MELO3C029092 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCGCAGGGAGCACTGGTTTGAAAAACCCATTGCCAACATGGATTCAAACTCTGTCAAGTTCTCCAGACGAGGTATTAATGTATATTTTTAAGAATTACACAAAAGTTGTACATGTTTATAACTTTTTGTATGGCTAATTATAGCATAGACCAGAAGATACAATGGTGGAGGGGTCGGGAAGCAAGCGAGAAAGTTCAATAACTTCGAAAAAGAGGGGGAGGAATGAACCTCCAAAAGAAGATGCTATTGTAAAGAAGAAACAGACGATAAAAAGCTTGGTAAACTGCTTTATTAAGATTTATTTTCTAATGAGTACAATGAAGGTTTTGATGTTGTGGTACATGGAGGTTTAAAAAAGGAAAGTTTACAGAAGGAAACGTGA ATGAGTCGCAGGGAGCACTGGTTTGAAAAACCCATTGCCAACATGGATTCAAACTCTGTCAAGTTCTCCAGACGAGGTATTAATCATAGACCAGAAGATACAATGGTGGAGGGGTCGGGAAGCAAGCGAGAAAGTTCAATAACTTCGAAAAAGAGGGGGAGGAATGAACCTCCAAAAGAAGATGCTATTGTAAAGAAGAAACAGACGATAAAAAGCTTGTACAATGAAGGTTTTGATGTTGTGGTACATGGAGGTTTAAAAAAGGAAAGTTTACAGAAGGAAACGTGA ATGAGTCGCAGGGAGCACTGGTTTGAAAAACCCATTGCCAACATGGATTCAAACTCTGTCAAGTTCTCCAGACGAGGTATTAATCATAGACCAGAAGATACAATGGTGGAGGGGTCGGGAAGCAAGCGAGAAAGTTCAATAACTTCGAAAAAGAGGGGGAGGAATGAACCTCCAAAAGAAGATGCTATTGTAAAGAAGAAACAGACGATAAAAAGCTTGTACAATGAAGGTTTTGATGTTGTGGTACATGGAGGTTTAAAAAAGGAAAGTTTACAGAAGGAAACGTGA MSRREHWFEKPIANMDSNSVKFSRRGINHRPEDTMVEGSGSKRESSITSKKRGRNEPPKEDAIVKKKQTIKSLYNEGFDVVVHGGLKKESLQKET Homology
BLAST of MELO3C029092 vs. NCBI nr
Match: KAA0067216.1 (TPRXL isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 1.7e-15 Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of MELO3C029092 vs. NCBI nr
Match: KAA0048427.1 (hypothetical protein E6C27_scaffold61G00010 [Cucumis melo var. makuwa] >TYK28223.1 hypothetical protein E5676_scaffold600G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 7.9e-05 Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of MELO3C029092 vs. NCBI nr
Match: KAA0064135.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 53.9 bits (128), Expect = 8.7e-04 Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of MELO3C029092 vs. ExPASy TrEMBL
Match: A0A5A7VL86 (TPRXL isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00210 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 8.2e-16 Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of MELO3C029092 vs. ExPASy TrEMBL
Match: A0A5D3DX05 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00010 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.8e-05 Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of MELO3C029092 vs. ExPASy TrEMBL
Match: A0A5A7VE08 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00540 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.2e-04 Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|