MELO3C029564.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C029564.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr02: 8449971 .. 8453784 (+)
RNA-Seq Expression	MELO3C029564.jh1
Synteny	MELO3C029564.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGGAATGGATTGTATTTTGATGCAACTTTGTGCCCTAAAGTTTTTTTTAAAAATCGTTTTTAATGTTATTCTTTCTGTTCGACATTTGTAACTAATTCCTAAAACAAACTCTTCAATAGCCTCTGAAACAGTATTATAGGATTTCTTAAGCCTTAACGATTGTAACGCCCCAACAATTTAGACTCTTGTCATTTTATTATCTTAAGCGTGGTTACTGAAATTTTGAAGTTACTTGAGAAGACTTGACTAATTATGTTTTGATTTTGTGATTTACTAAGTTTTGAGGATTATATTTATTTTATTTGGAGGATAAAATATCGGTAGAATTATTGTGGTAAATAAAGATATTTGGGTTGAGGAGAGAGAGAATTGATTTTTGTTAAAGATAATGGTGATATATTATTTGGAAAAAGAAAAAGAAAGAGAAGGGATTGATGTGATTGGTTGAAATTGAGTTTTTAAAAGGGAGATTTTGATGGGTTTAATTGAAGAAAGAGAGTATGAGTTTTTTGGGGAAAAGAAAAGATAATAATAATGATAAAGAATTATTATTATTGTGGCATTAAATACATGCACTATTCATCTTTCTCTTCAACCAAACCCTAAAGAGGAACCCTAGCAAGATGCCGCCGCCGCCCTCCGCCAATCATCGCCGTCAAGCATCCGTCACAGATCAGCTCGAGCCGGTAGCCGAGCTGATCGACACCCATCCGAGCTCCAACCATCACGTACGGATCTCAGCCGCACCTCCAAGCCGATCATGTGGAGCCCCGTCGGTCAGTCATCCATCCCCGCGCCAGCCGTCGCGTCTGGGTTGAAGTCTACGAAGTCGTGCAGCCCAGCCCATCGTCGCAGCTTCCATCGCACAACCGAGCCGCGTCGCCACTCGTCCCGAGTGAGTCGAACGCCACCCGCGACGCAGCCGACCCGAACAGCCGCATGAAGACCAATCCGCTCCGCATCGTCGCCGGTCGAACGCATCCAGCCGCGTCGCCACCGACCCGAGTGTCGAGCCACCCCGCGCCCGCGTGCACCCGCAAGCCGTGTCACGTACACCTGCAAGCCACGCTTGTGCGCACACGCGTCCGCGCCCTTCTTCACGAGCTGATTCCCAGTCGAGCCGCGTCTCCCTTCTACCTTCAAGCCGAGTCGATCCCTGCTCTTCCAGCCGAGTCGCCAAACCCCTTCTTGAACCACCTAGCCTTTTTCGGTCCTTTGCACCTAGTTTGGTAAGTCAAATGAGTTTTTAGCATACCTAGCCAAGACTTGAATTTTAACCTAAATAATTTAATTTAGTTCAAATTAAATTATTTCTCTTAAGAAACATCTTGGACCAATTGACTTTGGAGCGTTGGATTTCTTCAGTAAGGGCTTAAGCGTTGCAACCTCGACCTAGGGTAAGTCATCTCAACTACATTTTTGGGTCTTAGGTCGTTTGGTGAATTAATTATGAAAATTGACGTTATTAAACATTTAGGACCTCGCTGCTTGGAAAGCGCATTTTCTTGCTGTTAGAACTCGTTGAGCAATTCTCCAGGTAAGAGATTTCTACTGCTAGCTCTACGACTAGAATCATGAGACCGCATGCATTCTTAGTTATGCACTTGAGGACTAGACTGCATAACAATATGTTAATTAATGAGGGCATGATATGACTGCTGATGTGATTTGTTATGATGACATGGTATAATGTGTTGACGGCTGGTTATGGCTTTATGTTTGGATATTGTGATGAGATGTGATATGATGATTAGACTGATATGATTACATGATGATGTTATGTATATGTATGCTATGGTTAGGGTACCTGTTAGCTTAGCTTATTAGAGTCGTACCTGCATCGGTGTCCTTCGGGATCACCACCTATTTAGGACTGCGTAGTCCGACGGGACCGCCAGTCTGGCATGGATATAGATATGATTCGAGTGATTCAACGGGATCCTCGCAGCCCGATTGTCTTAGTGTTTCTTCCGGGTTCGGTACAGATTAGTATGTGCTAGGTGCTCCCCCGGGACATTGAAGACCAGATTCCGTTCCTATGAGAGCGCATGTTGCACGTGTTCGAGAACGTACCAGTTTTTGGGTACCATTTTCAGGACTCTAATAGGAAGTTAACAGGCACCTAGTGGGACTAGTAGTGGATCCCTTACTGAGTATTTTATATTCACTCTTTTCATGTCACATTTTCAGATAGAGGCAGGGATAAAGACAAGGGCAAGCTGGCGGGCGACCAGAAGTGACCGTGGCGAGCCAAAGGAATTTCTGCTTCCACTTTACACCCCGTTTAAACTTTTAGTACTTGAGTTTTTATTTTTCTTTATTTACTATTTCGTTTCTTTAAAAGTAGATAGGGCCCGAGTAGGATTTTAATATTTGTTTACATTTCGCACATTACCCTGATTTGGTTTTTAAATAAATAAAAGTCTGAGGTCTTATTCATTTTAGCCAAACTTTATGACTTTAATTATGTTATTTACATTTAGTAATGACTTCGACTCAGTATAAGGAGTTGGGTCGTTACAACAATGTTTTATTGAATTGATGTATTTGGTCTAGTCGAAACATTTTACTAAGAAAAACCCAACGAGATGATTTCGAGTTTCTATGTTCATCCATTGTTTTTCCCCATTTTCTTTATTTGGTTTAACAAATTCTCATAGCAAGGCTTAACAATGGGCATGTGGTTATGGATTCAATTGTACAATCTGTAAAGATGGAATGCTATATCATTTATATTAACATTAAAGTTCTGTAAACCCATGTGGCAAGGTACCTTTAGTAGATGAAAGTTAGGGTTGTTCTTGGTTATTGTCTTTTTAATGGTATGCTTATTTTTAACAATTCTCCCCATCTCACTCCTCTTTAACATTTATAGTTCATTTAATGTGTTGTGAAATCATCAGATAGATCTTTTAGATAGATCAACCATGTCATGCCCTGCTCTAAATGTCACTCCATGCGACCACATGATGGCATGCCGCCTTGACTTCCATTACGTATCTCTCGGCGAGATGACGTGTTGAACACCTAGTAAGTGGATAAACTCTTTTTCTTGTCTCTTCAAAAAGCTCTTCCATTGAGCCTGAGACTTTCACAACTTTTACAGTGGAAAACAACTCCTTAGCTTAGCTTTGTCACCTAACTCTTATTACTTAATCCAACCACTTGTATGCAACAAGCACAAAGATAAATACAACGTAAAATAATTTACAACTTTTTGAACTTTACTCCGTCGCCTCATACTTTTACATCACATTACTTAACTTTAAATCCTAGACGACAAACTCAAAGAGATAACAATAAATTAGCGAAATAACTTAACTTCTTCTCTTTATTAACTTAACACTTATAGAGTTCATATATTACAAATTACAACCCTTAAACTTTACTTTGCATAAAATAAAACCAAATCTGATCTTCTCACGTTCTTCTTCTTCCCACCTAAGTGATGTTCTTCGCACCAAGGTGTTTTGCAGTATAAGACTCATGTCTCAACCCTTTTTCCTTTATGTCATCTTCAATCCAACTCAAGGGCATTCTTTAGAGCTTTCTTTTCTTTCTTCGCTGCTAAATGCTGCTCTTTGTGGCTTGTACTTAGAGGTATAAAAGTGTAACTTCGCCTTTCACATTAGTCGCCTAACCACCTCTCTTAGTAAACCAAGTTTAGGGCTATCATTTACCTGACTTAGCTCTTCGGCTCTCTGGCTCATCGGGTTTAGCCTCACCAACCTAGATATTGCACTCGCCTTCCTTTCGAGTCAGGCCATTTATACTAAGGAGCGATGCACTTACCAACTGGCTCCTTAG

