MELO3C029442 (gene) Melon (DHL92) v4

Overview
NameMELO3C029442
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Locationchr01: 16250869 .. 16251588 (+)
RNA-Seq ExpressionMELO3C029442
SyntenyMELO3C029442
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGTATTGGCTATCCTACAGTTATGGTAGCCTTTGTAGTTGGAAGTTAGTTTTAGTGAAAAACTTGAGAGATTGTATATTACTAAAAAATAGTGAAAATTCAGGGGAGTAAGTTATGGATGTGAGAGAGGGAGAGATATATGTTTCTAATCAAATCTATTTACGTTTTAGGGACTTAAACGATGGACAAAGGTTGGATGAAAATTAGAAATAAGTTCTCCCTTGAGTATAGACAGGGAGTAACCCAATTTTTAAGAATTTGCCAAGTTTCACGTTGATGCCTACGAACGATTAAGGTGTCCATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTGGAACGACATCTACTGACTATTGAATATCCCTCTACTACACATAACGGATGTATCATGGAGAGTTATTAAGCTTTAGAGGTACAAAAAAATTTGAGGAAGGAACTAGTAGTAATCCTTTTGATGAAGGAACTAGTATTATGCAATTTAATGAAGAAGATAATATGTTTGGTATGCTAAATGATTTACAAGCCCCAATTGAACAGGAAGAGTAAACAGAGGAACGTCGTTTGGAAGATGAAATGTCGATGATTGTTGGGGTAGATATAGATGAAGATAGAACAAACATATTTCCAGACTTATTGAATGAAGCACATAATGAGTTGTACCCCAGTTGTTCTAAATTTTCGTCGTTGATTTTTTTGGTTAAGTTGA

mRNA sequence

GTTGTATTGGCTATCCTACAGTTATGGGACTTAAACGATGGACAAAGGTTGGATGAAAATTAGAAATAAGTTCTCCCTTGAGTATAGACAGGGAGTAACCCAATTTTTAAGAATTTGCCAAGTTTCACGTTGATGCCTACGAACGATTAAGGTGTCCATGCAAGAGATGTTTGAATTTAAATTGGAGCTCATTAGAGGGTGTGGAACGACATCTACTGACTATTGAATATCCCTCTACTACACATAACGGATGTATCATGGAGAGTTATTAAGCTTTAGAGGTACAAAAAAATTTGAGGAAGGAACTAGTAGTAATCCTTTTGATGAAGGAACTAGTATTATGCAATTTAATGAAGAAGATAATATGTTTGGTATGCTAAATGATTTACAAGCCCCAATTGAACAGGAAGAGTAAACAGAGGAACGTCGTTTGGAAGATGAAATGTCGATGATTGTTGGGGTAGATATAGATGAAGATAGAACAAACATATTTCCAGACTTATTGAATGAAGCACATAATGAGTTGTACCCCAGTTGTTCTAAATTTTCGTCGTTGATTTTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGTATCATGGAGAGTTATTAAGCTTTAGAGGTACAAAAAAATTTGAGGAAGGAACTAGTAGTAATCCTTTTGATGAAGGAACTAGTATTATGCAATTTAATGAAGAAGATAATATGTTTGGTATGCTAAATGATTTACAAGCCCCAATTGAACAGGAAGAGTAA

Protein sequence

MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE
Homology
[Close]
BLAST of MELO3C029442 vs. NCBI nr
Match: KAA0051316.1 (uncharacterized protein E6C27_scaffold55G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 5.1e-17
Identity = 47/54 (87.04%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 1  MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
          MYHGE LSFRGTK FEEGTSSNPFDEGTS   FNEED MFGMLNDLQAPIE EE
Sbjct: 45 MYHGESLSFRGTKNFEEGTSSNPFDEGTSSRPFNEEDEMFGMLNDLQAPIEHEE 98

[Close]
BLAST of MELO3C029442 vs. NCBI nr
Match: TYK19759.1 (GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 5.6e-16
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 1  MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
          +YHGELLSFRG + FEEGTSSNPFDE TS  QFNEED+MFGMLNDLQAPIE EE
Sbjct: 9  VYHGELLSFRGIENFEEGTSSNPFDEETSSSQFNEEDDMFGMLNDLQAPIESEE 62

