCCCGATTATCTTAGTGTTTCCTTCAGGTTCGCTACAGACCAGTATGTCCTAGGTGCTCCCTCGGGACGCCGAAGACCAGATTCTGTTCCTACGGGAGCGCATGTTGCACGTGTTTGGGAACGTGCCAGTTATTGGGTACCTTTTTCAGGACTCTAATGGGAAGTTAACAGACACCTAGCGGGACTAGTAGTAGGTCCCTTACTAAGTATATGTTTATACTCACTCTTTCTATGTTTAATATTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAGAGAAGGGACCGTGACATGCCATATGGCGACTCAGTTTTGCTTCCGCGTCTATGTATCAGTATTTTAGCATTCAGTTTTTAACGAAAATGTAGTTTCCCTCGTTTCAAGAAAGTGTCTATCGTTATTTTTTCTTTTTAGTAATGACCTCAGCTTAGTATAAAGAGTTGGGTCGTTACACTATAAGGTCTTTGACCTAATATGAGAGATTTTATTATTTGAATAATAATTTATAAGTACATTCTTATGATATCAATTGTAGTGTTTCTACATTCACATCTTCACTCTATTCTATCAGTGATAAGTTTTTGCTAAATTAAACCTATCACTATCATGATACAAAGATCATCAAAATAAAATCTCCCCCTTAATCATTTATCTTAATCAATAAACTGATTAAGGATTTTTTGGTTGAAATCTCCTCCTTAATGGTACATTCCATCAAGCATCTTGATGTCTTTGTTGAACTTGTTTCGCAAAACAAAGGACATAAGATCTTACTATGGTAGATCACCATATACATTCTTTAATGAATCATCACAAATAAATATCAAGCAAGAATCATGTCTTACTCGTAGAACATACTTATTTTCTACACAAGTATTTTCGAACAGAAAAATCTTCTTCGGTTTAGCTCATGTACCCACCTCCTTAAAAGTCTCATATATATATATATATAGGCTTGAGAATCTTTGTTTAACCCGAAGATAAAGGCAATATAGAATATACCTATATTACTCTATAAGATCTCCATGATACTAGGAATAATATCTCACAGAAGGTATTTAAATAAATGAATATTTAATAATATCTTCAACTGCTGACACCTTATAGATAAAAAAAATCTTCTAAACAAATATCTTTATAAATTTGAACCAAACTCACAATAAGTCTAACATATTCTACAAAAGGTACATCAACAGAGAGGAGCATTATGCTGAGGTCAAGGGAAATAGGGTAGACTTTGGTCTTAAAGCCCTCAATGCAATATGTGGTTAGGAAATAATGAGATTAGTCTTGTGATATTCAAGAACCCGAAGGATCGGGATTTACAAGAGGCCTTAGTGAAAGCACTTGGCCTAGGACAAGGTGGGACCAAACACCAATCAGGAAGTATCAACTCTTCCCATATAATCTAA

mRNA sequence

ATGCAGAATAAACGTCAGCCGGCCACAAAGACTCCGACGGCGACCCACAACACTTTGACTCCAACCCATTGCAATTCACAGTACTTTGACTCCAACGGCGACCCACGTATCGAAAACGTTGTGGGATCCACGTTTCTATTTGAAGCCAAGTTCATCCAAGGCGACGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTTCGCGTCTATGTTTCAGTGTTTCAGTTCGCTACAGACCAGTATGTCCTAGGTGCTCCCTCGGGACGCCGAAGACCAGATTCTGTTCCTACGGGAGCGCATGTTGCACGTGTTTGGGAACGTGCCAGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAGAGAAGGGACCGTGACATGCCATATGGCGACTCAGTTTTGCTTCCGCGTCTATAACCCGAAGGATCGGGATTTACAAGAGGCCTTAGTGAAAGCACTTGGCCTAGGACAAGGTGGGACCAAACACCAATCAGGAAGTATCAACTCTTCCCATATAATCTAA

Coding sequence (CDS)

ATGCAGAATAAACGTCAGCCGGCCACAAAGACTCCGACGGCGACCCACAACACTTTGACTCCAACCCATTGCAATTCACAGTACTTTGACTCCAACGGCGACCCACGTATCGAAAACGTTGTGGGATCCACGTTTCTATTTGAAGCCAAGTTCATCCAAGGCGACGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAAAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTTCGCGTCTATGTTTCAGTGTTTCAGTTCGCTACAGACCAGTATGTCCTAGGTGCTCCCTCGGGACGCCGAAGACCAGATTCTGTTCCTACGGGAGCGCATGTTGCACGTGTTTGGGAACGTGCCAGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAGAGAAGGGACCGTGACATGCCATATGGCGACTCAGTTTTGCTTCCGCGTCTATAACCCGAAGGATCGGGATTTACAAGAGGCCTTAGTGAAAGCACTTGGCCTAGGACAAGGTGGGACCAAACACCAATCAGGAAGTATCAACTCTTCCCATATAATCTAA

