MELO3C029117 (gene) Melon (DHL92) v4

Overview
NameMELO3C029117
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotrans_gag domain-containing protein
Locationchr01: 22560087 .. 22568238 (-)
RNA-Seq ExpressionMELO3C029117
SyntenyMELO3C029117
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCATGTGACTTCACGGAGCTTTCCATTGATTACATGACTGAGATATTGAGCCTGAGGCTATATGGTACCGTGTGCACACAGGTTATATTTTCGTTGTCGACGTTGAGTGTACTCCATGACAACGATGCTGTCGTGAGTGCTGGGCGGATCCTACTACGACAAAGACGATGGGAGTGCCAGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTATTGGGCGTACTTTACACCATGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTCTTATGCTTTGTTAGATTTTTTTTATGATGAACTTGGAAAATATTTTAGAAAGCCTTATTTATTACACGTTTATGTTAAACGCTTTGTTTGAACATATTTATACGTCTAAAGGTTTATCACATGTTTCGATGTCCGTATTTAGAGTTTTAAATTTAGTCACTCACTGGGCCTCGTAGCTCATTCTTTTCAAAATGTTTCCCACTTTTCAGGTAGAGATTGAGCTCTCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTTGGAATCAAACTCCAGTACGTGGTTGGAGTTGTATTTTGAGTCTGTTCATGTTGAAATGTTTTGTAAGGTTTAAATAATATCGTTCTGGAGGTCGTGGTCATAAAACTCTAGTTGTATAGGTTTTGGTCGTGATGTTTATATCAGGTTATTTTACAAACCAAGTGATGTCAGGGCTGCATCTTATGTATGTTGGGAAGGTTTTCGTGGTTTCCTCTGTGTGGTTTTCCATGTTGAACATTCTATATCTAAGATTGGTATGTTTATCAGGCTTAACGTTTAGTAGGGTCAGTAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGACAGCAGGTGGTCCGGGAGGGGGTGTGACATTCTACGTCCAAGCTTCGAGATCTTCGACACGTTCCCAACTTGTTTCTTCCACAGAAAGGTTCTTCGTATAGGTCTTCTGCCCTTTCTTACTTGTTTAGCCAGAATTTCTTCAACATGTTTGTCTTCTTTCTGACTAAGGTAGTTGATTGGGCGACTTACGACATTCAGCTGCAGGTCGTCTGTATCTTGGTGGTAGGGCTTCAGGTTACGTACTCACATGAATTACTGGATGGATTTCATCTATGTGGGTAACGCTACTCTATAAGATGTATTCCCTACCCTTTTCAGCAGTTCTACTGATCCTTCGTACGCTTTGACGAGGCACTGGTCTTTACGTCCCCAAAATCTGATCTGTTCTGGTTGAGTTTAATGAGTACCTGGCCCTCTGCCCGAAACTCAAGGGGGCATCTCTTCTTATCCGCCTCGAGGCCTTCTCTCAGTCCACTCGGGTGATGTTTGTCATTTGTTTCCACTCCTTCGTAAAATTGTGGGCTTAGAGGTTCTTCCCTACATAGCGATGATCGACAAGGTGTGGCAATACAGATTGCCTACCAAAAACAATCTCAAACGGGCTTCTCCTAGTAGATGAACTGGTTTAAGTGTTGACACAGAATTGGGCTACATCCAACAGCTTGACCCAATTCTTTTGCCTTGCATTTACAAAATGACGCAAATATTTCTCGAGCATGCAGTTGAATCGCTCGACCTGACCGTCAGTCTGGGTGTGGTAGCTTGAGGATATGTTCAAACTCGTCTCCAAGAAGGTAAATAATTTCGTTCAGAAGAAGGCAACAAATCTACCATCCTTGCCGCTCACTATACTTGTCGGAACTCCCCATAACTTAACAACATGCTTGAAGAACAACTGAGTCATAAGTTCAACTTAACACTTCTTGGTAGTGGGGATGAAGGTGGCGTATTTTGAAAATCGATCAATGATGACCAAAATTGCCTCAAAGTCACTACCTTCTGAAGATGAGTGATGAAGTCCATAGAAACACTCTCCCAAGGTCTTATTGGAACTGGCAGAGTGTCGAGAAGTCCGGAAAGCTTCGCTCTCTCTACTTTATCCTATTGACAAATGAGACAGGTCTTTGTGTACTATATGACATCATCTCTAATGTTTGGCCAAAAGTAGTCCTTCTTCAATAAAGCGTACGTTCGCTTCTATTCGGGATGGCCCACCCATAAAGTATCGTGACACTCATGCAACAATTTCTTCCTCAAGTCCCCTACTCTAGGATCGTTTAGTCGATTACCCTTTGTGACCAACAAGTCCTCATCGACCCAAAACTGTCTTATTTTACCCGCCTTAGCTAAATTCATGACATTCTGAGCGGCATGATCTTTATGCAAGAACTCTCTCAAGACATCTCAACTGACCTGTCAATCTTACTCGTTTGGAGGTGAGCTAACATGCACATGGCTGCATGTTCATTTTTCTAATTAGGGCATCAGCAGCCCAGTTGATCGACCTATTTTTATGTGCAAATTTTAAATCAAACTTGGCCAGAAATTATTGCCAACTTGCTTGCTTCGAAGTTAACTTTGGCTGGGTAAAGAAGTGGCAGGTTGCACTGTTGTCCGTCTTCACCACAAACAATGAACCAGTAGGTATTGTCTTTAGGCCCTCAAGCAACGTACTACTGCAAGCATCTATTTTTTAGACATGGTATACCTCTTTTTAGCTGCATTAGCTTCGACTTTCATATGCGATTCGGTATCCATTTTGTAGGAGAACACCACATAATCAGACGCATCCATCTCAACCTCAAAAGGTTTGGTCATATCAGTAATTCCCAAAACTGGCCCTTCCATCATGGCTTGCTTCAGGCCCTCAAAGGCAGCTTGACACTCGTTTGGAGAATCCCTCAATAAATCGCCGATAATAATTTGTAAACTTAAGAAAGGAGCGTAATTCTAAGACTGGTTTTGATATTGCCAAGTCAGTATCGCAGGAATCTTTCCTTCTTCCATCCATATTTGGCCAAACTCTATCACATGACCCAACAAGTTTATCTGCTCTTACACAAAGGAACATTTTTTTCTTTTGGCATATAGTTTGTTTTCCTTCAATTTCGGAAAAACCTTTTGAAGGTGGTCCTGTGTTCCTCCAGGGTCAAGCTATAGACCACTACATCATCTAGGTAGACCACAACAAACTTGTCAAGATATTCATGGAAGACCTGGCTCTTCAATGTACAAAAGGTTGCAGGGGCATTGGTAAGAGCAAATGACATTACGAGGAACTCAAACGCTCCATATTTGGTGACACAGGTTGTCTTAGGCTCGTCTGCCTCTACAATTCTTACTTGGTAATGTCCCGATTGCATATCTAACTTCGAAAAATACTTTACCCCATGTAAGCGGTCAAACAAGCTAATAATTATGGGAAGTGAATATTTGTTGTGAATCGTGAGCTTGTTAAGGCACAATAGTCGATTACACAATTGTAAACTCTCATCCTTCTTCTGGAAAAGAACTAGAGCCCCATAGGGAGCTTTTCCAGGCCTAATAAACCTTGCATTTAACAACTCATGCAATTGTTTTCAAAGTTTAGCTAACTCCAGAGGTGTCATACGATAAGCATTCTTCGTAGGCGGTTTTACCCCTGACAGTAACTCGATCTCATGATCAATATAATCATCCTTTGAGGTGGCAAACACTTGGGCAAACTGTCAGGCATCACATCACGATACTTCTCAAGGACACACATAATGTCCTTAGGACTGTCTCTCCTGGGTTCTCCAACGAATCAAGTGGAATGGCCATAAACGTTTGTTCGTCTCTAGTGAGATCCTTTTTTAATTGCATGGTCGAAATCATTTTCAACCCGTTAGGCTGGCGAATGTCAGTCTGTACAACAGTGGTGGCATATCCAGTGATCACTGAACATTTGGCTAAAGGCATTGAGATCACTTGATGCTCGAGTAGAAACTACATTCCTAGTACCACATCAAAGTCATCCATTTTTACCACCACAAAATCTACAAGGTCGTTCCATCCCCTCAACCTTATCATCGTTCATTTCACTAGTTCGACGATAGGTAGGGCCGTAGAATTCACGACTTTCATTCTCCATATATCCTTTTCCCAAAGAAGATTTAATCGCCTAGCTTCTGCCTCCGTTAATAAATTGTGGATTGCACCGGAATCAACCATAGTGCTCTTGGTTGGTTTCTAGTTGATCTAGGTGTCAACATACATTAAGCTCCTTTCCACTAGTGTATTTGTGTCCCCTACCTTCTTTTAAAGAGACGACAAGAATTTGAAGGCCCCCATTCGAGGGTTATCATCCTGTATGGTCCACTTCCCTCTTGGTTTGACCCAATTTATCATCTGAATCTGAAGCTAAAGAGCCTGGAAGGCATTTAAGGAAATTTTGTTAGGATATTTTCTAGCCAAGTATGGTCCCTTACATATGAAATATTTGAGAGGACGATTGGACACATTCTAGTTATTTAGTCCTCACCAAGTGTTTCCTATATTCGGTTGGTAGGGCCTGCGATCTCCATTAGGACATTTGTCTCCTTCAACAGTTTTGGAAGAACTTGGGCGATTGTTTTTATTTCCACTAGACGAGGAACTTGGATGACGTCTCACATCCTAAGAGTCATTAGACAGGTCAAACAATCGCTTTGCCAAAGTGTATACTGATGTGAGGTCTTGAACCCTTTGTTTATATAACTTTGTCTTTGCCCACGGTTTTAGCCCGTCGACAAAACAGAAAACTGCATTTCTTGGTCATATCACGTATGTCCAACATCAGCCCCACAAACTGTATTACATACTCACGAATATTGTCGGTGTGCTTCAGTTCACGTAACTTCAACCGAGCCAAGATTTCAATATTCTCAGCGAAGAATTACGAGCAGAGTTCTTTCTTCAAGCATCCCAGGTGTCTATTGTGCAACGTCCATCTTGAATGTCAACATACCGGGACCTCCACCATAACTTGGCTTCCTGAGAGAGATGCATCATCGCCAATGTGACTTTGGCTTCCTCTGTAAATGTGTTCATGGCCTTGAATTACTGCTCGAGATCAAAAATGTAGTTCTCTAAGGCCTTTGCATCCCTTGCCACACAGAAGGGCTAGGGTTTCAGAATCTTTACTCTACTAATCGGAATTGCTCTCCCAGTCGAAGATTGGTTCACCATGGTCGTGAGATTAAGTTTTGTGTTCACATCTACGATTTCATTCCCAAGGACATTGAAGGTAACTCAAAAATCCTCCGACATGCCGTTTATCATCTCTAAAAGTGTCTTTTGAGAGCTATCTAGCTCCTTGATATGGGCAACGGAGCCCGTCGAACTATCCCCACGTCCGTGGTTACCAGTTCTTCCCACTTTTCCTTATAGAGTATCAACTTTTGCCAATAACTCTTGTATTGATAATCCTTCGACATGGTCAGCCACCGTATCGATCATATCAACTTTCTTAGAAATTTGTTCGAGACAGGACTCCATGAAGCAAATGGAGTCAGGAACTTCCACTAAGTAGAGCATTTGCTCTTCTAGCTATACTAGTCGATCTTTTTGGGTCTTACCCGATTGAATCGTCGTTGACATATTTTGGTCTTAACTGTCGATAAGCCAATTTGGCTTTAATACCACTTGTCACAATCGTAACCCTTCAAACATGATTGTTCGACACTTGTTCTTTTTGGTTAACAAGTTAGCCATTTAAATTTCAAAATCTGCGAACAAACTCGCGATATGATTTAGCCTCCCTTCATGTTCTTGAGAACATTATTTTATCAAACGTGAAAGAGAAAGGAAATCATTGTAAACATCATAAAAGAAAGAATTGAAGACTGTCAATTGCAAAGAAAAGCTAAGTTTGCAAAGAGTCTGACAATGCTTGGTTGGGGATTCAACTAACACTTCTGTTTTTCGTCGTTTTACATAAGACATAACCACCTCGGCAATTGGAAAAAATAAATTAGTTGTGTGTGGGGAAGGTCGAATCAGAGCAAAAAATGGCTAAATCTCAATGGATCATGGCAGCAAGGCCACTTACAAAACCACTTACAAGGCAAGTGTGCGCCTCCCTCAGATAGATCCTTACGCTTGTATAGTCCACTAACAGCCGACAAATTTATTTTCCCTAAGTTAGGGATTCATTTTGTCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGACTGTTCACCTTAGTGACCTGATGCGGTTATGAGTACGATTAGGCGGGAGAGGCACTCGATCCTCTGAATTTCAAAGGTCGCGGAGGCACACCGAACACCATGCGACGTGCGATGCTCTTCCAGCCACTGGACCTTACCTCCAGTTAAGCCGTTTCTAGGGTGGGCAAACTGTTAAATAGAAAAGATAACTCTTCCCAAGGCCTCTGTCGACATCTTCAGAATCCCTTACGTTGTCATCAGTCGCCATGTCCCAGTTCATAAGTTTTAACCCGATTCCCTTTCAAAATTTGCACTGTCGCGTTATCAGACGAGTTTTCCCCGTCTCTTCGAATCGACTAACCCATCTGCAAGTGCCGTTCACATGGAACATTTACCCTCTTCGACCTTCAAAGTTCTCATTTGAATATTTTCTACTACCACCGAGATCTGCACCGATTGCTGCTCCACTGGGCTCACGTCCAAGATTTTGCAGTGACTGTCATGCCCTCAAACTTATTAGGGACTAGCTCTTACCCCGTTGGCCGGGTATAGGTTATGTGCTTCACCGCCATCCATTTTCGAGGCTAGTTGATTCAGCAGGTGAGTTGTTACCACTCCTTAGAAAATTTTGACTTCCATGACCAACATCCTGCTATCTTAATTGACCAACACCCTTTGTTGGATCTAGGTTAGCGAGCAGTTAGGCACCATAACCCGACTTTCAGTTCATCCCGCATCACCAGTTCTACTTATAAAAAATGGCCCACTTGGAGCTGTGGATTCCATTGCGCGACTCAACAAAGTAGCCGCGTCCTCCTACTTATTTAAAGTTTAAGAGTAGGTTGAGGGCATTACGCCTCTGATGCTCTAATCATTGGCTTTACCCAATAGAACTCGTCCACAGGCTCTAACTATCCTAAGGGAAACTTCAGAGGGAACCAACTACTAAACGGTTCAATTAGTCTTTCACCCCTATACCCAAGTACGATTAGCACGTTAATATCGCTACGAGCCTCCACTAGAGTTTCCTCTGGCTTCGCTTTGCTCAGGCATAGTTCACCATCTTTTTGGTCTCGACAGGCATTCTCACACTTGAACCTTTCTCAGAAGGTCAAGGTCGGTCAGTCGTGCAACCCACTAGGGATCTCACCAGTCAGCTTCCTTGTGCCTTATGGGTTTACTCGTCTGTTAACTCGCACACATGTCAGACTCCTTGGTTTATGTTTCAAGATGGGTTGAAGCTTGCTAGAAGGCGTGCGCTGCCAACCATAATCGAGACAACGACATCTCTACAAGTGTAACAAATGCCTAGGCGTAGGCTACCGTCTTAATTTGCATCAATCCATGCCCCAAGTTGATTGGCAGACCAGCTTGTCACCATTCCACATCCGACTGAGTCACATCACTGGCCTCCATTCGCTTTCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTCTCAATCTTCTTTTCATCTTTCCCTTGTGGTACTTGTTTGCTATCGGCCTCTCACCCATATTTCGCTTAAAACAGAACTTACCACCCGATTGGGTCTGCATTCCTAAACAATTGGACTCGTTGATAGTGCCTCGTGGTGCAGCAGGGTCCAAGCGTAATGGGGCTCTCACCCTCTCTAGGGCCCCCTTCTAAGGGACTTGTGCCTGGTTCGCCACGAAGGACGCTTCTCCAGACTACAATTCGAATGTCGACGATGCCCGATTCTCAAGCTGGGCTCTTCTCAGTTAGCTCGCCATTACTAAGGGAACCTTGTAAGGTTTTTTCCTCCCCTTATTGATATGCTTAAACTTAGCATGTAATCTCGCCTGACAAGGGGTTGCGTCGAGAGCGTCGTCCTTTTGGGGGTGGCATTCAGAGGGTCGTGAAGGAGTTAATAAAGGTGACGTTGAGGTTGAGACTCGTAACCGAGGTTGGATCAACCATCGTAGTGTTGCAACGACGAGTGTCAAGGACTTGAATTTAAGCCATCCGTATGATGGTGCGTACGGGAGGCCAGTGTATGCCCCCTGCCTCCACAACGATCCAACATTGGAAGAGTTATGTGGTGGGGGTAGCGATGCGTGA

