MELO3C029137 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029137
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	DNA mismatch repair protein MSH3
Location	chr01: 23943681 .. 23944844 (+)
RNA-Seq Expression	MELO3C029137
Synteny	MELO3C029137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGCCATCCACCCCTCGCAGATGTCCGCCATCCACCGCACGCATATCCATCGTCTCCCCTCAAAGCGATTTCTGCCATTGTTAAAGGAATCGCACCGCAGACAATTTTCGGCCCACGTCTTCTTCCTCCAAAGTGTCGTTAAAGCTGTCATTCTCGGAATCGATTTTCGACCTTTGATTTCCGGCCGTAGACGCTTCAGCCTCTGATTTCTGATTTTGACGTTGCTCTTTTGGACGTTGCTCCATTTGGAGATTGCTCCAATTCCCCTTCATCAGAGTTTTTTTCCCTTTTCTTCATTTGGACGTTGCTCCAATTCCTTCCGGTGAGTTCATTTTCTTCAATTTCTTTTCCTTTTGTTTTCGCTTCCTTGGCTATTACTGTATGTATGTAATATATCTGGTGTTTGATTTCTAGGTTATTCCTACAATTCACTTTTTTAGGGATTGTTTTCCACTTCTTTGGGGTTTGGATTGATTATTTCTCAAATATAGTTTGGGTTTAAGGATTGTTGAGCAAACTGGTGATTGCATTATTGAAGTTAAAGAGTTTAGGTAGAATAGAAAATGGAAAAAAGGAGAGTTGTTCAGAATGAATTTGATGGAAGGATGAAGAGAGGGATTGTAAGTCTTTACATAAACTAAAAGCTGATACAGAAAAGAAAAAAGGTTAAAAAGAATATGAAAAATTTGGTAACTTTAACAAGAGAGATAATGGTTTCACAATCCGGATTGAGCTTCCTAGTCATTGCCTCTTTTGATCTTAAATAGTAAACAAACACAATTCCATTGTATATAATCATTAAAACAGTTGATATTATTGCTAAACCTAAAAAACATCAAGTTAGAAATAGCACATACCCACTCTCCTTCACACTAAGGTTGGTTAGTGAAGGGTATAAGGTAGGTGTTGTCAAGCAAACTGAAACTGCTACGATAAAGGCTGATGGGTCGAATAAGTTAGGCCCGTTTTATAAGGGATTGTCGGCTTTTTATACTAAAGCAACCTTGGAGGCAGCACAGGATTTAGGGGGAGCTGAAGAGGGATGTTCTGGAGGGAGTAATTACTTGTTCTGTTTGGTTGAAAATAGTATGTTGGTGGATAACTTGGACTGTAGAATCGAAAATGGGGTTGATGTGAAAATTGGGATGGTTATAAAATAA

mRNA sequence

ATGTTCGCCATCCACCCCTCGCAGATGTCCGCCATCCACCGCACGCATATCCATCGTCTCCCCTCAAAGCGATTTCTGCCATTGTTAAAGGAATCGCACCGCAGACAATTTTCGGCCCACGTCTTCTTCCTCCAAAGTGTCGTTAAAGCTACGCTTCAGCCTCTGATTTCTGATTTTGACGTTGCTCTTTTGGACGTTGCTCCATTTGGAGATTGCTCCAATTCCCCTTCATCAGAGTTTTTTTCCCTTTTCTTCATTTGGACGTTGCTCCAATTCCTTCCGGATGAAGAGAGGGATTGTAAGTCTTTACATAAACTAAAAGCTGATACAGAAAAGAAAAAAGTTGATATTATTGCTAAACCTAAAAAACATCAAGTTAGAAATAGCACATACCCACTCTCCTTCACACTAAGGTTGGTTAGTGAAGGGTATAAGGTAGGTGTTGTCAAGCAAACTGAAACTGCTACGATAAAGGCTGATGGGTCGAATAAGTTAGGCCCGTTTTATAAGGGATTGTCGGCTTTTTATACTAAAGCAACCTTGGAGGCAGCACAGGATTTAGGGGGAGCTGAAGAGGGATGTTCTGGAGGGAGTAATTACTTGTTCTGTTTGGTTGAAAATAGTATGTTGGTGGATAACTTGGACTGTAGAATCGAAAATGGGGTTGATGTGAAAATTGGGATGGTTATAAAATAA

Coding sequence (CDS)

