MELO3C029099 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029099
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr08: 14268663 .. 14271691 (+)
RNA-Seq Expression	MELO3C029099
Synteny	MELO3C029099

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTATGTCCACAGCCATTATGTCATATCGACGTAATAATTTTATGAAGACAGACGATATGTTCCTCGAGTTTGAGGATGATTTAGATAACATTGCGGAAGGGTCGTCGTCTATGGGCGACAATTCGAGTGAGTCTAAGAATTTTCTTCATTTTAACTTACGATTATTTCATGTTCTTTTTTCTAACATTATATGTTATTATCGATTTATTGAGCAGGATCTTCTTCTCAACAACATGCGACTCCGACTCATAGGAGACGTGCACAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGACGCATTTCATGACGATCACCCTTGGAGCGAGAAGCCTATTTCTCCACACGCTGTTCGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCCCGTCCGTTGTCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGATCGTCAAGGGCGACCTCCAAGTAATTAAGTGCACTACACATTTAAGATTTCATTTGAAACATATCTAACTTTAACCAATCTAATGTGTTATGTTTGTAATGTGTAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGATGTAACGACCCAACTCCTTATACTGAGCCGAAGTCATTACTAAATGTAGAACAAGTGGTTTAAGTCATACAATTTAGCAAAAACGCATAAGGTTTGAGAAATTTATTTATGAAAATCCAATAAAATAATATGCAAAAATGAAATTTCGTTCTAAAGTCCTACTCGGGCCCTATCTACTAAAAAAATGGTAAATAGTGAAAAATACTCAAACTCAGGTACTAAAGTCAAAAACAAGAATAAGCGGAAGCAGAAGTCCCTATGACTCGCCACGGTCACTTCTGGTCGCTCGCCAGCTTGCCCTTGCCCTTGCCTCGTCCTCTACCTGAAAACATGACATGAAAAGAGTGAGTATAAAATACTCAGTAAGGGACCCACTACTAGTCCCACTAGGTGCCTGTTAGCTTCCTGTCAGAGTCCTGTAACTGGTACCCAATCTCTGGCACGTTCCCGAACACGTGCAACATGCGCTCCCGTAGGAACGTAACTCTGGTCTTCGGTGCCCCGGGGGACACCTAGGACAATCGGGATGCGAGGACCCCATCGAGTCACTCGAGTCATATCTATATCCATGCTAGACTGGTGTCCCGTCAGACCGCACAGTCCTAAATAGGTGGTGATCCCGAAGGACACCCATGCAAGTACGACTCTAACAGGTTAAGCTAACAGGTACCCTAATCGCAGTATACATACACATGGCATCATCATATAACATAACAGATAAATCATCATTACACTCTCCATCTCGACACCTTCGTACAGCCATAACAGTTCTTGTCATCACAACATCATGCTATAATATAACCGTATCATCAATCGCATCATACTATCATTAATTTTCATGCATCGTACAGTCTAGTCCTCAACATGCACAATTGAAGGTATACGTGACCTCATAATTCTAAACATGGAGCTAGTAGTAGAAATCTCTTACCTGGAGATTTACTTGACGAGTCCTAACCGCGAGGCAAGTATGCTTTCCAAGTAACGAGGTCCTAACTGTTTAATACGCCAAAATTCGTAATTAGGTCACCAACGACTAACGGTTCAAAACTCAGTTGAAATGACTTGCCCTAGAAAGAGGTTGCAATGGTTGAGCCCCTACTGAAGAAATCTCACGCTGCAGCGGTTACTTGGTCCAAGACGTCCCTTAAGGAAATTATCTAATTTAATTCCAAATTAAATTATTTAGTGCCCAAAAACATTGAATCTTACTGGGTAATGCTAAAATAATTAATTTAATTACCAAAAATTAGGTGGAAGGAGCCAAATTAGGCTTGGCGGCTCGGCTGGAAAGAGAACAGGGATCGGCTTGGCTTGGAGGTTGAAGATCGGCTTGGCTCGCGGCGCAGACAGGCGCGGCTCGTGGTGCAGACAGACGCGGCTCGGCTTAGTGCAGAGGCTACGCACGTGCGGCTCGCACGCGGGAGCTGCTCGGCTCACGGGTACACGCGGCGCGGGCCGGGCTTCGGGTCGGAGGCGCGCGTCGGTTCGGGTCGCGGAGCGGGTTTTCGGCCGGGTCGGACCTTTGCGCGCGAGGCGTTGGCTGCTGGGTTTCAGTCGGTGCGACGGCTGGCTGACGGACGTTCCGGCTGCGCTACGTCGGATCTAAGCAGCGCGACGTGGCTGGGCGTGTGAACGACGGCGACGCGGACACGGCTGGCTGACGGATCGGCTGTGGCTCCTCAGCGCTTGATCGGAGCGACGCAACGCGGCTCGGCTGCTCTGCCTCAGATCGAAGCTGCGCGACGAGTTTCGGCTGCAGACACGGCGCGGCGTGCGTAGCTATTCCTAGGCGTGCGGTGGCTTGGCTCGATTTGAAATCTCCGGCGCGGCTGGGCATGTGGCGTTGGCTATGGTGGCGGCGGCTATGGTGAGAGCAAATTTTGGGGCTAGGGTTTTCTTGGGATGGTGATGAATTCCACGCCTCCCAATGCCCCCTCTTTAAAAGAACCAATAAAAAAAGATAAAATAAAACCCACACAAAATTACTTTCTTTTCTTCTTTTATTATTATTTTCTTTTCTACTTTAATCCAATAGCAACTCTCCTCTCTCTCTCTTCATTAAAGCCACCTTTGACCCTTTCCAAGGCATTAATTAATTTGTTGCTTCACAATTAATTAATTTATTTCACCCTTAAACCTCAACAATTAAAATAACCAACCAAGGAAAATTTTAACCTTAATTAAGTGTAAGTCAAAATAATCTCATTCCATAACCACTTTTGAAATTAAAAAAAATACTCTTGAGATGAACAATGGAACTCTAATCTACTGGGGCGTTACAGTTGAGTATCAGATGCTCACAACCTTTAAAGAGTTCTGGACCGACTGTCACAAACATTTCAAAAAGTACAACGACCCGAAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGAACGTCATGAGGATTGA

mRNA sequence

TTTTCTATGTCCACAGCCATTATGTCATATCGACGTAATAATTTTATGAAGACAGACGATATGTTCCTCGAGTTTGAGGATGATTTAGATAACATTGCGGAAGGGTCGTCGTCTATGGGCGACAATTCGACAGGATCTTCTTCTCAACAACATGCGACTCCGACTCATAGGAGACGTGCACAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGACGCATTTCATGACGATCACCCTTGGAGCGAGAAGCCTATTTCTCCACACGCTGTTCGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCCCGTCCGTTGTCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGATCGTCAAGGGCGACCTCCAACGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGTATCAGATGCTCACAACCTTTAAAGAGTTCTGGACCGACTGTCACAAACATTTCAAAAAGTACAACGACCCGAAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGAACGTCATGAGGATTGA

Coding sequence (CDS)

ATGGACGCATTTCATGACGATCACCCTTGGAGCGAGAAGCCTATTTCTCCACACGCTGTTCGCTTCAGCCAGGCGATAGACGTGTGCGTGCGAAAGACATTTCCCGTCCGTTGTCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGATCGTCAAGGGCGACCTCCAACGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGTATCAGATGCTCACAACCTTTAAAGAGTTCTGGACCGACTGTCACAAACATTTCAAAAAGTACAACGACCCGAAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGAACGTCATGAGGATTGA

Protein sequence

MDAFHDDHPWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQAMNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED

Homology

[Close]

BLAST of MELO3C029099 vs. NCBI nr
Match: TYK05098.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 6.3e-49
Identity = 93/107 (86.92%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPISPHAVRFSQAI VCV+KTFPVRCLKWADVGREYIE+VKGDLQRLFVLDFNDQA
Sbjct: 282 PGAEKPISPHAVRFSQAIGVCVQKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQA 341

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFV++QMLTTFKEFW +CH+HFKKY+DP+EARANPPNALV R ED
Sbjct: 342 MNRFVQHQMLTTFKEFWANCHRHFKKYSDPEEARANPPNALVGRDED 388

[Close]

BLAST of MELO3C029099 vs. NCBI nr
Match: KAA0040895.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 6.3e-49
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPISPHAVRFSQAI VCVRKTFPVRCLKW DVGREYIE+VKGDLQRLFV+DFNDQA
Sbjct: 146 PGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWGDVGREYIEVVKGDLQRLFVVDFNDQA 205

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFVE+QMLTTFKEF  DCH+HFKKY+DP+EARANPPNALV RHED
Sbjct: 206 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRHED 252

[Close]

BLAST of MELO3C029099 vs. NCBI nr
Match: TYK16353.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 94/107 (87.85%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPIS HAVRFSQAI VCVRKTFPVRCLKWADVGREYIE+VKGDLQRLFVLDFND A
Sbjct: 120 PGAEKPISRHAVRFSQAIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDHA 179

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFVE+QMLTTFKEFW DCH+HFKKY+DP+EARANPPNALV R ED
Sbjct: 180 MNRFVEHQMLTTFKEFWADCHRHFKKYSDPEEARANPPNALVGRDED 226

[Close]