[Close]
BLAST of MELO3C029442 vs. NCBI nr
Match: KAA0061623.1 (GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 5.6e-16
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 1  MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
          +YHGELLSFRG + FEEGTSSNPFDE TS  QFNEED+MFGMLNDLQAPIE EE
Sbjct: 9  VYHGELLSFRGIENFEEGTSSNPFDEETSSSQFNEEDDMFGMLNDLQAPIESEE 62

[Close]
BLAST of MELO3C029442 vs. NCBI nr
Match: KAA0044270.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 0 

Query: 1   MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
           +YHGE LSFRGT+ FEEGT +NPFDEGTS  QF+EED++FGMLNDLQAPIEQEE
Sbjct: 89  VYHGESLSFRGTENFEEGTINNPFDEGTSSRQFSEEDDIFGMLNDLQAPIEQEE 142

[Close]
BLAST of MELO3C029442 vs. NCBI nr
Match: TYK11771.1 (uncharacterized protein E5676_scaffold304G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 4.8e-15
Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 0 

Query: 1   MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
           +YHGE LSFR T+ FEEGTSSNPF EGTS  QFNEED MFGMLNDLQAP+E EE
Sbjct: 235 VYHGESLSFRDTENFEEGTSSNPFGEGTSSRQFNEEDEMFGMLNDLQAPVEHEE 288

[Close]
BLAST of MELO3C029442 vs. ExPASy TrEMBL
Match: A0A5A7UAT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00290 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-17
Identity = 47/54 (87.04%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 1  MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
          MYHGE LSFRGTK FEEGTSSNPFDEGTS   FNEED MFGMLNDLQAPIE EE
Sbjct: 45 MYHGESLSFRGTKNFEEGTSSNPFDEGTSSRPFNEEDEMFGMLNDLQAPIEHEE 98

[Close]
BLAST of MELO3C029442 vs. ExPASy TrEMBL
Match: A0A5D3D8I5 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3861G00140 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 1  MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
          +YHGELLSFRG + FEEGTSSNPFDE TS  QFNEED+MFGMLNDLQAPIE EE
Sbjct: 9  VYHGELLSFRGIENFEEGTSSNPFDEETSSSQFNEEDDMFGMLNDLQAPIESEE 62

[Close]
BLAST of MELO3C029442 vs. ExPASy TrEMBL
Match: A0A5A7V0F7 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3980G00070 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 1  MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
          +YHGELLSFRG + FEEGTSSNPFDE TS  QFNEED+MFGMLNDLQAPIE EE
Sbjct: 9  VYHGELLSFRGIENFEEGTSSNPFDEETSSSQFNEEDDMFGMLNDLQAPIESEE 62

[Close]
BLAST of MELO3C029442 vs. ExPASy TrEMBL
Match: A0A5A7TM28 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2741G00290 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 0 

Query: 1   MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
           +YHGE LSFRGT+ FEEGT +NPFDEGTS  QF+EED++FGMLNDLQAPIEQEE
Sbjct: 89  VYHGESLSFRGTENFEEGTINNPFDEGTSSRQFSEEDDIFGMLNDLQAPIEQEE 142

[Close]
BLAST of MELO3C029442 vs. ExPASy TrEMBL
Match: A0A5D3CIW6 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00980 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-15
Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 0 

Query: 1   MYHGELLSFRGTKKFEEGTSSNPFDEGTSIMQFNEEDNMFGMLNDLQAPIEQEE 55
           +YHGE LSFR T+ FEEGTSSNPF EGTS  QFNEED MFGMLNDLQAP+E EE
Sbjct: 235 VYHGESLSFRDTENFEEGTSSNPFGEGTSSRQFNEEDEMFGMLNDLQAPVEHEE 288

The following BLAST results are available for this feature:
BLAST of MELO3C029442 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051316.15.1e-1787.04uncharacterized protein E6C27_scaffold55G00290 [Cucumis melo var. makuwa][more]
TYK19759.15.6e-1683.33GDSL esterase/lipase [Cucumis melo var. makuwa][more]
KAA0061623.15.6e-1683.33GDSL esterase/lipase [Cucumis melo var. makuwa][more]
KAA0044270.12.1e-1579.63CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK11771.14.8e-1579.63uncharacterized protein E5676_scaffold304G00980 [Cucumis melo var. makuwa][more]
BLAST of MELO3C029442 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029442 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UAT82.5e-1787.04Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D8I52.7e-1683.33GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386... [more]
A0A5A7V0F72.7e-1683.33GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold398... [more]
A0A5A7TM281.0e-1579.63CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3CIW62.3e-1579.63DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of MELO3C029442 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029442.1MELO3C029442.1mRNA