ATGTTCGCCATCCACCCCTCGCAGATGTCCGCCATCCACCGCACGCATATCCATCGTCTCCCCTCAAAGCGATTTCTGCCATTGTTAAAGGAATCGCACCGCAGACAATTTTCGGCCCACGTCTTCTTCCTCCAAAGTGTCGTTAAAGCTACGCTTCAGCCTCTGATTTCTGATTTTGACGTTGCTCTTTTGGACGTTGCTCCATTTGGAGATTGCTCCAATTCCCCTTCATCAGAGTTTTTTTCCCTTTTCTTCATTTGGACGTTGCTCCAATTCCTTCCGGATGAAGAGAGGGATTGTAAGTCTTTACATAAACTAAAAGCTGATACAGAAAAGAAAAAAGTTGATATTATTGCTAAACCTAAAAAACATCAAGTTAGAAATAGCACATACCCACTCTCCTTCACACTAAGGTTGGTTAGTGAAGGGTATAAGGTAGGTGTTGTCAAGCAAACTGAAACTGCTACGATAAAGGCTGATGGGTCGAATAAGTTAGGCCCGTTTTATAAGGGATTGTCGGCTTTTTATACTAAAGCAACCTTGGAGGCAGCACAGGATTTAGGGGGAGCTGAAGAGGGATGTTCTGGAGGGAGTAATTACTTGTTCTGTTTGGTTGAAAATAGTATGTTGGTGGATAACTTGGACTGTAGAATCGAAAATGGGGTTGATGTGAAAATTGGGATGGTTATAAAATAA

Protein sequence

MFAIHPSQMSAIHRTHIHRLPSKRFLPLLKESHRRQFSAHVFFLQSVVKATLQPLISDFDVALLDVAPFGDCSNSPSSEFFSLFFIWTLLQFLPDEERDCKSLHKLKADTEKKKVDIIAKPKKHQVRNSTYPLSFTLRLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGGSNYLFCLVENSMLVDNLDCRIENGVDVKIGMVIK

Homology

[Close]

BLAST of MELO3C029137 vs. NCBI nr
Match: KAA0033635.1 (DNA mismatch repair protein MSH3 [Cucumis melo var. makuwa] >TYK22934.1 DNA mismatch repair protein MSH3 [Cucumis melo var. makuwa])

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-37
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQDLGGAEEGC+G 
Sbjct: 197 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEEGCAGE 256

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFCLVENSMLVDNLDCRIENGVDVKIG+V
Sbjct: 257 SNYLFCLVENSMLVDNLDCRIENGVDVKIGIV 288

[Close]

BLAST of MELO3C029137 vs. NCBI nr
Match: XP_008439212.2 (PREDICTED: DNA mismatch repair protein MSH3 [Cucumis melo])

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-37
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQDLGGAEEGC+G 
Sbjct: 275 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEEGCAGE 334

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFCLVENSMLVDNLDCRIENGVDVKIG+V
Sbjct: 335 SNYLFCLVENSMLVDNLDCRIENGVDVKIGIV 366

[Close]

BLAST of MELO3C029137 vs. NCBI nr
Match: XP_004140847.3 (DNA mismatch repair protein MSH3 isoform X1 [Cucumis sativus] >XP_031737696.1 DNA mismatch repair protein MSH3 isoform X2 [Cucumis sativus] >KAE8650455.1 hypothetical protein Csa_011768 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-36
Identity = 81/92 (88.04%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQDLGGAEEGC+G 
Sbjct: 202 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEEGCAGE 261

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFCLVENSM V N+DCRIENGVDVKIGMV
Sbjct: 262 SNYLFCLVENSMSVQNVDCRIENGVDVKIGMV 293

[Close]

BLAST of MELO3C029137 vs. NCBI nr
Match: XP_031737697.1 (DNA mismatch repair protein MSH3 isoform X3 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-36
Identity = 81/92 (88.04%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQDLGGAEEGC+G 
Sbjct: 202 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEEGCAGE 261

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFCLVENSM V N+DCRIENGVDVKIGMV
Sbjct: 262 SNYLFCLVENSMSVQNVDCRIENGVDVKIGMV 293

[Close]

BLAST of MELO3C029137 vs. NCBI nr
Match: XP_038890123.1 (DNA mismatch repair protein MSH3 [Benincasa hispida])

HSP 1 Score: 159.1 bits (401), Expect = 4.7e-35
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGV+KQTETA IKA GSNKLGPF +GLSA YTKATLEAAQ+LGGAEEGC G 
Sbjct: 193 RLVSAGYKVGVIKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGGAEEGCGGE 252

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFC+VENSMLV NL+CRIENGVDVKIG V
Sbjct: 253 SNYLFCVVENSMLVGNLECRIENGVDVKIGTV 284

[Close]

