MELO3C029154.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C029154.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionE3 ubiquitin-protein ligase COP1
Locationchr01: 25160986 .. 25164847 (-)
RNA-Seq ExpressionMELO3C029154.jh1
SyntenyMELO3C029154.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGCTACTTCACTGGTTTCTTCCTATTTATTTTTTCATTTTCTGCAATTTTGTAGGGTTTTCGAATTTGGTGGTATTGGAGTTGGGTATTGGAGGTGTTGACCCAAATTGTTCTCTTCTCTCAACCCATTTTTAAAAGTTGCTCAACCTTAGGTGAAGAGGTATGTGTATTTTGACTTTCTATCCTTTGGTAAATTGTTTTTTCCTAATCATTTATCATCATGATTATGATATTGTAAGATTTTTCTTCAATCTATGTTGCATTTCCTTGTTGCATATGTGTAATTCGTAATTGAAAGATGACCTTGGATTGGGTTGTGTATTTTTATTTCTTGAGTATTATTTTCATTATTTTTTGGTTTACACTGCTAACAAGCACCTTCGCCTATATGTCTTCCACTAAAATTTGGAAAACAGAGAATGGAAAAAAAATTAGAAGAAAGTAATATAGAAAATTTTATACGCCCATTATTGATTAAAGAAAAGAGAAAGAATAACTTCCTACAGAACAACTAAGTGAGCACCATCTGAGACAACAATTTATGTTTTCTTTGCCCTTTATCCTTTTCTTTTAAGTGGGATTCCGTGGTTTTCTCTTAACTCTACTGCTACGGTTGGTGTTTCAGCAAAGTAGTTTCTTGTAAACTAAGTTTTTTTTTTTTGGAATAACGTTGTAACCTTGTGTTCTTTGTATCCTTGCAAAAAGTTCTCGAAATTTGAACTAAAGCTAACATTTTTCTTTTTATTTGGAGTAACTGTTCATATGCAAACTTAGTGCAGAAAAACGTTATTCCAAACTTAGTACAGAAAATGTTTTTCAAGAAGTAATATATATTTTCTCTTCCAATTTACTTTTTAGCTTTAGGGATTGCATAGCTCACCATCCAAAGAATTTTGCTTCATTCCTTTGTTTAGTTGCAGCTGGGATAGTTTTCTCATGTTTCTACATTCTAAAATGGAATCCAGATCTCTTTCAAACCTATTTTTTCATCTTTGAATCTCTAGCATTTTAGTACAATGCTTTGTTTGTTTCATTGTTGTCTCTTCCTTCATCTACATAGATTGACGTTTAGGGTTTTTCAAAGCCATTCTAAAGTAAACAAGTTCATTGGATTCAAAAGCATATATTCATCAATGTTTGGCATTCAAGAAAATTGGGGACTCTGCTGTGTGTGATATTTGCTGAAATAGCATTCTGGGCAATAATAGCTGGGATTTTTTATTTGATTACGAATGAGTATAAATTGTTACAAACAATGGAGAACTGGTAAGCTTTCTTTTCATTTGTTATGTTTTGAAGATATGAATGAAGGCTACATAAAGTCTTTCCATTATTCTTTCTTGTGGTGGGTGGTCCTCCAAGTTATTTATATGTTAGAAATTTTGTTTTAGTTTAAGAAAAAATTATAGAACTTATATGTTCATCTTGAATTAGGACAAAATAGTAAGTTTTTTTAAAATTTTATTTTACTGTGAGGTGGTTGGTGGGTTAGACACTGCCTTTATCTTTATCATATGTCTGTTTTTTTTTTTTTTCTTTCTAATCACCGATTTAATGATTTTGAAGATGATAGATTAACATAAACTTATATGTAGGTTGTAAGTATATTATTCATGATCGGGAGATGAAGGAGAGATATGTTTAATGAATGCCCCTACAAAATTTTTGTGTAACTTACTAGGACGTTGATTCAACCACCCACCACTTGAAGATCAGAGCATACTTGGTTCAAGCACAATGAAACATGGACGGGTGGATTATAAATTCTTTTTTAGAATCTACAACGGTATTTAGGCCTTTCACAATTAGATTATGGATTGTTATTTATATAATTTTTTGGTAAGTTTATCGAGTACGTAATCTATAACTGAATTGTGTGATATTTATTTTATTAGTTTAAGTTGTTTACAATTAGCTTTTCTTTTCTATGTTTTTTGGATTGTACTTAGGTGGAATAAAATGCTTGGATTCTCTTGTGATTTTTAAAGTAAAGGTTATATATTTTGTTTTATTGAATTTGATTATGAAATAGATTATATTTAGTGTTTCTCGTTATTTTGACCTTCTATTTGGTCTTTATTTAATTTTTGCTACTTTAATATAACCGTCCATTCATACCTATTTATTAGAATTTCTATTCCTCATTTTCAAATTCCTCCATATTGGTTAGCTTGTTCAATTATTTTATGTCATCCAATGATCCAACTTGGGAATTGAAGGTTTTTGCTCCTTGTGTCAAATTTCAAGTTAATCATGTTGCCTGAAATCGTAATTTATATATGTAATTTCTGAGCAAACTAGGAAGACAATTGTCAAGCAAAGCATTAGTTCGTACTAGAAGTTGCCAGTGGACTGAGTCTTTATCTTCTGAAACTAGTTTAGATGTATGTTTATTAACTTTTGAAACCAATAGCTGTAATCAGATTTTACAAAGTTTATTCTTTGGTTTAGTTTGCTGTTAAATGTAAAAGGTTTAGAACTAATATCTAAAGGCTTGAGTTATTGATCATGAATTTTATATGGGATTCTTTCCTTTAAAAAGTTTACTTTGTCATGTTTGCAGGTGAAAATCCAGTGCTTAGATCCAATATCAAAAGTATAAGGTCTGTATGATGGGATGGTTTTGTTTTTTTTCGTAAATATTTGATTATATGTTTGTTTGGGCTTTAAAATTATTGAACCATTTCAGGAGTGGAGAATTTAAACATATAGATTCTCTAAAACATCATGTTGGTGGGGATCCTCATGTTTACAGTGCTGGCGTAAGTATCGATTCACAATTCGTATGAACATGTCTTGGATTGCTTTTAAGCCATGTGAGCAGAGGCTAGAATCACATCCTCTAATTATAATAAATCACCATGAGATGATAGTTACATTATACTTAACCATGAATTTGTTTTCATCTGTGTACACTTATCTACGTATTTTTCTCCTACACTATTTTTTCTTTTTATTATCTTTGTGGATCCCCTTAAAGATATAAAAGGAAGTATCAAGTGAACATCCATAGTTGTTGGCATCTTTTAGCTAGTTAAAATACATGACTCGTACACTTCCTCTTTGAGAATGCTTTTTAATCTTGTTTTGCTGGCTTCATAGTTGGTATGTAGTTTGTATTGTTGTACTTTTCTTCAACCTAACATTATTTTTTGAATTTCTTTTCGATTTATTATTACAAATAATGGATTGGGACATGATGTTGCAGGCTTGAGGTGAGGACGTATTTAATTCAATCAACGAAAGGTGCTTGTTAAGTAATTTTATAGTGTTATGGAGTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCCTCCATGCTTGTATCAAGCAGTGATGACTTTAAGGTATTTGACTGAAGCACACACTATCTTAAGTTGGCGAAGATCGATTATTGATTTAAAAATAGATTTGTGATTGATCTAATTTCTCATTGCAATTTTTTTCATCTTTTTCAATGGTTAGATTTGTAGCAGAGGATATTTGCTGACTTGTCAACTGTGGCACTTGGAAAATGCTATCCTTTATTGAGTTTTATCTGTAAATTAGGCAATATAATTTTGGATCCATGCTGAAATTGTTACTACCACATGATTTTTAGAAATTATCCAGACAATTATGTATTACTCAAGTCTGGGTCAAAGGGTTAATAATTTGTCAGTTGTTGGTGGCTTTTTCTTAAACAAGTTCTTCTCCTGCTTACTAACTTCAAAGTTACAACATTCAGTTCTTTCCATTATGTTTTTTCTAATACTATTCTCAGTTACATTGCTCCTTTTATTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGCTGACTTCAAATTGA

