MELO3C029125 (gene) Melon (DHL92) v4

Overview
NameMELO3C029125
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retrotransposon protein
Locationchr01: 23214893 .. 23218749 (+)
RNA-Seq ExpressionMELO3C029125
SyntenyMELO3C029125
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAGTCGACTATGAGGCAATTAGGCATCTTAATGGATGGACACTCAAATAGTAAATTGGTAATTCAAGGTTTCAACCAGAGCAGCCAAAGAGTAATAGGTATGATACGCTTAGAACTCATAATTGGTGACCTGAAGGCTAGTGCATTGTTTCATGTCATAGATTCGAGGACCACTTATAAGTTGTTACTCGATCATCCTTGGATTCATGGAAATGGAGTAGTAACTTCGATACTGCTTCAGTGTTTTAAATTTTATCAAGACGGTGTAAAGAAGGTTGAGGTTGACTCTAACCCGTTCTCAGATGTTGAGTCTCACTTTATAGATGTAAAGTTTTATTTGAAGAATGAAAATAGCCCAGAAGTCGTGCCTGTAGAAATTCCTCTTGTAAAAAGATAAGATAATTTACAGCTGAAACATTAGAAGAAATATAGGCTTTAATGTCGGTTGGGAAAAATGTAAAATGAACATTAATGTTTGTTTTCAAAAGGTGGATGTTTAATGTTGGTGGAAAATCGACATTAAAGAGTAAGCTTTAATGTCGGTTTAAAACTGACATTAAAGGTCCTCCTTTTTGAATACCGACATTAAAGGTCCATTTTAATTTTAATAATTTTATTTTGTAAAAAAATATCAAATTATCTTTCATACTTTACTCTTTCGATCTTCTCCTCAGTCAATACTTTGTGGCGCAAACCCTTTCTTCTCCAAATGGGATCCGTCTATTTCTTCTCCGATGCCCGTTTCTTCTCCGAATAACCATCGCTGCCACTATTGTGCTCGCTGCCACCAATTTTCTTGCCGCCACCATTTTCGTTCTGCTCGCCCACCCTTCTAAACAAATTCGCCCGCATTTCCCTCATTCTAAACAAACTCGTCCGCGTCTCCCTCTCACATTCTCACCCCCAGACTATTAATGTCGCGCCTACCTTTAACACTCACAGCTTCTGCATCCACCTTCTAAACAAAATTGCTCGCGTCTCCCTCTCACATTCTAAACGTTGTTGTTGGTGACATCATAGTTGCTGGGGCCTTCACTGTGCTATTCAAGCTATAAGTGCATTCGACGATGGTGTCCCTACTCGATACTAACATCTAACTCCAGCGGTGGCGGCGGAAGCTTCACAGCAACGGTAATTTCCATCTTCTTTCAAGTGGTCACGATTTTTTTAATTTAGGGTTTAAGCTGCAATGTTTTTTGACTTCGATTTAGATATGCACACTGCTTGCACTACTTGTTTCTCTTTTTCTAAAAGGAACTTTGATTTCACGTTTCTTTGAATAATTGTACATGGAGAAAGCCTGTCTGATTATACTTTCTTTAGCTAACATGATACTTAAGAAAGAAAGCTAAAATTCGCTTGTTTTTCCGTAATGGTATGCCCTTGCTTCCATTTCTTATCGACTTGTTAAAAGATAAGGTGTTGAAAAAGCAAACCATAAATGTTCTTATTAGATATTTTTTTTTATCTCTGACAGAGTATTGGCTTCAATTTGAGGGAACGATGTATTTAGCCACTTCAGAACCTCGACTACCTTCAAGTAGATTGTACATTGTAGGTAAATCATTGTAAGGTATCCATCAACAGTATTCCTCTCTGAACATGGAATCCTCAACAAAATTTCTGCACATATCATACTTAGGTTGTATAAAGCTATAGAATTTGTATGATTTTAAACTGAGTCCGGGTTAGAATTTGTATGCACATATCATACATGGAATCCTGTGCAGAATTTCTGCACATACCATTCAGAAGTTTTAGTTTTCTTATCGTAAACATATTAAGTTGCATATCTATATTTGTGCTTATTATTTTGTATGATCTTAAACGTCCAAATCCAATATCTGAAGTCTGATTAAATGATGAAAATGTGATTCAGCCATCTGATGTATGATCACAGAGAATTGGGAAGCATCCAATGGAAATGGAGCACGTTAGACAACAAAGGTATATATCTTAGAACATGTAATGTAAGCTGGGGTAGGTTGGTTTAAAACTTAATCATGAGCCCATTCAAATTAAATGAAAAGTAAGGCATAATCTTTGTTGTTTTATCAAGACAAGATATGCTCATAATCATGCATAAATATTGAAAGTGACAATCCCATTAACTCCTTGGTTAAAGCTTATAAGTTACATAAACAATAGCAAAATTATTAATTAAGGGAAGTCCATAGGGACATCATCATTACCAAATGCCAACTATATTACAACTTAACTGGGAGTTAGCTTTTTTTAATATTAAATTAATGTTTTGTGGAACTGTTTGTTTTGTATATTTCAATAATGTAAAATGCTCGCGCGTGTATGGAGCGTGCAAATTTTACTATTATTTTCCCTCCCTTCTACCTTTTTCTCTGCTCTAAAGTACCATCCTCGAAGTATGTTGTATGATGCGATTTTTCAATAATACATGATATAATTTATATGTGGCAAGCAAAATATTTGAGGTCCTACTTATTTATGGTTTTGTGAATAATTTATTGATATTATTTTGTATAGCACATTAACATGTACCTGAGAGAATACATATGTAGGGCTGATCTTTTACTTATGAATGTTGTTGGTGCTATTTTCCTGTTTTGCATCCAAAGGTTTCTTCCTATTTTAGATTTGCTTATTGTAAATGGTTTTTTTTTTGGGGTTATCCATTTGTTGGGTGTTTTGTTGAGCTCTTTGTTCAATTTGAAGTTTTGATGATTTGGGTGTAGATTAATCTAGTTTTTGGACTGTGATTCACTATTTCTTGTTATTTTTTGGACGTGGGTATACATATTGATTATTGAAGTGTTGGGTATCCTTATCATAAATCTCCTTAGACGTATAAAACAAAGACTTTCATTTAAGAGGTCCCTCATTGAATGAAAAGGAAAATTACGACCTACATGTATGAACTAAATGCATTGTCTGAACTTGTTAATTTCATTGTAACTCAAAGATAATTATAGGTGGGAAATAGAAGAAATGTGTAAAAAATATTAGGAGAACGAATAATGGTGTCAATGCATAACAGTGGTAATTGTGCAAACATTAAGTTTCAACCTCTTTTTGGTACCTTGTTCTGTTGTACCTCATTGCTTTCTTGTTCAAACATATATGATAATGGAGCAAGCTTTTTGTGGGTACCTTTGATTTCTCACATTAATCCTTCTATTTTGGTAGACTTCTGGCATACTTTAGTTCGTTGCTTGAACATATATATGATGGAGTAAGTTGTCTTGCGTAGGGCGCATTGGTTTTGTGCACTTTGGAATATTTGGTTGTGAAATAATAGGAAAGAACATCAGGTCTAAATAGGATTTGCTTTGTGAGAAGAGATTTGAAATTTTATGTATTTTAGCATGGTTCTCTCTTTGGGTGCATTATTCGAAAATTCCTTTTGAAAATTATGTTATTTCTTTTTGCAATGAATTACAAAGATTCGGAGTTTATATGTGGTGAAATGAATTTAATTCATAATCTTTACTTGGATTTGAAATTACAAATAGTTTAGACATTAATGATGGTATAAAATACAACTTAAACTTGCTGAAACAGGTAGGCATTAGTTTTTATGATTCGATATTCATTATTCTTCTTTGTGTGATTATTATTTGGGTGTAGACTTATCTAGATTTTGGATTGTGATTCACTGTTTCTTGTTTTTTTTTTTTTGACGCGGGGATACATCTTGATTATTGAAGTGTTGAGTATCCTTTTCATAAATCTCTTTAGACACCTAGAACTGTATCAACTTCTGTAATTTCAATTGGCTTTCCTCCTTCATTTAAGGGTTGTGATATACTCTTGCAACCATGGAACCTAAAACTAGTTAGAATGCTAGAGCTTCGTTATCAGGGTCCTTTGAATTAA