BLAST of MELO3C029099 vs. NCBI nr
Match: KAA0057529.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 95/107 (88.79%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPISPHAVRFSQAI VCVRKTFPVRCLKWADVGREYIE+VKGDLQRLFVLDFNDQA
Sbjct: 67  PEAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQA 126

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFVE+QMLTTFKEF  DCH+HFKKY+DP+EARANPPNALV R ED
Sbjct: 127 MNRFVEHQMLTTFKEFRVDCHRHFKKYSDPEEARANPPNALVGRDED 173

[Close]

BLAST of MELO3C029099 vs. NCBI nr
Match: KAA0048673.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK18171.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPISPHAVRFSQAI VCVRKTFPVRCLKWAD+GREYIE+VKGDLQRLFVLDFNDQA
Sbjct: 68  PRAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWADIGREYIEVVKGDLQRLFVLDFNDQA 127

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFVE+QMLTTFKEF  DCH+HFKKY+DP+EARANPPNALV R ED
Sbjct: 128 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDED 174

[Close]

BLAST of MELO3C029099 vs. ExPASy TrEMBL
Match: A0A5D3C1F9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00010 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49
Identity = 93/107 (86.92%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPISPHAVRFSQAI VCV+KTFPVRCLKWADVGREYIE+VKGDLQRLFVLDFNDQA
Sbjct: 282 PGAEKPISPHAVRFSQAIGVCVQKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQA 341

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFV++QMLTTFKEFW +CH+HFKKY+DP+EARANPPNALV R ED
Sbjct: 342 MNRFVQHQMLTTFKEFWANCHRHFKKYSDPEEARANPPNALVGRDED 388

[Close]

BLAST of MELO3C029099 vs. ExPASy TrEMBL
Match: A0A5A7THM5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00040 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPISPHAVRFSQAI VCVRKTFPVRCLKW DVGREYIE+VKGDLQRLFV+DFNDQA
Sbjct: 146 PGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWGDVGREYIEVVKGDLQRLFVVDFNDQA 205

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFVE+QMLTTFKEF  DCH+HFKKY+DP+EARANPPNALV RHED
Sbjct: 206 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRHED 252

[Close]

BLAST of MELO3C029099 vs. ExPASy TrEMBL
Match: A0A5D3CWU5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001370 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.2e-49
Identity = 94/107 (87.85%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPIS HAVRFSQAI VCVRKTFPVRCLKWADVGREYIE+VKGDLQRLFVLDFND A
Sbjct: 120 PGAEKPISRHAVRFSQAIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDHA 179

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFVE+QMLTTFKEFW DCH+HFKKY+DP+EARANPPNALV R ED
Sbjct: 180 MNRFVEHQMLTTFKEFWADCHRHFKKYSDPEEARANPPNALVGRDED 226

[Close]

BLAST of MELO3C029099 vs. ExPASy TrEMBL
Match: A0A5A7UVG1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G004200 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.8e-49
Identity = 95/107 (88.79%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPISPHAVRFSQAI VCVRKTFPVRCLKWADVGREYIE+VKGDLQRLFVLDFNDQA
Sbjct: 67  PEAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVLDFNDQA 126

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFVE+QMLTTFKEF  DCH+HFKKY+DP+EARANPPNALV R ED
Sbjct: 127 MNRFVEHQMLTTFKEFRVDCHRHFKKYSDPEEARANPPNALVGRDED 173

[Close]

BLAST of MELO3C029099 vs. ExPASy TrEMBL
Match: A0A5D3D1Q1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001030 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.9e-49
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 9   PWSEKPISPHAVRFSQAIDVCVRKTFPVRCLKWADVGREYIEIVKGDLQRLFVLDFNDQA 68
           P +EKPISPHAVRFSQAI VCVRKTFPVRCLKWAD+GREYIE+VKGDLQRLFVLDFNDQA
Sbjct: 68  PRAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWADIGREYIEVVKGDLQRLFVLDFNDQA 127

Query: 69  MNRFVEYQMLTTFKEFWTDCHKHFKKYNDPKEARANPPNALVERHED 116
           MNRFVE+QMLTTFKEF  DCH+HFKKY+DP+EARANPPNALV R ED
Sbjct: 128 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDED 174

The following BLAST results are available for this feature:

BLAST of MELO3C029099 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05098.1	6.3e-49	86.92	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0040895.1	6.3e-49	87.85	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK16353.1	1.1e-48	87.85	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0057529.1	1.4e-48	88.79	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0048673.1	1.8e-48	87.85	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK18171.1 CACTA en-...	[more]

BLAST of MELO3C029099 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C029099 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C1F9	3.1e-49	86.92	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7THM5	3.1e-49	87.85	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CWU5	5.2e-49	87.85	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UVG1	6.8e-49	88.79	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3D1Q1	8.9e-49	87.85	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C029099 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029099.1	MELO3C029099.1	mRNA