mRNA sequence

ATGGGTTGCTACTTCACTGGGTTTTCGAATTTGGTGGTATTGGAGTTGGGTATTGGAGGTGAAAATCCAGTGCTTAGATCCAATATCAAAAGTATAAGATTTATTATTACAAATAATGGATTGGGACATGATGTTGCAGGCTTGAGTGTTATGGAGTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCCTCCATGCTTGTATCAAGCAGTGATGACTTTAAGTTACATTGCTCCTTTTATTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGCTGACTTCAAATTGA

Coding sequence (CDS)

ATGGGTTGCTACTTCACTGGGTTTTCGAATTTGGTGGTATTGGAGTTGGGTATTGGAGGTGAAAATCCAGTGCTTAGATCCAATATCAAAAGTATAAGATTTATTATTACAAATAATGGATTGGGACATGATGTTGCAGGCTTGAGTGTTATGGAGTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCCTCCATGCTTGTATCAAGCAGTGATGACTTTAAGTTACATTGCTCCTTTTATTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGCTGACTTCAAATTGA

Protein sequence

MGCYFTGFSNLVVLELGIGGENPVLRSNIKSIRFIITNNGLGHDVAGLSVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKLHCSFYFNRSKFGAQDIRKLLTSN
Homology
[Close]
BLAST of MELO3C029154.jh1 vs. NCBI nr
Match: KAE8785726.1 (E3 ubiquitin-protein ligase COP1 [Hordeum vulgare])

HSP 1 Score: 65.1 bits (157), Expect = 6.00e-11
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 49 SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKLHCS 85
          SVMEYEEHEKRAWSVDFSR+EP MLVS SDD K+  S
Sbjct: 39 SVMEYEEHEKRAWSVDFSRTEPKMLVSGSDDCKVETS 75

[Close]
BLAST of MELO3C029154.jh1 vs. NCBI nr
Match: THU69712.1 (hypothetical protein C4D60_Mb08t17270 [Musa balbisiana])

HSP 1 Score: 68.9 bits (167), Expect = 6.33e-11
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0 

Query: 10  NLVVLELGIGGENPVLRSNIKSIRFIITNNGLGHDVAGLSVMEYEEHEKRAWSVDFSRSE 69
           N  V+EL    +   L  N  S   I +++  G      SVMEYEEHEKRAWSVDFSR+E
Sbjct: 441 NCPVVELATQSKLSCLSWNKYSKNVIASSDYEGIVTVWDSVMEYEEHEKRAWSVDFSRTE 500

Query: 70  PSMLVSSSDDFKL 82
           PSMLVS SDD K+
Sbjct: 501 PSMLVSGSDDCKV 513

[Close]
BLAST of MELO3C029154.jh1 vs. NCBI nr
Match: KAG8072564.1 (hypothetical protein GUJ93_ZPchr0006g41992 [Zizania palustris])

HSP 1 Score: 68.6 bits (166), Expect = 8.27e-11
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 49  SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKLHCSFY 87
           SVMEYEEHEKRAWSVDFSR+EPSMLVS SDD K+   FY
Sbjct: 460 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVLMPFY 498

[Close]
BLAST of MELO3C029154.jh1 vs. NCBI nr
Match: AEB35962.1 (COP1, partial [Helianthus annuus])

