MELO3C029425 (gene) Melon (DHL92) v4

Overview
NameMELO3C029425
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptiontarget of rapamycin
Locationchr02: 4255843 .. 4259059 (-)
RNA-Seq ExpressionMELO3C029425
SyntenyMELO3C029425
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCGGAAAAACCCCTATTCCCAACGCTGTTCACGACCCACTGTGCATGGCGTCGGGAATAGTTCGTTTTTTAAAATTAATTTACCCTTTTCCCGACAAATACTTGTCGACGCCTTCTTAATGCGTCGGGAAAGAGTGTTTTTCCCGACGCGGTGTTGATGGCGTCAGGAAAGCCCTTATTCCCGACGTTCTTTATGCTGACGTCATTTTTGGCATCAGGAATGTTCCATTTTCTTGTAGTGTAAGTTAGTGTTTTTATTTCAATTCATATAAACCCAACTTTGTCAATGCCCCAAACACCCCTAACTTGTATTTGAGATTATGACTATGACAAACTAATACTTTTTATGCAAGGCTTAATTAACTTAGATCCCTATACTAAAACATTTTATTTACTTAATTTGAAATGTTGTCAACTTTATATTGCATTACTTTTTTCTGCAATTGGCAAAGTGAACTTTATGGAGCACCTTACAAAGAATTTTTAGAAGTGCTTACCCTTTATAAATTTTTAAAAGTTCACAAATCACGAATCTAAGACACAACAACGGGTTAAACGGCCCTAAGTTGAAGAGTGTCTGGTGATGGATGGGTTTATTTACCTATATCCAACTCGCTTGCACCCTAGATGTTTTTGTTTTGATGGATTTTCACTCGGGCCTTAGTCTTTTCTCTCCGTCTTCTTCACATATCTTTTTCTTTCACTGTTCTCCCAAGTTTTGAGAAGTATCTCTAATGGTGTTTGTTGATGCAATGTAAATTTCATACCTGCAAGATTAGCATAGCAAAGGGAAGAAAAAGAACTCGGAAAGCTACATGGCTCAACAAAAACATCTACATTCATTTGAGGATTCTTTTTTAAAGAAATGCACAGATAAGGTTTTTCCTCTCTACTAAAATAATGTATCTAAAATATATTTTTAAGTTACAGATTTGTAAGTTTGTTAAGAGATAAGAAAAATAGACATTGAAGTCGCTTGATATTTCAATTCTCCACCTTGAACCAAACATCTTTGATCTTCAAGCCTTTCGAATATGACTTTTTTGCCTGGAATTGCTTGTCTTGCTTTTTTTTTTGTATGGTCACTAAACTGCATGTCTGGCTTTCATCTGATAGGTACTATAGAATGTTTGGCACACAAGATGGGTTGGTTGGGTAAAAATGCTCCTGTTCACAGGATTCATGGTTCCTTACTTGCAGTTGGTGAGCTCTTGAGGTTAGTGTAGATGGTATATTTTGGATGCATGAATTATTGTAGTGCTGTCTTCCCTTGTATCCGTGTTTTGTGAAGGGTGATTTTTAATGTCTTAATTTTTTCACGCAATATCTTATGATTTTCCTTTCTTTAGTTGTAAATAATTTTGAAACATCACTGTGTTTTTTATCTATGGTCTCCTCTTGGGTGCTCCTAACGAGTTTTATTATACATCCCTTGATCTTTTTGGCTTTGACTTGGGTGGGTCCTTACCTTTTTTGTGTGTAATTCATCACATTACGAATTTTTGGTTTCCTTTTAAAAAATAATATGCACTACTTTCATTCTGGTCCCAGTAGTTCTGCTTTATAATAGATGTTCATAATAATTTTTCCTTGCTATTTCACAATAGTTAGAATGCATTGTTGATCTTAATCATGATTTTCGTTTCTCTACTTGTTTCAGAAGCAACCCAAAAACAATTAGGAGAACAATGAGAGTAAAAAGGTCTCACCCTTTATTACTTAAAATCGCACCTTCATATCGCCATTCTACTGAATGTGTGTGTAATTTTCCTTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTGAGAAGAGGGGAGGTTCTTTGACTATCTGCCATTAAGCAATTGGAATTTGAGGTTGTATTCTTAACCTCCAAAACTTTTTTTAGTGAGAAAGTTCTTCCATTGTAATATTTACACCATATGTTTTCTGCCCTTGTGCTGGGAGAAATATCGGCTTGGCCTGAAAGCAATCGTTCAAGAATCAATGAGAACTCCTAAGGATGGTACAAACTTCCCCATCTAAACAATTAGGACTTATAGTTCCTTTTCTTATTTTGCTTCCTTTGGGAGTTTATTTCCATGGAACATTATTTTTGTATCTTTTTCATTACTTTTCTAATGCGTTCCTACCTTGTTAAAGAAGAAAAAAAAAGTTCATTTTTCCAGCATCTTTTGAAATGTTTTGTGATGGGGTGAGGTGGGGAATTCCTCATTAGTTTTATAATTGTTTTATTCTTTCGTTCAAAATTTTAAATTACAAAAATAAAAAGTAATAATGAAATATATTTTTTAAAAAATGATAGAACTTCGGACGCATAAATATGAACGTCGGGAGATCATAAGCACTCTTTTTTTTGTCATATTAAATAATAATGTTTTTATTTGACAGTTTGATTCATTGCTATTTTTGTTTCTTCCATAAACTTGTTTAGTATATATGAAACATGTACAAATATTATGGGTTATATGCATCTATATTTAGATGTAAACTGTTTTATATCACTGCGTATATATTTTATACTTAATATAGTTTGTCATATTCTCATATTTAATTTTATTTTGTCATTCTTGATCGTGAGTTTAGTCCAGTCACCAATGAGGTTTGTTTGACTTGTTATGAGAGTAGCAAATCAATTATGAAGTACGTGAGAGCTTGGGATGAGATTTTAGTGTTGTAATAGAGGAAGCTCAATCAAAGTTTGGAAAACACTAGCTTATGGAGGTGATCTCACACTTAGAGGAACCTAAATATGTTGCATCGTAGGTATCTTATGTAGAAATTGGAAATTAGAGGATCTCAAACTTAAGTTAAAGCTAAAGAGTAAATTGTACGTGATACATTGGAGATGAAGTTTTTTAGATAAGTACTTCATTCACTACAAGAAGAAGAGGTTCTGCAGACGTAGAGATGCGTCGGCAAATGTTAGATCTACATTGGAAAAGGCTATGTCGACGTAGAAACAGACATCAGTAAGAACGTCGTGAGAAAAGAGTCGTGAAAGGCATTCCCAATGCGCGAACGAGACGACATCGACAAAGTGTTACTGTGGATGCACTGTTCGCCAACATGGTCAACACGTCGGTAGTGGAGAACTATCGACATTTGTTAATGGCGTCGCAAATACCTTACTACCGATGTCGTCAAGTACGCGACGTCAGCAGTGTTATTTGA