mRNA sequence

ATGTCAAAGTCGACTATGAGGCAATTAGGCATCTTAATGGATGGACACTCAAATAGTAAATTGGTAATTCAAGGTTTCAACCAGAGCAGCCAAAGAGTAATAGGTATGATACGCTTAGAACTCATAATTGGTGACCTGAAGGCTAGTGCATTGTTTCATGTCATAGATTCGAGGACCACTTATAAGTTGTTACTCGATCATCCTTGGATTCATGGAAATGGAGTAGTAACTTCGATACTGCTTCAGTGTTTTAAATTTTATCAAGACGGTGTAAAGAAGGTTGAGGTTGACTCTAACCCGTTCTCAGATGTTGAGTCTCACTTTATAGATGTAAATCAATACTTTGTGGCGCAAACCCTTTCTTCTCCAAATGGGATCCGTCTATTTCTTCTCCGATGCCCGTTTCTTCTCCGAATAACCATCGCTGCCACTATTGTGCTCGCTGCCACCAATTTTCTTGCCGCCACCATTTTCGTTCTGCTCGCCCACCCTTCTAAACAAATTCGCCCGCATTTCCCTCATTCTAAACAAACTCGTCCGCAGTATTGGCTTCAATTTGAGGGAACGATGTATTTAGCCACTTCAGAACCTCGACTACCTTCAAGTAGATTGTACATTGTAGACATTAATGATGGTATAAAATACAACTTAAACTTGCTGAAACAGACACCTAGAACTGTATCAACTTCTGTAATTTCAATTGGCTTTCCTCCTTCATTTAAGGGTTGTGATATACTCTTGCAACCATGGAACCTAAAACTAGTTAGAATGCTAGAGCTTCGTTATCAGGGTCCTTTGAATTAA

Coding sequence (CDS)

ATGTCAAAGTCGACTATGAGGCAATTAGGCATCTTAATGGATGGACACTCAAATAGTAAATTGGTAATTCAAGGTTTCAACCAGAGCAGCCAAAGAGTAATAGGTATGATACGCTTAGAACTCATAATTGGTGACCTGAAGGCTAGTGCATTGTTTCATGTCATAGATTCGAGGACCACTTATAAGTTGTTACTCGATCATCCTTGGATTCATGGAAATGGAGTAGTAACTTCGATACTGCTTCAGTGTTTTAAATTTTATCAAGACGGTGTAAAGAAGGTTGAGGTTGACTCTAACCCGTTCTCAGATGTTGAGTCTCACTTTATAGATGTAAATCAATACTTTGTGGCGCAAACCCTTTCTTCTCCAAATGGGATCCGTCTATTTCTTCTCCGATGCCCGTTTCTTCTCCGAATAACCATCGCTGCCACTATTGTGCTCGCTGCCACCAATTTTCTTGCCGCCACCATTTTCGTTCTGCTCGCCCACCCTTCTAAACAAATTCGCCCGCATTTCCCTCATTCTAAACAAACTCGTCCGCAGTATTGGCTTCAATTTGAGGGAACGATGTATTTAGCCACTTCAGAACCTCGACTACCTTCAAGTAGATTGTACATTGTAGACATTAATGATGGTATAAAATACAACTTAAACTTGCTGAAACAGACACCTAGAACTGTATCAACTTCTGTAATTTCAATTGGCTTTCCTCCTTCATTTAAGGGTTGTGATATACTCTTGCAACCATGGAACCTAAAACTAGTTAGAATGCTAGAGCTTCGTTATCAGGGTCCTTTGAATTAA

Protein sequence

MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTTYKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQYFVAQTLSSPNGIRLFLLRCPFLLRITIAATIVLAATNFLAATIFVLLAHPSKQIRPHFPHSKQTRPQYWLQFEGTMYLATSEPRLPSSRLYIVDINDGIKYNLNLLKQTPRTVSTSVISIGFPPSFKGCDILLQPWNLKLVRMLELRYQGPLN
Homology
[Close]
BLAST of MELO3C029125 vs. NCBI nr
Match: KAA0042105.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK18048.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 222.6 bits (566), Expect = 4.0e-54
Identity = 109/114 (95.61%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           MSKSTMRQLGILMDGHSNSKLVIQGFNQS+QRVIGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 340 MSKSTMRQLGILMDGHSNSKLVIQGFNQSNQRVIGMIRLELIIGDLKASALFHVIDSRTT 399