HSP 1 Score: 63.5 bits (153), Expect = 1.63e-10
Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 49 SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKLHCSFYFNRSKFGAQDI 98
          SVMEYEEHEKR WSVDFSR EPSMLVS SDD K+    ++ R +  A +I
Sbjct: 44 SVMEYEEHEKRVWSVDFSRVEPSMLVSGSDDCKV--KIWYTRQESSAINI 91

[Close]
BLAST of MELO3C029154.jh1 vs. NCBI nr
Match: KAB1222087.1 (E3 ubiquitin-protein ligase COP1 [Morella rubra])

HSP 1 Score: 67.4 bits (163), Expect = 1.93e-10
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 0 

Query: 49  SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 82
           SVMEYEEHEKRAWSVDFSR+EPSMLVS SDD+K+
Sbjct: 170 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDYKV 203

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-09
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 49  SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 83
           S+MEYEEHEKRAWSVDFSR+EPSMLVS SDD K+
Sbjct: 455 SLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 488

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 49  SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 83
           S+MEYEEHEKRAWSVDFSR++PSMLVS SDD K+
Sbjct: 452 SLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKV 485

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy Swiss-Prot
Match: Q9SYX2 (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.0e-04
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 0 

Query: 47  GLSVMEYEEHEKRAWSVDFSRSEPSMLVSSSDD 80
           G    +Y EH+KRAWSVDFS S+P+  VS SDD
Sbjct: 798 GQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDD 830

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy Swiss-Prot
Match: Q8NHY2 (E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 5.9e-04
Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 0 

Query: 53  YEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 83
           Y+EHEKR WSVDF+  +P +L S SDD K+
Sbjct: 509 YQEHEKRCWSVDFNLMDPKLLASGSDDAKV 538

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy Swiss-Prot
Match: Q9R1A8 (E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 5.9e-04
Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 0 

Query: 53  YEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 83
           Y+EHEKR WSVDF+  +P +L S SDD K+
Sbjct: 511 YQEHEKRCWSVDFNLMDPKLLASGSDDAKV 540

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy TrEMBL
Match: A0A5K0WFF8 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS2744 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.47e-12
Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 49 SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFK 81
          S+MEYEEHEKRAWSVDFSR+EPSMLVS SDD K
Sbjct: 1  SIMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCK 33

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy TrEMBL
Match: A0A4S8K4F9 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb08t17270 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.06e-11
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0 

Query: 10  NLVVLELGIGGENPVLRSNIKSIRFIITNNGLGHDVAGLSVMEYEEHEKRAWSVDFSRSE 69
           N  V+EL    +   L  N  S   I +++  G      SVMEYEEHEKRAWSVDFSR+E
Sbjct: 441 NCPVVELATQSKLSCLSWNKYSKNVIASSDYEGIVTVWDSVMEYEEHEKRAWSVDFSRTE 500

Query: 70  PSMLVSSSDDFKL 82
           PSMLVS SDD K+
Sbjct: 501 PSMLVSGSDDCKV 513

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy TrEMBL
Match: A0A2P2KZ19 (Ubiquitin ligase protein cop1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.02e-11
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0 

Query: 49  SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 82
           SVMEYEEHEKRAWSVDFSR+EPSMLVS SDDFK+
Sbjct: 311 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDFKV 344

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy TrEMBL
Match: A0A2P2KYZ1 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.07e-11
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0 

Query: 49  SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 82
           SVMEYEEHEKRAWSVDFSR+EPSMLVS SDDFK+
Sbjct: 462 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDFKV 495

[Close]
BLAST of MELO3C029154.jh1 vs. ExPASy TrEMBL
Match: A0A2P2KZ01 (Ubiquitin ligase protein cop1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.12e-11
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0 

Query: 49  SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 82
           SVMEYEEHEKRAWSVDFSR+EPSMLVS SDDFK+
Sbjct: 462 SVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDFKV 495

[Close]
BLAST of MELO3C029154.jh1 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 49  SVMEYEEHEKRAWSVDFSRSEPSMLVSSSDDFKL 83
           S+MEYEEHEKRAWSVDFSR+EPSMLVS SDD K+
Sbjct: 455 SLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV 488