mRNA sequence

ATGTTTTCATGTGACTTCACGGAGCTTTCCATTGATTACATGACTGAGATATTGAGCCTGAGGCTATATGGTACCGTGTGCACACAGGTTATATTTTCGTTGTCGACGTTGAGTGTACTCCATGACAACGATGCTGTCGTGAGTGCTGGGCGGATCCTACTACGACAAAGACGATGGGAGTGCCAGGCGGGCCCCACTACATCTCACTCACTGGGCCTCGTAGCTCATTCTTTTCAAAATAGATTGAGCTCTCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTTGGAATCAAACTCCAGTACGTGGTTGGAGTTGTTATTTTACAAACCAAGTGATGTCAGGGCTGCATCTTATGTATGTTGGGAAGGTTTTCGTGGTTTCCTCTGTGTGGTTTTCCATGTTGAACATTCTATATCTAAGATTGGGTCAGTAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGACAGCAGGTGGTCCGGGAGGGGGTGTGACATTCTACGTCCAAGCTTCGAGATCTTCGACACGTTCCCAACTTGTTTCTTCCACAGAAAGAAACTACATTCCTAGTACCACATCAAAGTCATCCATTTTTACCACCACAAAATCTACAAGGTCGTTCCATCCCCTCAACCTTATCATCGTTCATTTCACTAGTTCGACGATAGGTAGGGCCGTAGAATTCACGACTTTCATTCTCCATATATCCTTTTCCCAAAGAAGATTTAATCGCCTAGCTTCTGCCTCCGTTAATAAATTGTGGATTGCACCGGAATCAACCATAGTGCTCTTGACTCGTAACCGAGGTTGGATCAACCATCGTAGTGTTGCAACGACGAGTGTCAAGGACTTGAATTTAAGCCATCCGTATGATGGTGCGTACGGGAGGCCAGTGTATGCCCCCTGCCTCCACAACGATCCAACATTGGAAGAGTTATGTGGTGGGGGTAGCGATGCGTGA

Coding sequence (CDS)

ATGTTTTCATGTGACTTCACGGAGCTTTCCATTGATTACATGACTGAGATATTGAGCCTGAGGCTATATGGTACCGTGTGCACACAGGTTATATTTTCGTTGTCGACGTTGAGTGTACTCCATGACAACGATGCTGTCGTGAGTGCTGGGCGGATCCTACTACGACAAAGACGATGGGAGTGCCAGGCGGGCCCCACTACATCTCACTCACTGGGCCTCGTAGCTCATTCTTTTCAAAATAGATTGAGCTCTCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTTGGAATCAAACTCCAGTACGTGGTTGGAGTTGTTATTTTACAAACCAAGTGATGTCAGGGCTGCATCTTATGTATGTTGGGAAGGTTTTCGTGGTTTCCTCTGTGTGGTTTTCCATGTTGAACATTCTATATCTAAGATTGGGTCAGTAG

