MELO3C029080 (gene) Melon (DHL92) v4

Overview
NameMELO3C029080
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCytochrome b-c1 complex subunit 7
Locationchr01: 19323316 .. 19323534 (+)
RNA-Seq ExpressionMELO3C029080
SyntenyMELO3C029080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAGATCGAAATGGTATCCTTTTGGAGTCATTCTCTTTCCCCAAAGAAGAACTAGTTCACTTGTCATTGCATGAAAGCACTCACCCAACAGCTTGTAATTATGGCAACGATCCGTACGATGATATTGATGTGAAGGAGACTTTGAATCAACTACCAAGGGAGATTCTTAATATGCGCAATCAACTTCTGAAGCAGGCCATGAACCTTCCGTGA

mRNA sequence

ATGGAGAAAGATCGAAATGGTATCCTTTTGGAGTCATTCTCTTTCCCCAAAGAAGAACTAGTTCACTTGTCATTGCATGAAAGCACTCACCCAACAGCTTGTAATTATGGCAACGATCCGTACGATGATATTGATGTGAAGGAGACTTTGAATCAACTACCAAGGGAGATTCTTAATATGCGCAATCAACTTCTGAAGCAGGCCATGAACCTTCCGTGA

Coding sequence (CDS)

ATGGAGAAAGATCGAAATGGTATCCTTTTGGAGTCATTCTCTTTCCCCAAAGAAGAACTAGTTCACTTGTCATTGCATGAAAGCACTCACCCAACAGCTTGTAATTATGGCAACGATCCGTACGATGATATTGATGTGAAGGAGACTTTGAATCAACTACCAAGGGAGATTCTTAATATGCGCAATCAACTTCTGAAGCAGGCCATGAACCTTCCGTGA

Protein sequence

MEKDRNGILLESFSFPKEELVHLSLHESTHPTACNYGNDPYDDIDVKETLNQLPREILNMRNQLLKQAMNLP
Homology
BLAST of MELO3C029080 vs. NCBI nr
Match: KAE8646126.1 (hypothetical protein Csa_023819, partial [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-10
Identity = 41/57 (71.93%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 17  KEELVHLSLHES--THPTACNYGNDPYDDIDVKETLNQLPREILNMRNQLLKQAMNL 72
           ++  VH S HES  THPT  NYGND Y DIDVKETLNQLPREIL+M  Q LKQAMNL
Sbjct: 55  QKRTVHSSSHESTATHPTPHNYGNDLYYDIDVKETLNQLPREILDMHIQRLKQAMNL 111

BLAST of MELO3C029080 vs. NCBI nr
Match: XP_040966316.1 (cytochrome b-c1 complex subunit 7-2, mitochondrial isoform X1 [Gossypium hirsutum])

HSP 1 Score: 55.1 bits (131), Expect = 3.0e-04
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 10 LESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRNQ 69
          L+SF   +E+LV  S HE        YG       D Y D+D+KE LN+LPREI+N RNQ
Sbjct: 5  LQSFLGSQEKLVGSSAHEILSKRLRKYGLRYDDLYDRYYDLDIKEALNRLPREIVNARNQ 64

Query: 70 LLKQAMNL 72
           LK++M+L
Sbjct: 65 RLKRSMDL 72

BLAST of MELO3C029080 vs. NCBI nr
Match: XP_016742674.2 (cytochrome b-c1 complex subunit 7-2, mitochondrial isoform X2 [Gossypium hirsutum] >KAG4109491.1 hypothetical protein ERO13_1Z049369v2 [Gossypium hirsutum])

HSP 1 Score: 55.1 bits (131), Expect = 3.0e-04
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 10 LESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRNQ 69
          L+SF   +E+LV  S HE        YG       D Y D+D+KE LN+LPREI+N RNQ
Sbjct: 5  LQSFLGSQEKLVGSSAHEILSKRLRKYGLRYDDLYDRYYDLDIKEALNRLPREIVNARNQ 64

Query: 70 LLKQAMNL 72
           LK++M+L
Sbjct: 65 RLKRSMDL 72

BLAST of MELO3C029080 vs. NCBI nr
Match: KAG4109490.1 (hypothetical protein ERO13_1Z049369v2 [Gossypium hirsutum])

HSP 1 Score: 55.1 bits (131), Expect = 3.0e-04
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 10 LESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRNQ 69
          L+SF   +E+LV  S HE        YG       D Y D+D+KE LN+LPREI+N RNQ
Sbjct: 5  LQSFLGSQEKLVGSSAHEILSKRLRKYGLRYDDLYDRYYDLDIKEALNRLPREIVNARNQ 64

