MELO3C029081 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029081
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 19373352 .. 19374114 (+)
RNA-Seq Expression	MELO3C029081
Synteny	MELO3C029081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCCCGTCAAAGAAAAGAAGACCAATATCAAGCCCAAGGAGGAGAAGATAAAATGCAAAGTGTTGAAGCCTAGGATGTTGCATGACTTTCAGAACATGAAGAGACCCAACGTAGCATAAAAATAGTCACCGAAAAGCATAGAATGTGCATAGTGGACGTCGAGTGTTGGAAGCTTATAAATACATTAAAAAAGGGACAACAAAGGGGGAGGAATGAGAGCAGAAATGCTACCTAAAATCTTTTGGGCATCCAAATTTTCGTATGTCCTCAAGTCCAAAACTAGATCACTTCTGTAAACCAAGAAATTAGAAATTGTAGTCGTTCTCTATTTCGCTTATATTTACATACATTGCTCATATTGCTTGTACTAGATTTTGGAGATTTAACTTTTTAATACATCTGACTTAACTTTTTGATGCAGATAATGAACTTGATTCGAGGATGAATCCTTCAAAAGGGAGAGAAGATGATATGAACCAGGACACCCTTGTGTTGCCTCCGGGATCAATCACACGTTTCAGAGCCAAGAAACCATAGTTAGCATTGAATTTCCACATTCAAGAGGAAATACACTCAATTGAGGAGATTCAAGCAACAATAATTTATCAAAAGATCTATAATTAGAGTTAGTTGACACTCTAGGATGGAACCAATTGACCTATGACATCTTATGACTTCAAGACTGCTTTATAAGGCTTCAATTTGGATTCAAGGACAAATTTTACAAAAGAATGAGAGGATGATATGATCTACCAAAC

mRNA sequence

ATGGGACCCCGTCAAAGAAAAGAAGACCAATATCAAGCCCAAGGAGGAGAAGATAAAATGCAAAATAATGAACTTGATTCGAGGATGAATCCTTCAAAAGGGAGAGAAGATGATATGAACCAGGACACCCTTGTGTTGCCTCCGGGATCAATCACACGTTTCAGAGCCAAGAAACCATAGTTAGCATTGAATTTCCACATTCAAGAGGAAATACACTCAATTGAGGAGATTCAAGCAACAATAATTTATCAAAAGATCTATAATTAGAGTTAGTTGACACTCTAGGATGGAACCAATTGACCTATGACATCTTATGACTTCAAGACTGCTTTATAAGGCTTCAATTTGGATTCAAGGACAAATTTTACAAAAGAATGAGAGGATGATATGATCTACCAAAC

Coding sequence (CDS)

ATGGGACCCCGTCAAAGAAAAGAAGACCAATATCAAGCCCAAGGAGGAGAAGATAAAATGCAAAATAATGAACTTGATTCGAGGATGAATCCTTCAAAAGGGAGAGAAGATGATATGAACCAGGACACCCTTGTGTTGCCTCCGGGATCAATCACACGTTTCAGAGCCAAGAAACCATAG

Protein sequence

MGPRQRKEDQYQAQGGEDKMQNNELDSRMNPSKGREDDMNQDTLVLPPGSITRFRAKKP

Homology

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BLAST of MELO3C029081 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.6e-04
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 23  NELDSRMNPSKGREDDMNQDTLVLPPGSITRFRAKK 59
           ++ DSR NPSKG EDDMNQD L LP G ITR RAK+
Sbjct: 485 DDFDSRTNPSKGGEDDMNQDALALPSGPITRSRAKQ 520

The following BLAST results are available for this feature:

BLAST of MELO3C029081 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C029081 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C029081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYV9	7.6e-04	69.44	uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of MELO3C029081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029081.1	MELO3C029081.1	mRNA