MELO3C029523 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029523
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr05: 21546416 .. 21551649 (-)
RNA-Seq Expression	MELO3C029523
Synteny	MELO3C029523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGACACATAGGCCCATGGATCCATACATCTCGATCGGAAAAGAATCAATAGAAAAAGAAAAGAATCGGAATTGATCGATATATTTCTCGAAACAAACGAAAAAACGAAACGAAGACGAAACATAAATCATGGATCAACTAAGCCAAGCCCCTCTCGGGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAATAAGGTTTGATCCTATTCATGGGGATTCCGTAAATATTCCATTCCAAAAAGAGAAAGTTCCGAACAAGTGGGATTTTTTTGGCGATGGATGCAGTTACTAATTCATGATCTGGCATGTACAGAATTGAAAACTTCATTCTCGATTCTACGTAGAATTTTGTATGGAAAGCACTTTCATTTGCTTCTCTTCGATGGAAGTTTTATTTTCCCAGAATGTATCCTAATTTTTGGCCCTAATCTTTCTTCTGATGATCGATTCAACCTCTGATCAAAAAGATATACCATGGTTATATTTCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCCGACTGGAGAGAACAGGCAACCTATGCATTAGCTTTTCGGGAAATTTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCCGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCTACTCTAGGAGGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCAAGAAATAGTAAATGGTCTTCTCAATACACAAATGTATAACTCCCCAGGAATTTCAATTGCGCTTATATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCCCAGCCCCTTCTCATCAATGGACTCCTGACGTATACGAAGGAGTGCGGTTCGTTCGATAAATTCCTACCTCTCTATCTATCTCTGAGATGTTTGGATTTTTCAAAACTTCATGGACATGCAGAAGAGAAATACTATCCCACTCGGACCAAGACATAACTTTTACTTGTTCAAATAACAATTAAGGTGAAGCAGGGTCAGGAACAACGAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTCGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAATACTTGAATTCTCGATGTAGATGCTACATAGTTGGTTCTCATCCTTCAGAGACTACGAGTGTAATAGGAGCATCCGTCGACAAAAGGATCACCCTAAGATGATCATCACATGGCTATTGAGAACGAATCAAATCAGATGGTTCTATTTCTCAATCTTTCTGACTTGCTCCTACGGAACTAAGGTCGAAAAGATTGAGAAAAATCAGTCATTCACAACCACTGATGAAGGATTCCTCGAAAAGTTAAGGATTAGTAATCCTTTTTAGAAATCGAATGGATTCGGTCTTATACATACGCGAGGAAGGTAATCAAAAAAGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCGGAATTGTCTTTCATTCCAAGGCATAACTTGTATCCATGCGCTTCATATTCGCCTGGAGTTCGCTCCCAGAAATATAGCCATCCCCACCCCCTCACGTCAATCCCACGAGCCTCTTATCCATTCTCATTCGATCACGGCGGGGGAGCAAGTCAAAATAGAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCGAACTGATGACTTCCGCCACGTCAAGGCGACACTCTACCGCTGAGTTATATCCCTTCCCTTGCCCCCATCGAGAAATAGAACTGACTAATCCTAAGGCAAAGGGTCGAGAAACTCAACGCCACTATTCTTGAACAACTTGGAATTGGGCCTTCCTTTTTTCGCACTATTACGGATACGAAAATGAAAATAATGGGCAAAATTGTATTCAATTGTCAACAGCTCCTATCGTAAATAGGATTGACTACGGATTCGAGCCATAGCACACGGTTTCATAAAACCGTACGATTTTCCCGATCTAAATAAAGCAGGTTTTACATGAAGAAGATTTGGCTCAGCATGTTCTATTCGATACGGGTAGGAAAAGAACCCAACTCGGTATTATTAAAAAAATAGAGAAATCAGAACCCAGTCAAGATGATATGGATCAACCCCCTTCTTGTGCCAAAGATCTTACCATTTCCGAAGGAACTGGAGTTAGATCTCTTTTCCATTTCCATTCCAGAGTTTTTATGTGTTTCCACGCCCCTTCGAGACCCCGAAAAATGAACAACTTTTCTTCGGAACACATACAAGATTCGTCATTGCAAAAAGGATAATGGTAACCCCACCATTAACTACTTCATTTATGAATTTCATAGTAATAGAAATACATGTCCTACCGCGACAGAATTTGTAACTTGCTATCCTCTTGCCTAGCAGGCAAAGATTTACCTCCGTGGAAAGGATGATTCATTCGGATCGACATGAGAGTCCAACTACATTGCATTGCCAGAATCCATGTTGTATATTTGAAAGAGGTTGACCTCCTTGCTTCTCTCATGTTACAATCCTCTTCCCACCGAGCCCCCTTTCTCCTCGATCCACAGAGAAAAAATGGAGGACTGGTGCCAACAGTTCATCACGGAAGAAAGGACTCACTGAGCGGAGATCACTAACTAATACTAATCTAATAATACTACTAATAGAATAGAAAAGAACTGTCTTTTCTGTATACTTTCCCCGGTTCCGTTGCTACCGCGGGCTTTACGCAATCAATCGGATCATATAGATATCCCTTCAACACAACATAGGTCATCGAAAGGATCTCGGAGACCCACCAAAGCACGAAAGCCAGAATCTTTCAGAAAATGGATTCCTATTCGAAGAGTGCATAACCGCATGGATAAGCTCACACTAACCCGTCAATTTTGGATCCAATTCGGAATTTTAGGTATCGGGAAGGAATTGGAATGTAATAATATCGATTCATACAGATACAGAAGAAAAGGTTCTCTATTGATTCAAACACTGTACCCGCGGGATGGAGAGGGATAGAGAAAGAAAGAGGAAAAAAACGAAGATTTCACATAGTACTTTTGATCGAAAAATCAATCCTGATTTATTCGTACCTTTCGCTCAATGAAAAAAAATGGGTCAGATTCTACAGGATCAAACCTATGGGACTTAAAGGAATGATCGAAGGGAATAAAAAAAGAAAAAAAAAGAGAGGGAAAAATAAGTAAATAAAAATGACGTAGAAGAGCCCAGATTCCAACATGAATGAAAACGTGACTGAATGGTCCCGGTCACTCTTCGGGACGGAATGGAAGAAGGGAGGAGATTCTCGAACGAGGAAAAGGATCAATGACTTCGAAAGAATTGAACGAGAGAGCCGTATGAGGTGAAAATCTCACGTACGGTTCTGTCGAGTGGCAGTAGAGGGTGACTTATCTGTCAACTTTTCCACTATCACCCCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAACATTCTGTAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTACCCGGTGTGAGATATCACATTGTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCGTTTGTAGATTCTTATCCAAGACTTGTATCATTTGATGATGCATGTGAATCGCTAGAAACATGTGAAGTGTAGGGCTACCCCAATAACGAAAGTTCGTAGGGAACTGGAGCAGGCTACCATGAGACAAACAAAAGATCTTCTTTCTAAAGAGATTCGATTCGGAACTATTATATGTCCAAGGTCCATATTGAAATAATTCAGAGGTTTTCCTTGACTTTGTCCGTGTCAACAAACAATTTCGAAATGCCTCGACTTTTTTAGAACAGGTCCGAGTCAAATAGTAATGATTCGAAGCCACCTCTTTTTACACTATTTCGGAAACCCAAGGACTCAATCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAGGAAAGGGAGGGAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAGATACATATAGAATTCTGTGGAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCATATCTTTCGAGATCCACCCTACAATATGGGGTCAAAAAGCCAAAATAAATGATTTTAGCCCTTATAAAAAGAAAACTTATTCTTGAACCCCTTTCACGCTCATGTCACGTCGATGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACATGGAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGGACGTGTAGGCGGATCAACTCATCAAGTTCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCAGCCCGGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTGTCGTTAATCCATGAACAGGATCTATATAGACACATAGCCCATGGATCCATACATCTCGATCGGAAAAGAATCAATAGAAAAAGAAAGAATCGGAATGATCGATATATTTCTCGAAACAAACGAAAACGAAACGAAAGACGAAACATAAATCATGGATCAACTAAGCCAAGCCCTCTCGGGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAATAA

mRNA sequence

ATAGACACATAGGCCCATGGATCCATACATCTCGATCGGAAAAGAATCAAAATTGATCGATATATTTCTCGAAACAAACGAAAAAAGAAACATAAATCATGGATCAACTAAGCCAAGCCCTCTCGGGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAATAA

Coding sequence (CDS)

ATGGATCCATACATCTCGATCGGAAAAGAATCAAAATTGATCGATATATTTCTCGAAACAAACGAAAAAAGAAACATAAATCATGGATCAACTAAGCCAAGCCCTCTCGGGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAATAA

Protein sequence

MDPYISIGKESKLIDIFLETNEKRNINHGSTKPSPLGDLLKNKKEESHVNTME

Homology

[Close]

BLAST of MELO3C029523 vs. NCBI nr
Match: VVM33002.1 (hypothetical protein [Terribacillus sp. AE2B 122])

HSP 1 Score: 71.2 bits (173), Expect = 2.9e-09
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 1  MDPYISIGKESKLIDIFLETNEK----RNINHGSTKPSPLGDLLKNKKEESHVNTME 54
          M+PYISI KESKL++I LETNEK    +NINHGS KPS   DLLKN+KEES+VNT E
Sbjct: 1  MNPYISIEKESKLMNISLETNEKETKNKNINHGSIKPS--RDLLKNEKEESYVNTTE 55

[Close]

BLAST of MELO3C029523 vs. NCBI nr
Match: KZN08868.1 (hypothetical protein DCAR_001524 [Daucus carota subsp. sativus])

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-05
Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 9  KESKLIDIFLETNEKRNINHGS--TKPSPLGDLLKNKKEESHVNTME 54
          KES+LIDIFLETNEK   +      + SPLGD LKNKKEE HVNTME
Sbjct: 17 KESELIDIFLETNEKETKDETEIMDQLSPLGDFLKNKKEEPHVNTME 63

[Close]

BLAST of MELO3C029523 vs. NCBI nr
Match: GHG78762.1 (hypothetical protein GCM10018980_77390 [Streptomyces capoamus])

HSP 1 Score: 53.9 bits (128), Expect = 4.9e-04
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 13 LIDIFLETNEKRNINHGS--TKPSPLGDLLKNKKEESHVNTME 54
          +ID+FLETNEK   +      + SPLGDLLKNKKE+SHVNTME
Sbjct: 1  MIDLFLETNEKERKDETEIMDQLSPLGDLLKNKKEQSHVNTME 43

[Close]

BLAST of MELO3C029523 vs. ExPASy TrEMBL
Match: A0A166GEJ7 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_001524 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.5e-06
Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 9  KESKLIDIFLETNEKRNINHGS--TKPSPLGDLLKNKKEESHVNTME 54
          KES+LIDIFLETNEK   +      + SPLGD LKNKKEE HVNTME
Sbjct: 17 KESELIDIFLETNEKETKDETEIMDQLSPLGDFLKNKKEEPHVNTME 63

The following BLAST results are available for this feature:

BLAST of MELO3C029523 vs. NCBI nr


Match Name	E-value	Identity	Description
VVM33002.1	2.9e-09	70.18	hypothetical protein [Terribacillus sp. AE2B 122]	[more]
KZN08868.1	2.0e-05	68.09	hypothetical protein DCAR_001524 [Daucus carota subsp. sativus]	[more]
GHG78762.1	4.9e-04	65.12	hypothetical protein GCM10018980_77390 [Streptomyces capoamus]	[more]

BLAST of MELO3C029523 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C029523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A166GEJ7	9.5e-06	68.09	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_001524 ...	[more]

BLAST of MELO3C029523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029523.1	MELO3C029523.1	mRNA