MELO3C029175 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029175
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Kinesin-like protein
Location	chr01: 26680606 .. 26681956 (+)
RNA-Seq Expression	MELO3C029175
Synteny	MELO3C029175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCTTCAAAAGATGGATCCAGAAGATTTAAAAGATGACTCATCTGATGAAGATTATTTTAGGTTTTTTCTAGGATTTCTTTTTTGTCAACTTTATGGAGCTTGGGATATGAAATTTTTGTAGGATAAATCACCAAAGTTTTTATTTTATGAGGTTGGGTTTTGTGTTCTTTTGTAGCTAACTGTTTTTAAAGGGCCATAGAGTTCACCAGTTAAAGTAAGTCCAATATAGAGTCCATACAATGAATTTTTTTTTCCTTTACAGATCTTCAGCACCTAGCAATGACAGTTCTAAAGTTTCCCCATAAAAAACAGAAAAACAAGAATATTAACAAGAAATCATAGGTCAACCATTTGAAGGTCGGTTGGACAATGTAGCATGTAGTTACATTAGCTTTTCTTCCAAATTATGAAAGAACGAACCTGATATTGATGAACTGAAGACAAGTACTGGTCTAAGACGAAGTCACACACTATCTTCAACATCGTTGATTGAAGTGTCGACTGTCAGTGGAGGTCTGATGCTCATGGACATGGCTGGTTCTGAAAATATAAAGCAAGCTGGACAAATTGGATTTGAGGCAAAAAAAATGACCGTAAATTGACCATGCTTCTGCAGGTAACTTCTTTTCTTCTTCTTCTTTACTGGAAACTCGTGCTTATAGTTTAATTAATAATGACCCTGTGGGCATAAGTTTATGTTTAAGTTTCAATTGATATAAACTAGAACAATGTTGGAAAATTTAGGTAGTCTTTTATATAGCAAAGTTGGTTCTCTGAGTATTATTTTGAAGCATGTTTTGTGTAGCTAAATTGGTTCTTTCTTTTCTTATGAGTTCCTTATTATTGCATTGAAACTTACATTTGCAACACTTAATAGACTATGTTTATACTTATGTAGTCAGTGTTTTTATTTCAATTTTTGCATCAATTATTTGTCTTTTATTAAGAACTTTGGTTGAATGAACATTGTCTTATTTTGAAAAATTTATCTATTTGTTTATTAAGAAAGTGAAATCTGTTTGGCATGTATTTAATTAATGAATGTTGACTAAGGTTTATTTTCGACAAATTTACAGGTAGTTGAAGAACTCGTGGACCATGAGATCGATCAAGTACATTTATGCGTCAGTCACACATACGTGTATTACATTTATGCATAATAGTTTGATTACATTTATGCCTCAGATATCGATGTCTTATCCTTGCTGTATGATATTTGATAAGATGTTATATTTTTGTTATGTGATATGGAATAGAATGTTTCTTACTTGTTATGTGATATGGGATAGAATGATTCTTACTTGTTATGTGATGAGATGCTCTTTGCTTGCTGTGTGATCTAG

mRNA sequence

ATGGATTCTCTTCAAAAGATGGATCCAGAAGATTTAAAAGATGACTCATCTGATGAAGATTATTTTAGATCTTCAGCACCTAGCAATGACAGTTCTAAAAACGAACCTGATATTGATGAACTGAAGACAAGTACTGGTCTAAGACGAAGTCACACACTATCTTCAACATCGTTGATTGAAGTGTCGACTGTCAGTGGAGGTCTGATGCTCATGGACATGGCTGGTTCTGAAAATATAAAGCAAGCTGGACAAATTGGATTTGAGGCAAAAAAAATGACCGTAGTTGAAGAACTCGTGGACCATGAGATCGATCAAAATGATTCTTACTTGTTATGTGATGAGATGCTCTTTGCTTGCTGTGTGATCTAG

Coding sequence (CDS)

