MELO3C029484 (gene) Melon (DHL92) v4

Overview
NameMELO3C029484
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionLysine histidine transporter-like 6
Locationchr02: 5988891 .. 5990243 (+)
RNA-Seq ExpressionMELO3C029484
SyntenyMELO3C029484
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGTTGAACTTGTGTTGATATTGTATTTATGTTGATTTGATGTGATGTGGTTCGATCTCTAGAATTTGATCCTCTGATTCTCTCTCGTCTGGATGCTTAGAAGCGAAGCACGTGATGTTTTTGAAGTTGGAGTCTTGGAAGAAAGCTTGTATCTTCGAAGAAGCTTCAATTTTCGAGGGTGTTCTTGAAGTTGAAGACTTGGAAGAAAGCTTGGATCTTCAAAGGAGCTTCAATCTTCGAAGGTGTTCTTGAAGTTGGAGACTTGGAAGAAAGCTTGGATCTTCAAAGGAGCTTCAATCTTCAAAGTAGCTTCAATCTTCGAAGGTGTTCTTGAAGTTGAAGACTTGGAAGAAAACTTGTATCTTCAAAGGAGCTTCAATCTTTGAGGGTGTTCTTGAAGTTGGAGTCTTGGAAGAAAGTTTGTATCTTCAAAGAACTTTGATCTTCGAGGTTGGTTGACCTTCAGGAGTTGAGGAGGCTTCTATCTCTTGGGAGAATCCTCTTTAGACCTTATGGAGTCAAAAAATTCCAACCACCACAAATGAAGAGAACTCCTCTATTTATAGAGTTCCCTGGTGGGCTTTTATGGACTTGAGCTTGTTCTGGTCCATGGACCATACCCATGGGCTCAATCACATGGATTTGGGTCATATTTTATTTTAGGCTAAATTAAGCTTATTTTTTGGCTCAATTGAATTTTAGCCTAACTAAATAATATTTAATTGAATCAAAATAATTAATTTGACCCAATTGTCATAATAAAGACACGCGACATCATTAAAATTGTCCAATTTGTCTTTAAATTTAATTTGGGACACATGCCAATTTTTAGTTAATCCCACATATAATTATTTTAGTAAATGATGTGGCAATTTGTGATTGGTTCCAAAATTTCTTATTCAACAGCCACTTTTTATCCTTTCAATATCTCTTAACACCAAAATAGTTTTAACTACAAGTTCTTGATACTTTTTATAAAGGTTTACCAAATTCTTGTTTATAACTTTTTATAATTGTTAATTTTATTTTCTTAACTCAATTTATGATTCTTAGTTTTTTTTAATTATTAGAGTTTCTAATTTTCTTTATTATTGTTGATAAGATGTATTTAGGTTGTGATGATCTACAACTGAAATTTATTTTCTTTTTTGATCTTTGTTAACTGGTCGCATTCCTACAATTTTTCTTATCAAGGTAATTACTCCTTCGGTTTTCACACCATATTTTTTTTTAAAGGAATTTTACATTTGAATAATGGATACTTGAACTTTTTTAGTTTTTTTAGTTTTTTTTTTGTTAATTTTTACTTCTTTTTAGAAAACAATTTTCACAGAGGACTCAAGGATAGGTGA

mRNA sequence

GGAGTTGAACTTGTGTTGATATTGTATTTATGTTGATTTGATGTGATGTGGTTCGATCTCTAGAATTTGATCCTCTGATTCTCTCTCGTCTGGATGCTTAGAAGCGAAGCACGTGATGTTTTTGAAGTTGGAGTCTTGGAAGAAAGCTTGTATCTTCGAAGAAGCTTCAATTTTCGAACTTGGAAGAAAGCTTGGATCTTCAAAGGAGCTTCAATCTTCGAAGGTGTTCTTGAAGTTGGAGACTTGGAAGAAAGCTTGGATCTTCAAAGGAGCTTCAATCTTCAAAGTAGCTTCAATCTTCGAAGAAAACAATTTTCACAGAGGACTCAAGGATAGGTGA