mRNA sequence

ATGCGTCGGAAAAACCCCTATTCCCAACGCTGTTCACGACCCACTGTGCATGGCGTCGGGAATAGTTCGTTTTTTAAAATTAATTTACCCTTTTCCCGACAAATACTTGTCGACGCCTTCTTAATGCGTCGGGAAAGAGTGTTTTTCCCGACGCGGTGTTGATGGCGTCAGGAAAGCCCTTATTCCCGACGTTCTTTATGCTGACGTCATTTTTGGCATCAGGAATGTTCCATTTTCTTGTAGTGTAAGTACTATAGAATGTTTGGCACACAAGATGGGTTGGTTGGGTAAAAATGCTCCTGTTCACAGGATTCATGGTTCCTTACTTGCAGTTGGTGAGCTCTTGAGAAGCAACCCAAAAACAATTAGGAGAACAATGAGAGTAAAAAGGTCTCACCCTTTATTACTTAAAATCGCACCTTCATATCGCCATTCTACTGAATGTATAAGTACTTCATTCACTACAAGAAGAAGAGGTTCTGCAGACGTAGAGATGCGTCGGCAAATGTTAGATCTACATTGGAAAAGGCTATGTCGACGTAGAAACAGACATCAAGTCGTGAAAGGCATTCCCAATGCGCGAACGAGACGACATCGACAAAGTGTTACTGTGGATGCACTGTTCGCCAACATGGTCAACACGTCGGTAGTGGAGAACTATCGACATTTGTTAATGGCGTCGCAAATACCTTACTACCGATGTCGTCAAGTACGCGACGTCAGCAGTGTTATTTGA