ATGGATTCTCTTCAAAAGATGGATCCAGAAGATTTAAAAGATGACTCATCTGATGAAGATTATTTTAGATCTTCAGCACCTAGCAATGACAGTTCTAAAAACGAACCTGATATTGATGAACTGAAGACAAGTACTGGTCTAAGACGAAGTCACACACTATCTTCAACATCGTTGATTGAAGTGTCGACTGTCAGTGGAGGTCTGATGCTCATGGACATGGCTGGTTCTGAAAATATAAAGCAAGCTGGACAAATTGGATTTGAGGCAAAAAAAATGACCGTAGTTGAAGAACTCGTGGACCATGAGATCGATCAAAATGATTCTTACTTGTTATGTGATGAGATGCTCTTTGCTTGCTGTGTGATCTAG

Protein sequence

MDSLQKMDPEDLKDDSSDEDYFRSSAPSNDSSKNEPDIDELKTSTGLRRSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMTVVEELVDHEIDQNDSYLLCDEMLFACCVI

Homology

[Close]

BLAST of MELO3C029175 vs. NCBI nr
Match: KAG6664658.1 (hypothetical protein CIPAW_02G109400 [Carya illinoinensis])

HSP 1 Score: 55.1 bits (131), Expect = 5.0e-04
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH L    +++V TV G LML+DMAGSENI+QAGQIGFEAK  T
Sbjct: 132 RSHCL---IILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQT 173

[Close]

BLAST of MELO3C029175 vs. NCBI nr
Match: KAG6726969.1 (hypothetical protein I3842_02G108000 [Carya illinoinensis])

HSP 1 Score: 55.1 bits (131), Expect = 5.0e-04
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH L    +++V TV G LML+DMAGSENI+QAGQIGFEAK  T
Sbjct: 260 RSHCL---IILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQT 301

[Close]

BLAST of MELO3C029175 vs. NCBI nr
Match: KAG2722010.1 (hypothetical protein I3760_02G109500 [Carya illinoinensis])

HSP 1 Score: 55.1 bits (131), Expect = 5.0e-04
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH L    +++V TV G LML+DMAGSENI+QAGQIGFEAK  T
Sbjct: 260 RSHCL---IILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQT 301

[Close]

BLAST of MELO3C029175 vs. NCBI nr
Match: KAG2722011.1 (hypothetical protein I3760_02G109500 [Carya illinoinensis] >KAG7991761.1 hypothetical protein I3843_02G094400 [Carya illinoinensis])

HSP 1 Score: 55.1 bits (131), Expect = 5.0e-04
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49 RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
          RSH L    +++V TV G LML+DMAGSENI+QAGQIGFEAK  T
Sbjct: 43 RSHCL---IILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQT 84

[Close]

BLAST of MELO3C029175 vs. NCBI nr
Match: KAF5202158.1 (Kinesin-like protein kin-10a [Thalictrum thalictroides])

HSP 1 Score: 55.1 bits (131), Expect = 5.0e-04
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH +    ++EV TV G LML+DMAGSENI+QAGQ+GFEAK  T
Sbjct: 270 RSHCM---IILEVPTVGGRLMLVDMAGSENIEQAGQVGFEAKMQT 311

[Close]

BLAST of MELO3C029175 vs. ExPASy Swiss-Prot
Match: Q8VWI7 (Kinesin-like protein KIN-10A OS=Arabidopsis thaliana OX=3702 GN=KIN10A PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.3e-06
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH +    +++V TV G LML+DMAGSENI QAGQ GFEAK  T
Sbjct: 251 RSHCI---IILDVPTVGGRLMLVDMAGSENIDQAGQTGFEAKMQT 292

[Close]

BLAST of MELO3C029175 vs. ExPASy Swiss-Prot
Match: Q6K990 (Kinesin-like protein KIN-10A OS=Oryza sativa subsp. japonica OX=39947 GN=KIN10A PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.2e-05
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH +    +++V +V G LML+DMAGSENI+ AGQ GFEAK  T
Sbjct: 275 RSHCM---IILDVPSVGGRLMLVDMAGSENIEAAGQTGFEAKMQT 316

[Close]