Query: 70 LLKQAMNL 72
           LK++M+L
Sbjct: 65 RLKRSMDL 72

BLAST of MELO3C029080 vs. NCBI nr
Match: KAG4109492.1 (hypothetical protein ERO13_1Z049369v2 [Gossypium hirsutum])

HSP 1 Score: 55.1 bits (131), Expect = 3.0e-04
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 10 LESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRNQ 69
          L+SF   +E+LV  S HE        YG       D Y D+D+KE LN+LPREI+N RNQ
Sbjct: 5  LQSFLGSQEKLVGSSAHEILSKRLRKYGLRYDDLYDRYYDLDIKEALNRLPREIVNARNQ 64

Query: 70 LLKQAMNL 72
           LK++M+L
Sbjct: 65 RLKRSMDL 72

BLAST of MELO3C029080 vs. ExPASy Swiss-Prot
Match: Q9SUU5 (Cytochrome b-c1 complex subunit 7-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR7-1 PE=1 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 9.0e-04
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0

Query: 9  LLESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRN 68
          LL++F  PK+  +     ++       YG       D Y  +D+KE +N+LPRE+++ RN
Sbjct: 4  LLKAFIDPKKNFLARMHMKAISTRLRRYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARN 63

Query: 69 QLLKQAMNL 72
          Q LK+AM+L
Sbjct: 64 QRLKRAMDL 72

BLAST of MELO3C029080 vs. ExPASy TrEMBL
Match: A0A7J8T192 (Cytochrome b-c1 complex subunit 7 OS=Gossypium davidsonii OX=34287 GN=Godav_000920 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.9e-04
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0

Query: 9  LLESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRN 68
          LL+SF  PK+  +     +S       YG       DPY D+D+KE LN+LPREI+N RN
Sbjct: 4  LLQSFLDPKKSWLAALHMKSLSKRLRKYGLRYDDLYDPYYDLDIKEALNRLPREIVNARN 63

Query: 69 QLLKQAMNL 72
          Q LK+AM+L
Sbjct: 64 QRLKRAMDL 72

BLAST of MELO3C029080 vs. ExPASy TrEMBL
Match: A0A7J8VYJ4 (Cytochrome b-c1 complex subunit 7 OS=Gossypium klotzschianum OX=34286 GN=Goklo_000896 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.9e-04
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 0

Query: 9  LLESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRN 68
          LL+SF  PK+  +     +S       YG       DPY D+D+KE LN+LPREI+N RN
Sbjct: 4  LLQSFLDPKKSWLAALHMKSLSKRLRKYGLRYDDLYDPYYDLDIKEALNRLPREIVNARN 63

Query: 69 QLLKQAMNL 72
          Q LK+AM+L
Sbjct: 64 QRLKRAMDL 72

BLAST of MELO3C029080 vs. ExPASy TrEMBL
Match: A0A7J6GTW6 (Cytochrome b-c1 complex subunit 7 OS=Cannabis sativa OX=3483 GN=F8388_021591 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.4e-04
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 9  LLESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRN 68
          +L+S   P++  +     +S   +  NYG       DPY D+DVKE LN+LPREI++ RN
Sbjct: 4  ILQSLLNPRKSWLAAQHMKSVSQSLRNYGLRYDDLYDPYYDLDVKEALNRLPREIVDARN 63

Query: 69 QLLKQAMNL 72
          Q LK+AM+L
Sbjct: 64 QRLKRAMDL 72

BLAST of MELO3C029080 vs. ExPASy TrEMBL
Match: A0A5C7HYE3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_013480 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.4e-04
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 10 LESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRNQ 69
          L+SF  PK+  +     ++      NYG       DPY D+D+KE LN+LPREI++ RNQ
Sbjct: 5  LQSFIDPKKNWLAAQHMKTISKRLKNYGLRYDDLYDPYYDLDIKEALNRLPREIVDARNQ 64

Query: 70 LLKQAMNL 72
           LK+AM+L
Sbjct: 65 RLKRAMDL 72

BLAST of MELO3C029080 vs. ExPASy TrEMBL
Match: A0A0D2VC65 (Cytochrome b-c1 complex subunit 7 OS=Gossypium raimondii OX=29730 GN=B456_013G110700 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.4e-04
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 0