Coding sequence (CDS)

ATGGGTTGGTTGGGTAAAAATGCTCCTGTTCACAGGATTCATGGTTCCTTACTTGCAGTTGGTGAGCTCTTGAGAAGCAACCCAAAAACAATTAGGAGAACAATGAGAGTAAAAAGGTCTCACCCTTTATTACTTAAAATCGCACCTTCATATCGCCATTCTACTGAATGTATAAGTACTTCATTCACTACAAGAAGAAGAGGTTCTGCAGACGTAGAGATGCGTCGGCAAATGTTAGATCTACATTGGAAAAGGCTATGTCGACGTAGAAACAGACATCAAGTCGTGAAAGGCATTCCCAATGCGCGAACGAGACGACATCGACAAAGTGTTACTGTGGATGCACTGTTCGCCAACATGGTCAACACGTCGGTAGTGGAGAACTATCGACATTTGTTAATGGCGTCGCAAATACCTTACTACCGATGTCGTCAAGTACGCGACGTCAGCAGTGTTATTTGA

Protein sequence

MGWLGKNAPVHRIHGSLLAVGELLRSNPKTIRRTMRVKRSHPLLLKIAPSYRHSTECISTSFTTRRRGSADVEMRRQMLDLHWKRLCRRRNRHQVVKGIPNARTRRHRQSVTVDALFANMVNTSVVENYRHLLMASQIPYYRCRQVRDVSSVI
Homology
[Close]
BLAST of MELO3C029425 vs. ExPASy Swiss-Prot
Match: Q9FR53 (Serine/threonine-protein kinase TOR OS=Arabidopsis thaliana OX=3702 GN=TOR PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.5e-04
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 4   LGKNAPVHRIHGSLLAVGELLRS 27
           LG+NAPVH IHGSLLAVGELLR+
Sbjct: 263 LGRNAPVHSIHGSLLAVGELLRN 285

[Close]
BLAST of MELO3C029425 vs. TAIR 10
Match: AT1G50030.1 (target of rapamycin )

HSP 1 Score: 45.1 bits (105), Expect = 6.1e-05
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 4   LGKNAPVHRIHGSLLAVGELLRS 27
           LG+NAPVH IHGSLLAVGELLR+
Sbjct: 263 LGRNAPVHSIHGSLLAVGELLRN 285

[Close]
BLAST of MELO3C029425 vs. TAIR 10
Match: AT1G50030.2 (target of rapamycin )

HSP 1 Score: 45.1 bits (105), Expect = 6.1e-05
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 4   LGKNAPVHRIHGSLLAVGELLRS 27
           LG+NAPVH IHGSLLAVGELLR+
Sbjct: 263 LGRNAPVHSIHGSLLAVGELLRN 285

The following BLAST results are available for this feature:
BLAST of MELO3C029425 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C029425 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FR538.5e-0486.96Serine/threonine-protein kinase TOR OS=Arabidopsis thaliana OX=3702 GN=TOR PE=1 ... [more]
BLAST of MELO3C029425 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C029425 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50030.16.1e-0586.96target of rapamycin [more]
AT1G50030.26.1e-0586.96target of rapamycin [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029425.1MELO3C029425.1mRNA