Protein sequence

MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTSHSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSCYFTNQVMSGLHLMYVGKVFVVSSVWFSMLNILYLRLGQ
Homology
[Close]
BLAST of MELO3C029117 vs. NCBI nr
Match: TYK27262.1 (hypothetical protein E5676_scaffold244G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-18
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 9   LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTS 68
           +S DYMTEILSL LYGTVCTQVIFSLSTLSVL +NDA VSAGRI LRQRRWEC+ GPTTS
Sbjct: 237 ISTDYMTEILSLSLYGTVCTQVIFSLSTLSVLRNNDAAVSAGRIPLRQRRWECRTGPTTS 296

[Close]
BLAST of MELO3C029117 vs. NCBI nr
Match: TYK11693.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-15
Identity = 57/116 (49.14%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 1   MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWE 60
           MFSCDF ELSIDY+TEILSLRLYGTVCTQVIF LSTLSVLHDNDAVV     +       
Sbjct: 1   MFSCDFAELSIDYVTEILSLRLYGTVCTQVIFLLSTLSVLHDNDAVVEIELPVPDTLPTS 60

Query: 61  CQAGPTTSHSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSCYFTNQVMSG 117
            ++  + S S G+V      R    C +H      V+     +G +C+ T + M G
Sbjct: 61  AESSKSNSRSAGIV------RGDDVCWLHV-----VFRAKTDKGTACWETAERMLG 105

[Close]
BLAST of MELO3C029117 vs. NCBI nr
Match: TYJ96574.1 (uncharacterized protein E5676_scaffold791G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 2.6e-15
Identity = 54/99 (54.55%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 9   LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTS 68
           LSIDYMTEILS+RLYGTVCTQ+IF LSTLSVL DN+A V                     
Sbjct: 144 LSIDYMTEILSMRLYGTVCTQIIFPLSTLSVLRDNNAFV--------------------- 203

Query: 69  HSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSC 108
                        +SS CLIH QRLLKV +QTPVRGWSC
Sbjct: 204 ------------EMSSWCLIHCQRLLKVSDQTPVRGWSC 209

[Close]
BLAST of MELO3C029117 vs. NCBI nr
Match: TYK27997.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 7.5e-15
Identity = 64/116 (55.17%), Postives = 67/116 (57.76%), Query Frame = 0 

Query: 9   LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTS 68
           LSIDYMTEILSLR YGTVCTQVIF LSTLSVL DNDAVV            E     T  
Sbjct: 204 LSIDYMTEILSLRPYGTVCTQVIFPLSTLSVLRDNDAVVEI----------ELPVPDTLP 263

Query: 69  HSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSCYFTNQVMSGLHLMYVGK 125
            S      SF++  SS  L  Y   + V          CYFTNQVMSGLHLMYVGK
Sbjct: 264 SS----TESFESN-SSTWLELYFEFVHV-------EMFCYFTNQVMSGLHLMYVGK 297

[Close]
BLAST of MELO3C029117 vs. NCBI nr
Match: KAA0066850.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 7.5e-15
Identity = 64/116 (55.17%), Postives = 67/116 (57.76%), Query Frame = 0 

Query: 9   LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTS 68
           LSIDYMTEILSLR YGTVCTQVIF LSTLSVL DNDAVV            E     T  
Sbjct: 218 LSIDYMTEILSLRPYGTVCTQVIFPLSTLSVLRDNDAVVEI----------ELPVPDTLP 277

Query: 69  HSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSCYFTNQVMSGLHLMYVGK 125
            S      SF++  SS  L  Y   + V          CYFTNQVMSGLHLMYVGK
Sbjct: 278 SS----TESFESN-SSTWLELYFEFVHV-------EMFCYFTNQVMSGLHLMYVGK 311

[Close]
BLAST of MELO3C029117 vs. ExPASy TrEMBL
Match: A0A5D3DUS7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00290 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 9   LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTS 68
           +S DYMTEILSL LYGTVCTQVIFSLSTLSVL +NDA VSAGRI LRQRRWEC+ GPTTS
Sbjct: 237 ISTDYMTEILSLSLYGTVCTQVIFSLSTLSVLRNNDAAVSAGRIPLRQRRWECRTGPTTS 296