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQY 115
           YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVE DSNPFSDVESHF+DV  Y
Sbjct: 400 YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEADSNPFSDVESHFVDVKFY 453

[Close]
BLAST of MELO3C029125 vs. NCBI nr
Match: KAA0032810.1 (uncharacterized protein E6C27_scaffold708G00640 [Cucumis melo var. makuwa] >TYK30368.1 uncharacterized protein E5676_scaffold575G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 3.1e-46
Identity = 100/126 (79.37%), Postives = 105/126 (83.33%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           M KSTMRQLGILM+  SNSKLVIQGFNQ SQRVIGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 340 MPKSTMRQLGILMEELSNSKLVIQGFNQGSQRVIGMIRLELIIGDLKASALFHVIDSRTT 399

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQYFVAQTL 120
           YKLLL  PWIHGNGVVTS L QCFKFYQDGVKK E DSNPFS+ ESHF+D    F  +  
Sbjct: 400 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKAEADSNPFSEAESHFVDAK--FYLKND 459

Query: 121 SSPNGI 127
           SSP  +
Sbjct: 460 SSPEAV 463

[Close]
BLAST of MELO3C029125 vs. NCBI nr
Match: KAA0055957.1 (uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 3.1e-46
Identity = 98/114 (85.96%), Postives = 101/114 (88.60%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           MSKSTMRQLGILM+  SNSKL+IQGFNQ SQRVIGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 46  MSKSTMRQLGILMEELSNSKLIIQGFNQGSQRVIGMIRLELIIGDLKASALFHVIDSRTT 105

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQY 115
           YKLLL  PWIHGNGVVTS L QCFKFYQDGVKKVE DSNPFS+ ESHF D   Y
Sbjct: 106 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFY 159

[Close]
BLAST of MELO3C029125 vs. NCBI nr
Match: KAA0047672.1 (uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK08327.1 uncharacterized protein E5676_scaffold648G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 3.1e-46
Identity = 102/131 (77.86%), Postives = 108/131 (82.44%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           M KSTMRQLGILM+   NSKLVIQGFNQ SQRVIGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 547 MPKSTMRQLGILMEELLNSKLVIQGFNQGSQRVIGMIRLELIIGDLKASALFHVIDSRTT 606

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQYFVAQTL 120
           YKLLL HPWIHGNGVVTS L QCFKFYQDG KKVEVDSNPFS+ ESHF D    F  +  
Sbjct: 607 YKLLLGHPWIHGNGVVTSTLHQCFKFYQDGEKKVEVDSNPFSEAESHFADAK--FYLKND 666

Query: 121 SSPNGIRLFLL 132
           SSP  + + +L
Sbjct: 667 SSPEAVSIEVL 675

[Close]
BLAST of MELO3C029125 vs. NCBI nr
Match: XP_031742888.1 (uncharacterized protein LOC116404510 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 6.8e-46
Identity = 101/125 (80.80%), Postives = 104/125 (83.20%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           M KSTM QLGILMD  SNSKLVIQGFNQ SQR IGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 344 MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 403

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQYFVAQTL 120
           YKLLL  PWIHGNGVVTS L QCFKFYQDGVKKVE DSNPFS+ ESHF D N    A+T 
Sbjct: 404 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAN----ARTF 463

Query: 121 SSPNG 126
           +S  G
Sbjct: 464 NSGKG 464

[Close]
BLAST of MELO3C029125 vs. ExPASy TrEMBL
Match: A0A5D3D347 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003710 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.9e-54
Identity = 109/114 (95.61%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           MSKSTMRQLGILMDGHSNSKLVIQGFNQS+QRVIGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 340 MSKSTMRQLGILMDGHSNSKLVIQGFNQSNQRVIGMIRLELIIGDLKASALFHVIDSRTT 399

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQY 115
           YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVE DSNPFSDVESHF+DV  Y
Sbjct: 400 YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEADSNPFSDVESHFVDVKFY 453

[Close]
BLAST of MELO3C029125 vs. ExPASy TrEMBL
Match: A0A5D3E3J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00350 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46
Identity = 100/126 (79.37%), Postives = 105/126 (83.33%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           M KSTMRQLGILM+  SNSKLVIQGFNQ SQRVIGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 340 MPKSTMRQLGILMEELSNSKLVIQGFNQGSQRVIGMIRLELIIGDLKASALFHVIDSRTT 399

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQYFVAQTL 120
           YKLLL  PWIHGNGVVTS L QCFKFYQDGVKK E DSNPFS+ ESHF+D    F  +  
Sbjct: 400 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKAEADSNPFSEAESHFVDAK--FYLKND 459

Query: 121 SSPNGI 127
           SSP  +
Sbjct: 460 SSPEAV 463

[Close]
BLAST of MELO3C029125 vs. ExPASy TrEMBL
Match: A0A5D3C8N8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001250 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46
Identity = 102/131 (77.86%), Postives = 108/131 (82.44%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           M KSTMRQLGILM+   NSKLVIQGFNQ SQRVIGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 547 MPKSTMRQLGILMEELLNSKLVIQGFNQGSQRVIGMIRLELIIGDLKASALFHVIDSRTT 606

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQYFVAQTL 120
           YKLLL HPWIHGNGVVTS L QCFKFYQDG KKVEVDSNPFS+ ESHF D    F  +  
Sbjct: 607 YKLLLGHPWIHGNGVVTSTLHQCFKFYQDGEKKVEVDSNPFSEAESHFADAK--FYLKND 666

Query: 121 SSPNGIRLFLL 132
           SSP  + + +L
Sbjct: 667 SSPEAVSIEVL 675

[Close]
BLAST of MELO3C029125 vs. ExPASy TrEMBL
Match: A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46
Identity = 98/114 (85.96%), Postives = 101/114 (88.60%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           MSKSTMRQLGILM+  SNSKL+IQGFNQ SQRVIGMIRLELIIGDLKASALFHVIDSRTT
Sbjct: 46  MSKSTMRQLGILMEELSNSKLIIQGFNQGSQRVIGMIRLELIIGDLKASALFHVIDSRTT 105

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQY 115
           YKLLL  PWIHGNGVVTS L QCFKFYQDGVKKVE DSNPFS+ ESHF D   Y
Sbjct: 106 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFY 159

[Close]
BLAST of MELO3C029125 vs. ExPASy TrEMBL
Match: A0A5A7T485 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold918G00010 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 97/114 (85.09%), Postives = 99/114 (86.84%), Query Frame = 0 

Query: 1   MSKSTMRQLGILMDGHSNSKLVIQGFNQSSQRVIGMIRLELIIGDLKASALFHVIDSRTT 60
           M KSTMRQLGILM+  SNSKLVIQGFNQ SQRVIGMIRLELIIGDLK SALFHVIDSRTT
Sbjct: 412 MPKSTMRQLGILMEELSNSKLVIQGFNQGSQRVIGMIRLELIIGDLKTSALFHVIDSRTT 471

Query: 61  YKLLLDHPWIHGNGVVTSILLQCFKFYQDGVKKVEVDSNPFSDVESHFIDVNQY 115
           YKLLL  PWIHGNGVVTS L QCFKFYQDGVKKVE DSNPFS+ ESHF D   Y
Sbjct: 472 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFY 525

The following BLAST results are available for this feature:
BLAST of MELO3C029125 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042105.14.0e-5495.61retrotransposon gag protein [Cucumis melo var. makuwa] >TYK18048.1 retrotranspos... [more]
KAA0032810.13.1e-4679.37uncharacterized protein E6C27_scaffold708G00640 [Cucumis melo var. makuwa] >TYK3... [more]
KAA0055957.13.1e-4685.96uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa][more]
KAA0047672.13.1e-4677.86uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK... [more]
XP_031742888.16.8e-4680.80uncharacterized protein LOC116404510 [Cucumis sativus][more]
BLAST of MELO3C029125 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D3471.9e-5495.61Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3E3J41.5e-4679.37Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C8N81.5e-4677.86Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00125... [more]
A0A5A7UMY21.5e-4685.96Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7T4851.3e-4585.09Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold91... [more]
BLAST of MELO3C029125 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029125.1MELO3C029125.1mRNA