BLAST of MELO3C029137 vs. ExPASy Swiss-Prot
Match: O65607 (DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana OX=3702 GN=MSH3 PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 130 TYPLSFTL-RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLG 189
           T+ L+F + RLV+ GYK+GVVKQTETA IK+ G+N+ GPF++GLSA YTKATLEAA+D+ 
Sbjct: 162 TFRLNFHVRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDIS 221

Query: 190 ---GAEEGCSGGSNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
              G EEG    SN+L C+V+  +  + L C IE   DV++G+V
Sbjct: 222 GGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVV 265

[Close]

BLAST of MELO3C029137 vs. ExPASy Swiss-Prot
Match: A2R1F6 (DNA mismatch repair protein msh3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=msh3 PE=3 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKAT-LEAAQDLGGAEEGCSG 197
           RLV+ G+KVGVV+Q ETA +KA G N+  PF + L+  YTK T ++ A+ LGG     SG
Sbjct: 288 RLVAAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTNLYTKGTYIDDAEGLGGPMPAASG 347

Query: 198 GSN----YLFCLVENSMLVDNLDCRIENGV 223
           G++    YL C+ E +      D +++ G+
Sbjct: 348 GASPATGYLLCITETNAKGWGNDEKVQVGI 377

[Close]

BLAST of MELO3C029137 vs. ExPASy Swiss-Prot
Match: B0YCF6 (DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=msh3 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.4e-10
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKAT-LEAAQDLGGAEEGCSG 197
           RLVS GYKVGVV+Q ETA +KA G N+  PF + L+  YTK T ++  + L GA    SG
Sbjct: 290 RLVSAGYKVGVVRQLETAALKAAGDNRNAPFSRKLTNLYTKGTYVDDVEGLDGATPAASG 349

Query: 198 GSN----YLFCLVENS 209
           G++    Y+ C+ E +
Sbjct: 350 GASPATGYMLCITETN 365

[Close]

BLAST of MELO3C029137 vs. ExPASy Swiss-Prot
Match: Q4WGB7 (DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=msh3 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.4e-10
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKAT-LEAAQDLGGAEEGCSG 197
           RLVS GYKVGVV+Q ETA +KA G N+  PF + L+  YTK T ++  + L GA    SG
Sbjct: 290 RLVSAGYKVGVVRQLETAALKAAGDNRNAPFSRKLTNLYTKGTYVDDVEGLDGATPAASG 349

Query: 198 GSN----YLFCLVENS 209
           G++    Y+ C+ E +
Sbjct: 350 GASPATGYMLCITETN 365

[Close]

BLAST of MELO3C029137 vs. ExPASy Swiss-Prot
Match: A1DCB2 (DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=msh3 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKAT-LEAAQDLGGAEEGCSG 197
           RLVS GYKVGVV+Q ETA +KA G N+  PF + L+  YTK T ++  + L GA    SG
Sbjct: 284 RLVSAGYKVGVVRQLETAALKAVGDNRNAPFSRKLTNLYTKGTYVDDVEGLDGATPAASG 343

Query: 198 GSN----YLFCLVENS 209
           G++    Y+ C+ E +
Sbjct: 344 GASPATGYMLCITETN 359

[Close]

BLAST of MELO3C029137 vs. ExPASy TrEMBL
Match: A0A5A7SWU6 (DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00120 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.9e-38
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQDLGGAEEGC+G 
Sbjct: 197 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEEGCAGE 256

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFCLVENSMLVDNLDCRIENGVDVKIG+V
Sbjct: 257 SNYLFCLVENSMLVDNLDCRIENGVDVKIGIV 288

[Close]

BLAST of MELO3C029137 vs. ExPASy TrEMBL
Match: A0A1S3AXV2 (DNA mismatch repair protein MSH3 OS=Cucumis melo OX=3656 GN=LOC103484070 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.9e-38
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQDLGGAEEGC+G 
Sbjct: 275 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEEGCAGE 334

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFCLVENSMLVDNLDCRIENGVDVKIG+V
Sbjct: 335 SNYLFCLVENSMLVDNLDCRIENGVDVKIGIV 366

[Close]

BLAST of MELO3C029137 vs. ExPASy TrEMBL
Match: A0A0A0L5V6 (DNA mismatch repair protein OS=Cucumis sativus OX=3659 GN=Csa_3G182010 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 9.2e-37
Identity = 81/92 (88.04%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQDLGGAEEGC+G 
Sbjct: 198 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEEGCAGE 257

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFCLVENSM V N+DCRIENGVDVKIGMV
Sbjct: 258 SNYLFCLVENSMSVQNVDCRIENGVDVKIGMV 289

[Close]

BLAST of MELO3C029137 vs. ExPASy TrEMBL
Match: A0A6J1CI92 (DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111011425 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.3e-35
Identity = 78/92 (84.78%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQ+LGG EEGC G 
Sbjct: 197 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGGGEEGCGGE 256

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFC+VE  MLV+NLDCRIENGVDVKIGMV
Sbjct: 257 SNYLFCVVEKGMLVENLDCRIENGVDVKIGMV 288

[Close]

BLAST of MELO3C029137 vs. ExPASy TrEMBL
Match: A0A6J1CHA4 (DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111011425 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.3e-35
Identity = 78/92 (84.78%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 138 RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLGGAEEGCSGG 197
           RLVS GYKVGVVKQTETA IKA GSNKLGPF +GLSA YTKATLEAAQ+LGG EEGC G 
Sbjct: 197 RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGGGEEGCGGE 256

Query: 198 SNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
           SNYLFC+VE  MLV+NLDCRIENGVDVKIGMV
Sbjct: 257 SNYLFCVVEKGMLVENLDCRIENGVDVKIGMV 288

[Close]

BLAST of MELO3C029137 vs. TAIR 10
Match: AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-24
Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 130 TYPLSFTL-RLVSEGYKVGVVKQTETATIKADGSNKLGPFYKGLSAFYTKATLEAAQDLG 189
           T+ L+F + RLV+ GYK+GVVKQTETA IK+ G+N+ GPF++GLSA YTKATLEAA+D+ 
Sbjct: 162 TFRLNFHVRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDIS 221

Query: 190 ---GAEEGCSGGSNYLFCLVENSMLVDNLDCRIENGVDVKIGMV 230
              G EEG    SN+L C+V+  +  + L C IE   DV++G+V
Sbjct: 222 GGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVV 265

The following BLAST results are available for this feature:

BLAST of MELO3C029137 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033635.1	1.0e-37	90.22	DNA mismatch repair protein MSH3 [Cucumis melo var. makuwa] >TYK22934.1 DNA mism...	[more]
XP_008439212.2	1.0e-37	90.22	PREDICTED: DNA mismatch repair protein MSH3 [Cucumis melo]	[more]
XP_004140847.3	1.9e-36	88.04	DNA mismatch repair protein MSH3 isoform X1 [Cucumis sativus] >XP_031737696.1 DN...	[more]
XP_031737697.1	1.9e-36	88.04	DNA mismatch repair protein MSH3 isoform X3 [Cucumis sativus]	[more]
XP_038890123.1	4.7e-35	84.78	DNA mismatch repair protein MSH3 [Benincasa hispida]	[more]

BLAST of MELO3C029137 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65607	1.5e-23	53.85	DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana OX=3702 GN=MSH3 PE=1 SV...	[more]
A2R1F6	1.9e-10	41.11	DNA mismatch repair protein msh3 OS=Aspergillus niger (strain CBS 513.88 / FGSC ...	[more]
B0YCF6	5.4e-10	46.05	DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain CEA10 / CBS 144...	[more]
Q4WGB7	5.4e-10	46.05	DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain ATCC MYA-4609 /...	[more]
A1DCB2	7.1e-10	46.05	DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM...	[more]

BLAST of MELO3C029137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SWU6	4.9e-38	90.22	DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AXV2	4.9e-38	90.22	DNA mismatch repair protein MSH3 OS=Cucumis melo OX=3656 GN=LOC103484070 PE=4 SV...	[more]
A0A0A0L5V6	9.2e-37	88.04	DNA mismatch repair protein OS=Cucumis sativus OX=3659 GN=Csa_3G182010 PE=3 SV=1	[more]
A0A6J1CI92	2.3e-35	84.78	DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111011425 PE=3 ...	[more]
A0A6J1CHA4	2.3e-35	84.78	DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111011425 PE=3 ...	[more]

BLAST of MELO3C029137 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25540.1	1.0e-24	53.85	homolog of DNA mismatch repair protein MSH3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007695	DNA mismatch repair protein MutS-like, N-terminal	PFAM	PF01624	MutS_I	coord: 135..182 e-value: 3.1E-4 score: 21.0
IPR016151	DNA mismatch repair protein MutS, N-terminal	GENE3D	3.40.1170.10	DNA repair protein MutS, domain I	coord: 104..191 e-value: 1.8E-7 score: 32.8
None	No IPR available	PANTHER	PTHR11361:SF122	DNA MISMATCH REPAIR PROTEIN MSH3	coord: 136..229
IPR045076	DNA mismatch repair MutS family	PANTHER	PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	coord: 136..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029137.1	MELO3C029137.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006298	mismatch repair
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030983	mismatched DNA binding