MELO3C029135 (gene) Melon (DHL92) v4

Overview
NameMELO3C029135
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionABC transporter G family member 32
Locationchr01: 23843818 .. 23844751 (+)
RNA-Seq ExpressionMELO3C029135
SyntenyMELO3C029135
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTATATAAGAGCTTTTTAAGGTAATTTTCAAACATGGTAGAGATTGGTGTTGGATAGGTGTTGGTGCATTGCTCGGGTATACAATGATTTTCAATACGCTATTCACATTCTTCCTGGCATACCTTAAACGTAAGCAATCAACTATAAATTGATTATATTATTGTACTTCTGCTACTGTGTTAGTATTGGAAGACTCTGCAGGATGACTTTTGAAATATGTAAAAATATATAGGTTTTTAAATTATTTTTTCACTGATTTGGTTCTTCCCATTTTTCCCACAGCTTAGGGCAAAAGCTAAGCATTAGTCTCTTAGGAAGAACTGCAAGAGAGAGAGAAAAGAAGGAAAGGAGAAACTACTGCAATTTAGTTGAGACATTATTTGCAGTATTCTGGGTCATTGAAAGGTAAGAATCTGATTAATAGCTGTTTGAAAATTTTAGTATAGCGTTTTTTAGCCATACGTCAAGTGCTTCCCTTGTCAAACTAATTTTATAATTTTACCATCTCAACTATTTGGCAGAAAAGTACTTTAAACAGAGAGGGATGGTACTTCTCTTCCAACAACTTTCTATCTTTCAGCAATATTAATTACTATGTTGACGTTCCCATGGTGAGCTTCAAATCCAGTTCTTTACTCGTTATCTTGGGAACTTCTTGGTTGTTTATCATCAGATTTAAAGTATTACTTCAGGAGCTAAAGCAACAAGGGATAACTTACAATTGTTGGTTAATGTCAGTAGATCGTTTGGAGACACAAAGGGTAAAACTTGATTGATAGTTTTTTTAAATTATTATGGTGAGTAATTATCATAAATTGATACTTGATAGTTTCTATTTGTGACAGGCTTTGTTTGATGAGGTGATGGCACTTGTTGAGCTTTCCCCACTAAGTGGAGCTTTAGCTGGTTTTAGATTGAGTCGTATTGATTGA

mRNA sequence

ATTTATATAAGAGCTTTTTAAGGTAATTTTCAAACATGGTAGAGATTGGTGTTGGATAGGTGTTGGTGCATTGCTCGGCTTAGGGCAAAAGCTAAGCATTAGTCTCTTAGGAAGAACTGCAAGAGAGAGAGAAAAGAAGGAAAGGAGAAACTACTGCAATTTAGTTGAGACATTATTTGCAGTATTCTGGGTCATTGAAAGAGAGGGATGGTACTTCTCTTCCAACAACTTTCTATCTTTCAGCAATATTAATTACTATGTTGACGTTCCCATGGTGAGCTTCAAATCCAGTTCTTTACTCGTTATCTTGGGAACTTCTTGGTTGTTTATCATCAGATTTAAAGTATTACTTCAGGAGCTAAAGCAACAAGGGATAACTTACAATTGTTGGTTAATGTCAGTAGATCGTTTGGAGACACAAAGGGCTTTGTTTGATGAGGTGATGGCACTTGTTGAGCTTTCCCCACTAAGTGGAGCTTTAGCTGGTTTTAGATTGAGTCGTATTGATTGA

Coding sequence (CDS)

ATGGTGAGCTTCAAATCCAGTTCTTTACTCGTTATCTTGGGAACTTCTTGGTTGTTTATCATCAGATTTAAAGTATTACTTCAGGAGCTAAAGCAACAAGGGATAACTTACAATTGTTGGTTAATGTCAGTAGATCGTTTGGAGACACAAAGGGCTTTGTTTGATGAGGTGATGGCACTTGTTGAGCTTTCCCCACTAAGTGGAGCTTTAGCTGGTTTTAGATTGAGTCGTATTGATTGA

Protein sequence

MVSFKSSSLLVILGTSWLFIIRFKVLLQELKQQGITYNCWLMSVDRLETQRALFDEVMALVELSPLSGALAGFRLSRID
Homology
[Close]
BLAST of MELO3C029135 vs. NCBI nr
Match: KAA0061577.1 (ABC transporter G family member 32 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04
Identity = 54/161 (33.54%), Postives = 59/161 (36.65%), Query Frame = 0 

Query: 1   MVSFKSSSLLVILGTSWLFIIRFKVLLQELKQQGIT------------------------ 60
           MVSFKSSSLL+I    WLFII FKVLLQELKQQG+T                        
Sbjct: 831 MVSFKSSSLLIIRQLPWLFIILFKVLLQELKQQGVTEERLQLLVNVSGSFRPGVLTALLG 890

Query: 61  ------------------------------------------------------------ 73
                                                                       
Sbjct: 891 VSGAGKTTLMDVLAGRKTGGVIEGNIHISGYPKRQDTFARVSGYCEQTDIHSPCLTIMES 950

[Close]
BLAST of MELO3C029135 vs. ExPASy TrEMBL
Match: A0A5A7V3X2 (ABC transporter G family member 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001390 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.1e-05
Identity = 54/161 (33.54%), Postives = 59/161 (36.65%), Query Frame = 0 

Query: 1   MVSFKSSSLLVILGTSWLFIIRFKVLLQELKQQGIT------------------------ 60
           MVSFKSSSLL+I    WLFII FKVLLQELKQQG+T                        
Sbjct: 831 MVSFKSSSLLIIRQLPWLFIILFKVLLQELKQQGVTEERLQLLVNVSGSFRPGVLTALLG 890

Query: 61  ------------------------------------------------------------ 73
                                                                       
Sbjct: 891 VSGAGKTTLMDVLAGRKTGGVIEGNIHISGYPKRQDTFARVSGYCEQTDIHSPCLTIMES 950

The following BLAST results are available for this feature:
BLAST of MELO3C029135 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061577.11.5e-0433.54ABC transporter G family member 32 [Cucumis melo var. makuwa][more]
BLAST of MELO3C029135 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029135 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V3X27.1e-0533.54ABC transporter G family member 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
BLAST of MELO3C029135 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029135.1MELO3C029135.1mRNA