Coding sequence (CDS)

ATGCTTAGAAGCGAAGCACGTGATGTTTTTGAAGTTGGAGTCTTGGAAGAAAGCTTGTATCTTCGAAGAAGCTTCAATTTTCGAACTTGGAAGAAAGCTTGGATCTTCAAAGGAGCTTCAATCTTCGAAGGTGTTCTTGAAGTTGGAGACTTGGAAGAAAGCTTGGATCTTCAAAGGAGCTTCAATCTTCAAAGTAGCTTCAATCTTCGAAGAAAACAATTTTCACAGAGGACTCAAGGATAG

Protein sequence

MLRSEARDVFEVGVLEESLYLRRSFNFRTWKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQSSFNLRRKQFSQRTQG
Homology
[Close]
BLAST of MELO3C029484 vs. NCBI nr
Match: KAA0041772.1 (hypothetical protein E6C27_scaffold67G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 6.0e-14
Identity = 50/81 (61.73%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 8   DVFEVGVLEESLYLRRSFNFR------------------------TWKKAWIFKGASIFE 65
           DV EVG LEESL L+RSFN R                        TWKKAWIFKGASIFE
Sbjct: 84  DVLEVGDLEESLDLQRSFNLRSWSFGRKLGSSKELQSLKVFVKLETWKKAWIFKGASIFE 143

[Close]
BLAST of MELO3C029484 vs. NCBI nr
Match: KAA0035168.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-13
Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = 0 

Query: 14 VLEESLYLRRSFNFRTWKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQSSFNLR 71
          + EE+         +TWKKAWIFKG SIFEGVLEVGDLEESLDLQRSFNL+ SFNLR
Sbjct: 19 IFEEASIFEGVLKLKTWKKAWIFKGVSIFEGVLEVGDLEESLDLQRSFNLRKSFNLR 75

[Close]
BLAST of MELO3C029484 vs. NCBI nr
Match: KAA0034533.1 (lysine histidine transporter-like 6 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 1.7e-13
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 7   RDVFEVGVLEESLYLRRSFNFRT-WKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQS 66
           + V EVGVL+ESLYL+R+  F   WKKA IFKGASIFEGVLEVG LEES  LQRSFNL+ 
Sbjct: 392 KGVLEVGVLKESLYLQRTLIFEVGWKKACIFKGASIFEGVLEVGVLEESFYLQRSFNLRR 451

Query: 67  SFNLR 71
           +F+LR
Sbjct: 452 TFDLR 456

[Close]
BLAST of MELO3C029484 vs. NCBI nr
Match: TYK09087.1 (lysine histidine transporter-like 6 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 1.7e-13
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 7   RDVFEVGVLEESLYLRRSFNFRT-WKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQS 66
           + V EVGVL+ESLYL+R+  F   WKKA IFKGASIFEGVLEVG LEES  LQRSFNL+ 
Sbjct: 399 KGVLEVGVLKESLYLQRTLIFEVGWKKACIFKGASIFEGVLEVGVLEESFYLQRSFNLRR 458

Query: 67  SFNLR 71
           +F+LR
Sbjct: 459 TFDLR 463

[Close]
BLAST of MELO3C029484 vs. NCBI nr
Match: KAA0035201.1 (uncharacterized protein E6C27_scaffold346G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 29  TWKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQSSFNLRRKQFSQR 78
           TWKKAWIF+GASIFEGVLEVGDLEESLDLQRSFNL+ S++L RK  S +
Sbjct: 158 TWKKAWIFRGASIFEGVLEVGDLEESLDLQRSFNLR-SWSLERKFVSSK 205