mRNA sequence

ATGGAAGTGGAATGGATTAGGAACCCTAGCAAGATGCCGCCGCCGCCCTCCGCCAATCATCGCCGTCAAGCATCCGTCACAGATCAGCTCGAGCCGGTAGCCGAGCTGATCGACACCCATCCGAGCTCCAACCATCACGTACGGATCTCAGCCGCACCTCCAAGCCGATCATGTGGAGCCCCGTCGCCCAGCCCATCGTCGCAGCTTCCATCGCACAACCGAGCCGCGTCGCCACTCGTCCCGAGTGAGTCGAACGCCACCCGCGACGCAGCCGACCCGAACAGCCGCATGAAGACCAATCCGCTCCGCATCGTCGCCGGTCGAACGCATCCAGCCGCGTCGCCACCGACCCGAGTGTCGAGCCACCCCGCGCCCGCGTGCACCCGCAAGCCGTGTCACGTACACCTGCAAGCCACGCTTGTGCGCACACGCGTCCGCGCCCTTCTTCACGAGCTGATTCCCAGTCGAGCCGCGTCTCCCTTCTACCTTCAAGCCGAGTCGATCCCTGCTCTTCCAGCCGAGTCGCCAAACCCCTTCTTGAACCACCTAGCCTTTTTCGAAACATCTTGGACCAATTGACTTTGGAGCGTTGGATTTCTTCAGTAAGGGCTTAAGCGTTGCAACCTCGACCTAGGCTTATTAGAGTCGTACCTGCATCGGTGTCCTTCGGGATCACCACCTATTTAGGACTGCGTAGTCCGACGGGACCGCCAGTCTGGCATGGATATAGATATGATTCGAGTGATTCAACGGGATCCTCGCAGCCCGATTGTCTTAGTGTTTCTTCCGGGTTCGGTACAGATTAGTATATAGAGGCAGGGATAAAGACAAGGGCAAGCTGGCGGGCGACCAGAAGTGACCGTGGCGAGCCAAAGGAATTTCTGCTTCCACTTTACACCCCGTTTAAACTTTTAATAGATCTTTTAGATAGATCAACCATGTCATGCCCTGCTCTAAATGTCACTCCATGCGACCACATGATGGCATGCCGCCTTGACTTCCATTACGTATCTCTCGGCGAGATGACCTCTTCGGCTCTCTGGCTCATCGGGTTTAGCCTCACCAACCTAGATATTGCACTCGCCTTCCTTTCGAGTCAGGCCATTTATACTAAGGAGCGATGCACTTACCAACTGGCTCCTTAG

Coding sequence (CDS)

ATGGAAGTGGAATGGATTAGGAACCCTAGCAAGATGCCGCCGCCGCCCTCCGCCAATCATCGCCGTCAAGCATCCGTCACAGATCAGCTCGAGCCGGTAGCCGAGCTGATCGACACCCATCCGAGCTCCAACCATCACGTACGGATCTCAGCCGCACCTCCAAGCCGATCATGTGGAGCCCCGTCGCCCAGCCCATCGTCGCAGCTTCCATCGCACAACCGAGCCGCGTCGCCACTCGTCCCGAGTGAGTCGAACGCCACCCGCGACGCAGCCGACCCGAACAGCCGCATGAAGACCAATCCGCTCCGCATCGTCGCCGGTCGAACGCATCCAGCCGCGTCGCCACCGACCCGAGTGTCGAGCCACCCCGCGCCCGCGTGCACCCGCAAGCCGTGTCACGTACACCTGCAAGCCACGCTTGTGCGCACACGCGTCCGCGCCCTTCTTCACGAGCTGATTCCCAGTCGAGCCGCGTCTCCCTTCTACCTTCAAGCCGAGTCGATCCCTGCTCTTCCAGCCGAGTCGCCAAACCCCTTCTTGAACCACCTAGCCTTTTTCGAAACATCTTGGACCAATTGA

Protein sequence

MEVEWIRNPSKMPPPPSANHRRQASVTDQLEPVAELIDTHPSSNHHVRISAAPPSRSCGAPSPSPSSQLPSHNRAASPLVPSESNATRDAADPNSRMKTNPLRIVAGRTHPAASPPTRVSSHPAPACTRKPCHVHLQATLVRTRVRALLHELIPSRAASPFYLQAESIPALPAESPNPFLNHLAFFETSWTN

Homology

[Close]

BLAST of MELO3C029564.jh1 vs. NCBI nr
Match: KAA0059970.1 (hypothetical protein E6C27_scaffold340G00100 [Cucumis melo var. makuwa] >TYJ97226.1 hypothetical protein E5676_scaffold194G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.58e-12
Identity = 70/184 (38.04%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 2   EVEWIRNPSKMPPPPSANH------RRQASVTDQLEPVAELIDTHPSSNHHVRISAAPPS 61
           E E   +P  +PPPP  +        R AS     +P+  ++   P+  HH  +  +P S
Sbjct: 9   EGEKNPSPKPLPPPPLPSPPVVVIGSRPASP----QPIPYVVRRAPAKRHHREVRRSPLS 68

