MELO3C029361 (gene) Melon (DHL92) v4

Overview
NameMELO3C029361
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr04: 23796172 .. 23796354 (+)
RNA-Seq ExpressionMELO3C029361
SyntenyMELO3C029361
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCGAAACACCCAACTGCAACAATGGAACCTCAAGCTGCAAGGAGGGAGATTTGAAGGGATTTGATGAGAGAGAACACAAAACGAAGGAGAAAAGGGTTTCGCACGAACATCGGTTGAGGGAAAAACCTGAACACAGGTTGAAGACGATAAGGCAGGGGAGGGTTTCGACCGTTTGA

mRNA sequence

ATGGCAAGCGAAACACCCAACTGCAACAATGGAACCTCAAGCTGCAAGGAGGGAGATTTGAAGGGATTTGATGAGAGAGAACACAAAACGAAGGAGAAAAGGGTTTCGCACGAACATCGGTTGAGGGAAAAACCTGAACACAGGTTGAAGACGATAAGGCAGGGGAGGGTTTCGACCGTTTGA

Coding sequence (CDS)

ATGGCAAGCGAAACACCCAACTGCAACAATGGAACCTCAAGCTGCAAGGAGGGAGATTTGAAGGGATTTGATGAGAGAGAACACAAAACGAAGGAGAAAAGGGTTTCGCACGAACATCGGTTGAGGGAAAAACCTGAACACAGGTTGAAGACGATAAGGCAGGGGAGGGTTTCGACCGTTTGA

Protein sequence

MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV
Homology
BLAST of MELO3C029361 vs. NCBI nr
Match: KAA0048342.1 (hypothetical protein E6C27_scaffold264G00570 [Cucumis melo var. makuwa] >TYK01123.1 hypothetical protein E5676_scaffold612G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 4.8e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV
Sbjct: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60

BLAST of MELO3C029361 vs. NCBI nr
Match: TYK26895.1 (hypothetical protein E5676_scaffold7319G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETP+CNNGTSS KEGDL+GFDE E++TKEKRVSHE  LR KPEH LKTIRQGRVSTV
Sbjct: 1  MASETPSCNNGTSSDKEGDLRGFDEGENRTKEKRVSHEQGLRGKPEHGLKTIRQGRVSTV 60

BLAST of MELO3C029361 vs. NCBI nr
Match: KAA0047776.1 (hypothetical protein E6C27_scaffold133G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 90.1 bits (222), Expect = 6.9e-15
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETP+ NNGTSS KEGDL+ FDE EH+TK KRVSHEH LR KPEHRLKTIR GRVS V
Sbjct: 1  MASETPSRNNGTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIRHGRVSIV 60

BLAST of MELO3C029361 vs. NCBI nr
Match: TYK01078.1 (hypothetical protein E5676_scaffold264G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 9.0e-15
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETP+ NNGTSS KEGDL+ FDE EH+TK KRVSHEH LR KPEHRLKTIR GRVS +
Sbjct: 1  MASETPSRNNGTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIRHGRVSII 60

BLAST of MELO3C029361 vs. NCBI nr
Match: TYK28137.1 (hypothetical protein E5676_scaffold289G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 2.0e-14
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETP+ NNGTSS KEGDL+G DEREH+TK KRV HEH LR KPE+ LKTIRQGRVS V
Sbjct: 1  MASETPSRNNGTSSSKEGDLRGLDEREHRTKGKRVLHEHELRGKPENGLKTIRQGRVSAV 60

BLAST of MELO3C029361 vs. ExPASy TrEMBL
Match: A0A5D3BMY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00200 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV
Sbjct: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60

BLAST of MELO3C029361 vs. ExPASy TrEMBL
Match: A0A5D3DUA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold7319G00130 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETP+CNNGTSS KEGDL+GFDE E++TKEKRVSHE  LR KPEH LKTIRQGRVSTV
Sbjct: 1  MASETPSCNNGTSSDKEGDLRGFDEGENRTKEKRVSHEQGLRGKPEHGLKTIRQGRVSTV 60

BLAST of MELO3C029361 vs. ExPASy TrEMBL
Match: A0A5A7U0L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00090 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-15
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETP+ NNGTSS KEGDL+ FDE EH+TK KRVSHEH LR KPEHRLKTIR GRVS V
Sbjct: 1  MASETPSRNNGTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIRHGRVSIV 60

BLAST of MELO3C029361 vs. ExPASy TrEMBL
Match: A0A5D3BPU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00950 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.4e-15
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETP+ NNGTSS KEGDL+ FDE EH+TK KRVSHEH LR KPEHRLKTIR GRVS +
Sbjct: 1  MASETPSRNNGTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIRHGRVSII 60

BLAST of MELO3C029361 vs. ExPASy TrEMBL
Match: A0A5D3C0R8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00590 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.8e-15
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MASETPNCNNGTSSCKEGDLKGFDEREHKTKEKRVSHEHRLREKPEHRLKTIRQGRVSTV 60
          MASETP+ NNGTSS KEGDL+GFD+ EH+TK KRVSHEH LR KPEH LKT RQGRVS V
Sbjct: 1  MASETPSPNNGTSSNKEGDLRGFDDGEHRTKGKRVSHEHGLRGKPEHGLKTTRQGRVSAV 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0048342.14.8e-24100.00hypothetical protein E6C27_scaffold264G00570 [Cucumis melo var. makuwa] >TYK0112... [more]
TYK26895.12.2e-1683.33hypothetical protein E5676_scaffold7319G00130 [Cucumis melo var. makuwa][more]
KAA0047776.16.9e-1580.00hypothetical protein E6C27_scaffold133G00090 [Cucumis melo var. makuwa][more]
TYK01078.19.0e-1578.33hypothetical protein E5676_scaffold264G00950 [Cucumis melo var. makuwa][more]
TYK28137.12.0e-1478.33hypothetical protein E5676_scaffold289G00480 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BMY62.3e-24100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DUA41.0e-1683.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U0L73.4e-1580.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BPU24.4e-1578.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C0R89.8e-1578.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029361.1MELO3C029361.1mRNA