[Close]
BLAST of MELO3C029484 vs. ExPASy TrEMBL
Match: A0A5A7TED0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G001270 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-14
Identity = 50/81 (61.73%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 8   DVFEVGVLEESLYLRRSFNFR------------------------TWKKAWIFKGASIFE 65
           DV EVG LEESL L+RSFN R                        TWKKAWIFKGASIFE
Sbjct: 84  DVLEVGDLEESLDLQRSFNLRSWSFGRKLGSSKELQSLKVFVKLETWKKAWIFKGASIFE 143

[Close]
BLAST of MELO3C029484 vs. ExPASy TrEMBL
Match: A0A5A7SX34 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002680 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.9e-14
Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = 0 

Query: 14 VLEESLYLRRSFNFRTWKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQSSFNLR 71
          + EE+         +TWKKAWIFKG SIFEGVLEVGDLEESLDLQRSFNL+ SFNLR
Sbjct: 19 IFEEASIFEGVLKLKTWKKAWIFKGVSIFEGVLEVGDLEESLDLQRSFNLRKSFNLR 75

[Close]
BLAST of MELO3C029484 vs. ExPASy TrEMBL
Match: A0A5D3CAQ8 (Lysine histidine transporter-like 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00770 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.4e-14
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 7   RDVFEVGVLEESLYLRRSFNFRT-WKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQS 66
           + V EVGVL+ESLYL+R+  F   WKKA IFKGASIFEGVLEVG LEES  LQRSFNL+ 
Sbjct: 399 KGVLEVGVLKESLYLQRTLIFEVGWKKACIFKGASIFEGVLEVGVLEESFYLQRSFNLRR 458

Query: 67  SFNLR 71
           +F+LR
Sbjct: 459 TFDLR 463

[Close]
BLAST of MELO3C029484 vs. ExPASy TrEMBL
Match: A0A5A7SVL3 (Lysine histidine transporter-like 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005480 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.4e-14
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 7   RDVFEVGVLEESLYLRRSFNFRT-WKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQS 66
           + V EVGVL+ESLYL+R+  F   WKKA IFKGASIFEGVLEVG LEES  LQRSFNL+ 
Sbjct: 392 KGVLEVGVLKESLYLQRTLIFEVGWKKACIFKGASIFEGVLEVGVLEESFYLQRSFNLRR 451

Query: 67  SFNLR 71
           +F+LR
Sbjct: 452 TFDLR 456

[Close]
BLAST of MELO3C029484 vs. ExPASy TrEMBL
Match: A0A5A7T0T2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold346G00240 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.1e-11
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 29  TWKKAWIFKGASIFEGVLEVGDLEESLDLQRSFNLQSSFNLRRKQFSQR 78
           TWKKAWIF+GASIFEGVLEVGDLEESLDLQRSFNL+ S++L RK  S +
Sbjct: 158 TWKKAWIFRGASIFEGVLEVGDLEESLDLQRSFNLR-SWSLERKFVSSK 205

The following BLAST results are available for this feature:
BLAST of MELO3C029484 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041772.16.0e-1461.73hypothetical protein E6C27_scaffold67G001270 [Cucumis melo var. makuwa][more]
KAA0035168.11.0e-1371.93Ulp1-like peptidase [Cucumis melo var. makuwa][more]
KAA0034533.11.7e-1370.77lysine histidine transporter-like 6 [Cucumis melo var. makuwa][more]
TYK09087.11.7e-1370.77lysine histidine transporter-like 6 [Cucumis melo var. makuwa][more]
KAA0035201.11.1e-1079.59uncharacterized protein E6C27_scaffold346G00240 [Cucumis melo var. makuwa][more]
BLAST of MELO3C029484 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029484 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TED02.9e-1461.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SX344.9e-1471.93Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G0... [more]
A0A5D3CAQ88.4e-1470.77Lysine histidine transporter-like 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7SVL38.4e-1470.77Lysine histidine transporter-like 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7T0T25.1e-1179.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C029484 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029484.1MELO3C029484.1mRNA