Query: 62  RSCGAPSPSPSSQLPSHNRAASPLVPSESNATRDAADPNSRMKTNPLRIVAGRTHPAASP 121
                  PSP            P+VPSES A RD        +  P +    R+ P   P
Sbjct: 69  -------PSP----------IQPIVPSESTAIRD--------RNRPKQPREDRSAPHRHP 128

Query: 122 PTRVSSHPAPACTRKPCHVHLQATLVRTRVRALLHELIPSRAASPFYLQAESIPALPAES 179
            TR SS  APAC  KP  VH QA   RTR  A LHE IPS+A +   LQAE I A PAE 
Sbjct: 129 -TRASSRFAPAC--KPRRVHPQAAPARTRTSAFLHEPIPSQADA--CLQAEPILAFPAEP 158

[Close]

BLAST of MELO3C029564.jh1 vs. NCBI nr
Match: KAA0049747.1 (hypothetical protein E6C27_scaffold76G00960 [Cucumis melo var. makuwa] >TYK12131.1 hypothetical protein E5676_scaffold106G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 7.97e-10
Identity = 46/96 (47.92%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 91  ADPNSRMKTNPLRIVAGRTHPAASPPTRVSS-------HPAPACTRKPCHVHLQATLVRT 150
           ADPN+R+KT+PL I      PAAS P   +        HP  A T +   VH QA  +R 
Sbjct: 82  ADPNNRVKTDPLCIATRPERPAASRPLHTAPAYKLRRVHPQAASTCESRRVHPQAAPLRI 141

Query: 151 RVRALLHELIPSRAASPFYLQAESIPALPAESPNPF 179
           R  A L E IPSRA     LQ E IPA PAES NPF
Sbjct: 142 RASAFLREPIPSRAD--VCLQTEPIPAFPAESSNPF 175

[Close]

BLAST of MELO3C029564.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UXT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00140 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.65e-13
Identity = 70/184 (38.04%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 2   EVEWIRNPSKMPPPPSANH------RRQASVTDQLEPVAELIDTHPSSNHHVRISAAPPS 61
           E E   +P  +PPPP  +        R AS     +P+  ++   P+  HH  +  +P S
Sbjct: 9   EGEKNPSPKPLPPPPLPSPPVVVIGSRPASP----QPIPYVVRRAPAKRHHREVRRSPLS 68

Query: 62  RSCGAPSPSPSSQLPSHNRAASPLVPSESNATRDAADPNSRMKTNPLRIVAGRTHPAASP 121
                  PSP            P+VPSES A RD        +  P +    R+ P   P
Sbjct: 69  -------PSP----------IQPIVPSESTAIRD--------RNRPKQPREDRSAPHRHP 128

Query: 122 PTRVSSHPAPACTRKPCHVHLQATLVRTRVRALLHELIPSRAASPFYLQAESIPALPAES 179
            TR SS  APAC  KP  VH QA   RTR  A LHE IPS+A +   LQAE I A PAE 
Sbjct: 129 -TRASSRFAPAC--KPRRVHPQAAPARTRTSAFLHEPIPSQADA--CLQAEPILAFPAEP 158

[Close]

BLAST of MELO3C029564.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CJZ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00680 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.86e-10
Identity = 46/96 (47.92%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 91  ADPNSRMKTNPLRIVAGRTHPAASPPTRVSS-------HPAPACTRKPCHVHLQATLVRT 150
           ADPN+R+KT+PL I      PAAS P   +        HP  A T +   VH QA  +R 
Sbjct: 82  ADPNNRVKTDPLCIATRPERPAASRPLHTAPAYKLRRVHPQAASTCESRRVHPQAAPLRI 141

Query: 151 RVRALLHELIPSRAASPFYLQAESIPALPAESPNPF 179
           R  A L E IPSRA     LQ E IPA PAES NPF
Sbjct: 142 RASAFLREPIPSRAD--VCLQTEPIPAFPAESSNPF 175

The following BLAST results are available for this feature:

BLAST of MELO3C029564.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059970.1	1.58e-12	38.04	hypothetical protein E6C27_scaffold340G00100 [Cucumis melo var. makuwa] >TYJ9722...	[more]
KAA0049747.1	7.97e-10	47.92	hypothetical protein E6C27_scaffold76G00960 [Cucumis melo var. makuwa] >TYK12131...	[more]

BLAST of MELO3C029564.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C029564.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXT8	7.65e-13	38.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CJZ1	3.86e-10	47.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C029564.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029564.jh1.t1	MELO3C029564.jh1.t1	mRNA