MELO3C029419 (gene) Melon (DHL92) v4

Overview
NameMELO3C029419
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCysteine-rich RLK (RECEPTOR-like protein kinase) 8
Locationchr01: 10315867 .. 10316148 (-)
RNA-Seq ExpressionMELO3C029419
SyntenyMELO3C029419
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGGTAATCCACATCCTTCTTCAAAAATTCCAAGTCCTGAAAAGAAACTCTCAAAAGATGAAGCATCAATAATCAGTGCAAGAAGCGAAGAGTTAGAAATTGAGAATTTAGAGGAGCTGAAGGAACATCAAACAGAACAAGAGGAGTCCGAGATTCTTGATACATTGGGGCCAGACTTTTCCAAGTTATTTGTCTCCAGAATCCAAAGAATCTTGCAAAAAGGGAGCTGCAAGCTTCCCTCAAGAATTGGTTCCTTTCATAACAGCTTGCCAGATTGA

mRNA sequence

ATGCGAGGTAATCCACATCCTTCTTCAAAAATTCCAAGTCCTGAAAAGAAACTCTCAAAAGATGAAGCATCAATAATCAGTGCAAGAAGCGAAGAGTTAGAAATTGAGAATTTAGAGGAGCTGAAGGAACATCAAACAGAACAAGAGGAGTCCGAGATTCTTGATACATTGGGGCCAGACTTTTCCAAGTTATTTGTCTCCAGAATCCAAAGAATCTTGCAAAAAGGGAGCTGCAAGCTTCCCTCAAGAATTGGTTCCTTTCATAACAGCTTGCCAGATTGA

Coding sequence (CDS)

ATGCGAGGTAATCCACATCCTTCTTCAAAAATTCCAAGTCCTGAAAAGAAACTCTCAAAAGATGAAGCATCAATAATCAGTGCAAGAAGCGAAGAGTTAGAAATTGAGAATTTAGAGGAGCTGAAGGAACATCAAACAGAACAAGAGGAGTCCGAGATTCTTGATACATTGGGGCCAGACTTTTCCAAGTTATTTGTCTCCAGAATCCAAAGAATCTTGCAAAAAGGGAGCTGCAAGCTTCCCTCAAGAATTGGTTCCTTTCATAACAGCTTGCCAGATTGA

Protein sequence

MRGNPHPSSKIPSPEKKLSKDEASIISARSEELEIENLEELKEHQTEQEESEILDTLGPDFSKLFVSRIQRILQKGSCKLPSRIGSFHNSLPD
Homology
[Close]
BLAST of MELO3C029419 vs. NCBI nr
Match: TYJ99680.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 2.5e-11
Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 0 

Query: 16  KKLSKDEASIISARSEELEIENLEELKEHQTEQEESEILDTLGPDFSKLFVSRIQRILQK 75
           KKLS+DE+SIISA S+E EIENLEEL+E QTEQEE++ILDTLGPDFSKLF+S       K
Sbjct: 294 KKLSEDESSIISASSKEFEIENLEELEEDQTEQEEAKILDTLGPDFSKLFLSS----ESK 353

Query: 76  GSCK 80
            SCK
Sbjct: 354 ESCK 353

[Close]
BLAST of MELO3C029419 vs. NCBI nr
Match: KAA0054764.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-10
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 0 

Query: 16  KKLSKDEASIISARSEELEIENLEELKEHQTEQEESEILDTLGPDFSKLFVSRIQRILQK 75
           KKLS+DE+SIISA S+E EIENLEEL+E QTEQEE++ILDTLGPD SKLF+S       K
Sbjct: 510 KKLSEDESSIISASSKEFEIENLEELEEDQTEQEEAKILDTLGPDLSKLFLSS----ESK 569

Query: 76  GSCK 80
            SCK
Sbjct: 570 ESCK 569

[Close]
BLAST of MELO3C029419 vs. ExPASy TrEMBL
Match: A0A5D3BIN0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00720 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11
Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 0 

Query: 16  KKLSKDEASIISARSEELEIENLEELKEHQTEQEESEILDTLGPDFSKLFVSRIQRILQK 75
           KKLS+DE+SIISA S+E EIENLEEL+E QTEQEE++ILDTLGPDFSKLF+S       K
Sbjct: 294 KKLSEDESSIISASSKEFEIENLEELEEDQTEQEEAKILDTLGPDFSKLFLSS----ESK 353

Query: 76  GSCK 80
            SCK
Sbjct: 354 ESCK 353

[Close]
BLAST of MELO3C029419 vs. ExPASy TrEMBL
Match: A0A5A7UHY9 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00450 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.9e-11
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 0 

Query: 16  KKLSKDEASIISARSEELEIENLEELKEHQTEQEESEILDTLGPDFSKLFVSRIQRILQK 75
           KKLS+DE+SIISA S+E EIENLEEL+E QTEQEE++ILDTLGPD SKLF+S       K
Sbjct: 510 KKLSEDESSIISASSKEFEIENLEELEEDQTEQEEAKILDTLGPDLSKLFLSS----ESK 569

Query: 76  GSCK 80
            SCK
Sbjct: 570 ESCK 569

The following BLAST results are available for this feature:
BLAST of MELO3C029419 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ99680.12.5e-1171.88putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0054764.11.2e-1070.31Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa][more]
BLAST of MELO3C029419 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029419 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BIN01.2e-1171.88Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7UHY95.9e-1170.31Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
BLAST of MELO3C029419 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029419.1MELO3C029419.1mRNA