BLAST of MELO3C029175 vs. ExPASy TrEMBL
Match: A0A2G5DPK8 (Kinesin motor domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01700768v1 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH +    ++EV TV G LML+DMAGSENI+QAGQ+GFEAK  T
Sbjct: 270 RSHCM---IILEVPTVGGRLMLVDMAGSENIEQAGQVGFEAKMQT 311

[Close]

BLAST of MELO3C029175 vs. ExPASy TrEMBL
Match: A0A7J6WZY9 (Kinesin-like protein kin-10a OS=Thalictrum thalictroides OX=46969 GN=FRX31_008249 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH +    ++EV TV G LML+DMAGSENI+QAGQ+GFEAK  T
Sbjct: 270 RSHCM---IILEVPTVGGRLMLVDMAGSENIEQAGQVGFEAKMQT 311

[Close]

BLAST of MELO3C029175 vs. ExPASy TrEMBL
Match: A0A5N6RDC5 (Kinesin motor domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_014741 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH L    +++V TV G LML+DMAGSENI+QAGQIGFEAK  T
Sbjct: 257 RSHCL---IILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQT 298

[Close]

BLAST of MELO3C029175 vs. ExPASy TrEMBL
Match: A0A2G9H9U8 (Kinesin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13071 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-04
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH +    +++V TV G LML+DMAGSENI+QAGQIGFEAK  T
Sbjct: 265 RSHCM---IIVDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQT 306

[Close]

BLAST of MELO3C029175 vs. ExPASy TrEMBL
Match: A0A0S3SPT5 (Kinesin motor domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G140900 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-04
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH +    +++V TV G LML+DMAGSENI+QAGQIGFEAK  T
Sbjct: 275 RSHCMQ--VILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQT 317

[Close]

BLAST of MELO3C029175 vs. TAIR 10
Match: AT4G14330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.2e-07
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 49  RSHTLSSTSLIEVSTVSGGLMLMDMAGSENIKQAGQIGFEAKKMT 94
           RSH +    +++V TV G LML+DMAGSENI QAGQ GFEAK  T
Sbjct: 251 RSHCI---IILDVPTVGGRLMLVDMAGSENIDQAGQTGFEAKMQT 292

The following BLAST results are available for this feature:

BLAST of MELO3C029175 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6664658.1	5.0e-04	66.67	hypothetical protein CIPAW_02G109400 [Carya illinoinensis]	[more]
KAG6726969.1	5.0e-04	66.67	hypothetical protein I3842_02G108000 [Carya illinoinensis]	[more]
KAG2722010.1	5.0e-04	66.67	hypothetical protein I3760_02G109500 [Carya illinoinensis]	[more]
KAG2722011.1	5.0e-04	66.67	hypothetical protein I3760_02G109500 [Carya illinoinensis] >KAG7991761.1 hypothe...	[more]
KAF5202158.1	5.0e-04	64.44	Kinesin-like protein kin-10a [Thalictrum thalictroides]	[more]

BLAST of MELO3C029175 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VWI7	7.3e-06	62.22	Kinesin-like protein KIN-10A OS=Arabidopsis thaliana OX=3702 GN=KIN10A PE=1 SV=1	[more]
Q6K990	6.2e-05	57.78	Kinesin-like protein KIN-10A OS=Oryza sativa subsp. japonica OX=39947 GN=KIN10A ...	[more]

BLAST of MELO3C029175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G5DPK8	2.4e-04	64.44	Kinesin motor domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO...	[more]
A0A7J6WZY9	2.4e-04	64.44	Kinesin-like protein kin-10a OS=Thalictrum thalictroides OX=46969 GN=FRX31_00824...	[more]
A0A5N6RDC5	2.4e-04	66.67	Kinesin motor domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_...	[more]
A0A2G9H9U8	3.2e-04	64.44	Kinesin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13071 PE=3...	[more]
A0A0S3SPT5	3.2e-04	64.44	Kinesin motor domain-containing protein OS=Vigna angularis var. angularis OX=157...	[more]

BLAST of MELO3C029175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14330.1	5.2e-07	62.22	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029175.1	MELO3C029175.1	mRNA