Protein sequence

MQNKRQPATKTPTATHNTLTPTHCNSQYFDSNGDPRIENVVGSTFLFEAKFIQGDGKGRGKLASDKEGSVTCHMGTQFCFRVYVSVFQFATDQYVLGAPSGRRRPDSVPTGAHVARVWERASEGKGRGKLASDREGTVTCHMATQFCFRVYNPKDRDLQEALVKALGLGQGGTKHQSGSINSSHII
Homology
[Close]
BLAST of MELO3C029568 vs. NCBI nr
Match: KAA0058412.1 (hypothetical protein E6C27_scaffold409G001240 [Cucumis melo var. makuwa])

HSP 1 Score: 125.2 bits (313), Expect = 6.0e-25
Identity = 59/63 (93.65%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 89  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERASEGKGRGKLASDREGTVTCHMATQFCF 148
           FATDQYVLGAPSGRRRPDSVPTG HVARV ERASEGKGRGKLASDREG VTCHM TQFCF
Sbjct: 15  FATDQYVLGAPSGRRRPDSVPTGVHVARVRERASEGKGRGKLASDREGFVTCHMGTQFCF 74

Query: 149 RVY 152
           RVY
Sbjct: 75  RVY 77

[Close]
BLAST of MELO3C029568 vs. NCBI nr
Match: KAA0051492.1 (uncharacterized protein E6C27_scaffold174G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-23
Identity = 70/143 (48.95%), Postives = 79/143 (55.24%), Query Frame = 0 

Query: 55  DGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV-------------FQFA----------- 114
           +GKGRGKLASD+EGSVTCHMGTQFCFRVY+S+             F+F            
Sbjct: 4   EGKGRGKLASDREGSVTCHMGTQFCFRVYLSIKSWVVTVGIRASAFRFCRLTYDGVLLTL 63

Query: 115 -------------------TDQYVLGAPSGRRRPDSVPTGAHVAR---VWERASEGKGRG 152
                                Q+VLGA SG RRPD    G+         +R  EGKGRG
Sbjct: 64  SIRVVPAWVSFGITTYLGLRHQHVLGALSGPRRPDFRSYGSACCTCLGTCQRLGEGKGRG 123

[Close]
BLAST of MELO3C029568 vs. NCBI nr
Match: KAA0043073.1 (hypothetical protein E6C27_scaffold158G00090 [Cucumis melo var. makuwa] >TYK30808.1 hypothetical protein E5676_scaffold267G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 117.9 bits (294), Expect = 9.6e-23
Identity = 57/75 (76.00%), Postives = 61/75 (81.33%), Query Frame = 0 

Query: 88  QFATDQYVLGAPSGRRRPDSVPTGAHVARVWERAS-----------EGKGRGKLASDREG 147
           +FATDQYVLGAPSGRRRPDSVPTGAHVA VWERAS            GKGRGKLAS+REG
Sbjct: 45  EFATDQYVLGAPSGRRRPDSVPTGAHVASVWERASYWVPFQDSNGKRGKGRGKLASNREG 104

Query: 148 TVTCHMATQFCFRVY 152
           +VTCH+ TQFCFRVY
Sbjct: 105 SVTCHVGTQFCFRVY 119

[Close]
BLAST of MELO3C029568 vs. NCBI nr
Match: KAA0038060.1 (hypothetical protein E6C27_scaffold36G002660 [Cucumis melo var. makuwa] >TYK20543.1 hypothetical protein E5676_scaffold237G001300 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-20
Identity = 56/75 (74.67%), Postives = 58/75 (77.33%), Query Frame = 0 

Query: 89  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREG 148
           FATDQY LGAPSGRRRPD VPTGAHVARV ERA            SEGK RGKLASD+EG
Sbjct: 25  FATDQYDLGAPSGRRRPDFVPTGAHVARVRERASSVVPLFRTLMGSEGKSRGKLASDKEG 84

Query: 149 TVTCHMATQFCFRVY 152
           +VTCHM TQFCFRVY
Sbjct: 85  SVTCHMGTQFCFRVY 99

[Close]
BLAST of MELO3C029568 vs. NCBI nr
Match: KAA0038061.1 (uncharacterized protein E6C27_scaffold36G002670 [Cucumis melo var. makuwa] >TYK20542.1 uncharacterized protein E5676_scaffold237G001290 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-20
Identity = 54/72 (75.00%), Postives = 57/72 (79.17%), Query Frame = 0 

Query: 92  DQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVT 151
           DQYVLGAPSGRRRPD VPTGAHVARV ERA            SEGKGRGKLASD+EG+VT
Sbjct: 19  DQYVLGAPSGRRRPDFVPTGAHVARVRERASSWGPLFRTLMGSEGKGRGKLASDKEGSVT 78