[Close]
BLAST of MELO3C029154.jh1 vs. TAIR 10
Match: AT2G46340.1 (SPA (suppressor of phyA-105) protein family )

HSP 1 Score: 46.6 bits (109), Expect = 1.4e-05
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 0 

Query: 47  GLSVMEYEEHEKRAWSVDFSRSEPSMLVSSSDD 80
           G    +Y EH+KRAWSVDFS S+P+  VS SDD
Sbjct: 798 GQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDD 830

[Close]
BLAST of MELO3C029154.jh1 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 44.3 bits (103), Expect = 7.1e-05
Identity = 17/30 (56.67%), Postives = 24/30 (80.00%), Query Frame = 0 

Query: 50  VMEYEEHEKRAWSVDFSRSEPSMLVSSSDD 80
           V E +EHEKR WS+D+S ++P++L S SDD
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDD 598

[Close]
BLAST of MELO3C029154.jh1 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 )

HSP 1 Score: 44.3 bits (103), Expect = 7.1e-05
Identity = 17/30 (56.67%), Postives = 24/30 (80.00%), Query Frame = 0 

Query: 50  VMEYEEHEKRAWSVDFSRSEPSMLVSSSDD 80
           V E +EHEKR WS+D+S ++P++L S SDD
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDD 598

[Close]
BLAST of MELO3C029154.jh1 vs. TAIR 10
Match: AT4G11110.1 (SPA1-related 2 )

HSP 1 Score: 43.9 bits (102), Expect = 9.3e-05
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 0 

Query: 47  GLSVMEYEEHEKRAWSVDFSRSEPSMLVSSSDD 80
           G ++  + EHEKRAWSVDFS + P+ L S SDD
Sbjct: 805 GQAISHFIEHEKRAWSVDFSEACPTKLASGSDD 837

The following BLAST results are available for this feature:
BLAST of MELO3C029154.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8785726.16.00e-1181.08E3 ubiquitin-protein ligase COP1 [Hordeum vulgare][more]
THU69712.16.33e-1153.42hypothetical protein C4D60_Mb08t17270 [Musa balbisiana][more]
KAG8072564.18.27e-1182.05hypothetical protein GUJ93_ZPchr0006g41992 [Zizania palustris][more]
AEB35962.11.63e-1064.00COP1, partial [Helianthus annuus][more]
KAB1222087.11.93e-1088.24E3 ubiquitin-protein ligase COP1 [Morella rubra][more]
BLAST of MELO3C029154.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P432541.6e-0985.29E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV... [more]
P934713.5e-0982.35E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1[more]
Q9SYX22.0e-0460.61Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV... [more]
Q8NHY25.9e-0460.00E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1[more]
Q9R1A85.9e-0460.00E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2[more]
BLAST of MELO3C029154.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5K0WFF86.47e-1287.88Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS27... [more]
A0A4S8K4F93.06e-1153.42Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb08t17270 PE=4 SV=... [more]
A0A2P2KZ194.02e-1191.18Ubiquitin ligase protein cop1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A2P2KYZ14.07e-1191.18Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A2P2KZ014.12e-1191.18Ubiquitin ligase protein cop1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
BLAST of MELO3C029154.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G32950.11.1e-1085.29Transducin/WD40 repeat-like superfamily protein [more]
AT2G46340.11.4e-0560.61SPA (suppressor of phyA-105) protein family [more]
AT1G53090.17.1e-0556.67SPA1-related 4 [more]
AT1G53090.27.1e-0556.67SPA1-related 4 [more]
AT4G11110.19.3e-0557.58SPA1-related 2 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 42..85
e-value: 1.7E-8
score: 35.7
IPR042755E3 ubiquitin-protein ligase COP1PANTHERPTHR44080E3 UBIQUITIN-PROTEIN LIGASE COP1coord: 46..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029154.jh1.t1MELO3C029154.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0061630 ubiquitin protein ligase activity