[Close]
BLAST of MELO3C029117 vs. ExPASy TrEMBL
Match: A0A5D3CIF4 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00010 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.6e-16
Identity = 57/116 (49.14%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 1   MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWE 60
           MFSCDF ELSIDY+TEILSLRLYGTVCTQVIF LSTLSVLHDNDAVV     +       
Sbjct: 1   MFSCDFAELSIDYVTEILSLRLYGTVCTQVIFLLSTLSVLHDNDAVVEIELPVPDTLPTS 60

Query: 61  CQAGPTTSHSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSCYFTNQVMSG 117
            ++  + S S G+V      R    C +H      V+     +G +C+ T + M G
Sbjct: 61  AESSKSNSRSAGIV------RGDDVCWLHV-----VFRAKTDKGTACWETAERMLG 105

[Close]
BLAST of MELO3C029117 vs. ExPASy TrEMBL
Match: A0A5D3BC77 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold791G00040 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 54/99 (54.55%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 9   LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTS 68
           LSIDYMTEILS+RLYGTVCTQ+IF LSTLSVL DN+A V                     
Sbjct: 144 LSIDYMTEILSMRLYGTVCTQIIFPLSTLSVLRDNNAFV--------------------- 203

Query: 69  HSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSC 108
                        +SS CLIH QRLLKV +QTPVRGWSC
Sbjct: 204 ------------EMSSWCLIHCQRLLKVSDQTPVRGWSC 209

[Close]
BLAST of MELO3C029117 vs. ExPASy TrEMBL
Match: A0A5A7VI26 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002210 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.6e-15
Identity = 64/116 (55.17%), Postives = 67/116 (57.76%), Query Frame = 0 

Query: 9   LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTS 68
           LSIDYMTEILSLR YGTVCTQVIF LSTLSVL DNDAVV            E     T  
Sbjct: 218 LSIDYMTEILSLRPYGTVCTQVIFPLSTLSVLRDNDAVVEI----------ELPVPDTLP 277

Query: 69  HSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSCYFTNQVMSGLHLMYVGK 125
            S      SF++  SS  L  Y   + V          CYFTNQVMSGLHLMYVGK
Sbjct: 278 SS----TESFESN-SSTWLELYFEFVHV-------EMFCYFTNQVMSGLHLMYVGK 311

[Close]
BLAST of MELO3C029117 vs. ExPASy TrEMBL
Match: A0A5D3DW05 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002130 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.6e-15
Identity = 64/116 (55.17%), Postives = 67/116 (57.76%), Query Frame = 0 

Query: 9   LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLHDNDAVVSAGRILLRQRRWECQAGPTTS 68
           LSIDYMTEILSLR YGTVCTQVIF LSTLSVL DNDAVV            E     T  
Sbjct: 204 LSIDYMTEILSLRPYGTVCTQVIFPLSTLSVLRDNDAVVEI----------ELPVPDTLP 263

Query: 69  HSLGLVAHSFQNRLSSRCLIHYQRLLKVWNQTPVRGWSCYFTNQVMSGLHLMYVGK 125
            S      SF++  SS  L  Y   + V          CYFTNQVMSGLHLMYVGK
Sbjct: 264 SS----TESFESN-SSTWLELYFEFVHV-------EMFCYFTNQVMSGLHLMYVGK 297

The following BLAST results are available for this feature:
BLAST of MELO3C029117 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK27262.12.5e-1885.00hypothetical protein E5676_scaffold244G00290 [Cucumis melo var. makuwa][more]
TYK11693.12.0e-1549.14gag protease polyprotein [Cucumis melo var. makuwa][more]
TYJ96574.12.6e-1554.55uncharacterized protein E5676_scaffold791G00040 [Cucumis melo var. makuwa][more]
TYK27997.17.5e-1555.17putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0066850.17.5e-1555.17putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C029117 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C029117 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DUS71.2e-1885.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CIF49.6e-1649.14Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5D3BC771.2e-1554.55CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7VI263.6e-1555.17Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=... [more]
A0A5D3DW053.6e-1555.17Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=... [more]
BLAST of MELO3C029117 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029117.1MELO3C029117.1mRNA