[Close]
BLAST of MELO3C029568 vs. ExPASy TrEMBL
Match: A0A5A7URB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001240 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.9e-25
Identity = 59/63 (93.65%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 89  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERASEGKGRGKLASDREGTVTCHMATQFCF 148
           FATDQYVLGAPSGRRRPDSVPTG HVARV ERASEGKGRGKLASDREG VTCHM TQFCF
Sbjct: 15  FATDQYVLGAPSGRRRPDSVPTGVHVARVRERASEGKGRGKLASDREGFVTCHMGTQFCF 74

Query: 149 RVY 152
           RVY
Sbjct: 75  RVY 77

[Close]
BLAST of MELO3C029568 vs. ExPASy TrEMBL
Match: A0A5A7U6W1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00110 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.5e-24
Identity = 70/143 (48.95%), Postives = 79/143 (55.24%), Query Frame = 0 

Query: 55  DGKGRGKLASDKEGSVTCHMGTQFCFRVYVSV-------------FQFA----------- 114
           +GKGRGKLASD+EGSVTCHMGTQFCFRVY+S+             F+F            
Sbjct: 4   EGKGRGKLASDREGSVTCHMGTQFCFRVYLSIKSWVVTVGIRASAFRFCRLTYDGVLLTL 63

Query: 115 -------------------TDQYVLGAPSGRRRPDSVPTGAHVAR---VWERASEGKGRG 152
                                Q+VLGA SG RRPD    G+         +R  EGKGRG
Sbjct: 64  SIRVVPAWVSFGITTYLGLRHQHVLGALSGPRRPDFRSYGSACCTCLGTCQRLGEGKGRG 123

[Close]
BLAST of MELO3C029568 vs. ExPASy TrEMBL
Match: A0A5A7TI99 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold267G00360 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.7e-23
Identity = 57/75 (76.00%), Postives = 61/75 (81.33%), Query Frame = 0 

Query: 88  QFATDQYVLGAPSGRRRPDSVPTGAHVARVWERAS-----------EGKGRGKLASDREG 147
           +FATDQYVLGAPSGRRRPDSVPTGAHVA VWERAS            GKGRGKLAS+REG
Sbjct: 45  EFATDQYVLGAPSGRRRPDSVPTGAHVASVWERASYWVPFQDSNGKRGKGRGKLASNREG 104

Query: 148 TVTCHMATQFCFRVY 152
           +VTCH+ TQFCFRVY
Sbjct: 105 SVTCHVGTQFCFRVY 119

[Close]
BLAST of MELO3C029568 vs. ExPASy TrEMBL
Match: A0A5A7T3Y4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001300 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 7.4e-21
Identity = 56/75 (74.67%), Postives = 58/75 (77.33%), Query Frame = 0 

Query: 89  FATDQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREG 148
           FATDQY LGAPSGRRRPD VPTGAHVARV ERA            SEGK RGKLASD+EG
Sbjct: 25  FATDQYDLGAPSGRRRPDFVPTGAHVARVRERASSVVPLFRTLMGSEGKSRGKLASDKEG 84

Query: 149 TVTCHMATQFCFRVY 152
           +VTCHM TQFCFRVY
Sbjct: 85  SVTCHMGTQFCFRVY 99

[Close]
BLAST of MELO3C029568 vs. ExPASy TrEMBL
Match: A0A5A7T8U3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001290 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-20
Identity = 54/72 (75.00%), Postives = 57/72 (79.17%), Query Frame = 0 

Query: 92  DQYVLGAPSGRRRPDSVPTGAHVARVWERA------------SEGKGRGKLASDREGTVT 151
           DQYVLGAPSGRRRPD VPTGAHVARV ERA            SEGKGRGKLASD+EG+VT
Sbjct: 19  DQYVLGAPSGRRRPDFVPTGAHVARVRERASSWGPLFRTLMGSEGKGRGKLASDKEGSVT 78

The following BLAST results are available for this feature:
BLAST of MELO3C029568 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058412.16.0e-2593.65hypothetical protein E6C27_scaffold409G001240 [Cucumis melo var. makuwa][more]
KAA0051492.11.1e-2348.95uncharacterized protein E6C27_scaffold174G00110 [Cucumis melo var. makuwa][more]
KAA0043073.19.6e-2376.00hypothetical protein E6C27_scaffold158G00090 [Cucumis melo var. makuwa] >TYK3080... [more]
KAA0038060.11.5e-2074.67hypothetical protein E6C27_scaffold36G002660 [Cucumis melo var. makuwa] >TYK2054... [more]
KAA0038061.15.8e-2075.00uncharacterized protein E6C27_scaffold36G002670 [Cucumis melo var. makuwa] >TYK2... [more]
BLAST of MELO3C029568 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029568 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7URB22.9e-2593.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U6W15.5e-2448.95Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TI994.7e-2376.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T3Y47.4e-2174.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T8U32.8e-2075.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C029568 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029568.1MELO3C029568.1mRNA