Query: 10 LESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRNQ 69
          L+SF  PK+  +     +S       YG       DPY D+D+KE LN+LPREI+N RNQ
Sbjct: 5  LQSFLDPKKSWLAALHMKSLSKRLRKYGLRYDDLYDPYYDLDIKEALNRLPREIVNARNQ 64

Query: 70 LLKQAMNL 72
           LK+AM+L
Sbjct: 65 RLKRAMDL 72

BLAST of MELO3C029080 vs. TAIR 10
Match: AT4G32470.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 43.9 bits (102), Expect = 6.4e-05
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0

Query: 9  LLESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRN 68
          LL++F  PK+  +     ++       YG       D Y  +D+KE +N+LPRE+++ RN
Sbjct: 4  LLKAFIDPKKNFLARMHMKAISTRLRRYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARN 63

Query: 69 QLLKQAMNL 72
          Q LK+AM+L
Sbjct: 64 QRLKRAMDL 72

BLAST of MELO3C029080 vs. TAIR 10
Match: AT4G32470.2 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 43.9 bits (102), Expect = 6.4e-05
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0

Query: 9  LLESFSFPKEELVHLSLHESTHPTACNYG------NDPYDDIDVKETLNQLPREILNMRN 68
          LL++F  PK+  +     ++       YG       D Y  +D+KE +N+LPRE+++ RN
Sbjct: 4  LLKAFIDPKKNFLARMHMKAISTRLRRYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARN 63

Query: 69 QLLKQAMNL 72
          Q LK+AM+L
Sbjct: 64 QRLKRAMDL 72

BLAST of MELO3C029080 vs. TAIR 10
Match: AT5G25450.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 43.5 bits (101), Expect = 8.3e-05
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0

Query: 39 DPYDDIDVKETLNQLPREILNMRNQLLKQAMNL 72
          DP  D+D+KE LN+LPREI++ RNQ L +AM+L
Sbjct: 40 DPLYDLDIKEALNRLPREIVDARNQRLMRAMDL 72

BLAST of MELO3C029080 vs. TAIR 10
Match: AT5G25450.2 (Cytochrome bd ubiquinol oxidase, 14kDa subunit )

HSP 1 Score: 43.5 bits (101), Expect = 8.3e-05
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0

Query: 39 DPYDDIDVKETLNQLPREILNMRNQLLKQAMNL 72
          DP  D+D+KE LN+LPREI++ RNQ L +AM+L
Sbjct: 40 DPLYDLDIKEALNRLPREIVDARNQRLMRAMDL 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8646126.11.6e-1071.93hypothetical protein Csa_023819, partial [Cucumis sativus][more]
XP_040966316.13.0e-0447.06cytochrome b-c1 complex subunit 7-2, mitochondrial isoform X1 [Gossypium hirsutu... [more]
XP_016742674.23.0e-0447.06cytochrome b-c1 complex subunit 7-2, mitochondrial isoform X2 [Gossypium hirsutu... [more]
KAG4109490.13.0e-0447.06hypothetical protein ERO13_1Z049369v2 [Gossypium hirsutum][more]
KAG4109492.13.0e-0447.06hypothetical protein ERO13_1Z049369v2 [Gossypium hirsutum][more]
Match NameE-valueIdentityDescription
Q9SUU59.0e-0436.23Cytochrome b-c1 complex subunit 7-1, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
Match NameE-valueIdentityDescription
A0A7J8T1921.9e-0446.38Cytochrome b-c1 complex subunit 7 OS=Gossypium davidsonii OX=34287 GN=Godav_0009... [more]
A0A7J8VYJ41.9e-0446.38Cytochrome b-c1 complex subunit 7 OS=Gossypium klotzschianum OX=34286 GN=Goklo_0... [more]
A0A7J6GTW65.4e-0443.48Cytochrome b-c1 complex subunit 7 OS=Cannabis sativa OX=3483 GN=F8388_021591 PE=... [more]
A0A5C7HYE35.4e-0444.12Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_013480 PE=3 SV=1[more]
A0A0D2VC655.4e-0445.59Cytochrome b-c1 complex subunit 7 OS=Gossypium raimondii OX=29730 GN=B456_013G11... [more]
Match NameE-valueIdentityDescription
AT4G32470.16.4e-0536.23Cytochrome bd ubiquinol oxidase, 14kDa subunit [more]
AT4G32470.26.4e-0536.23Cytochrome bd ubiquinol oxidase, 14kDa subunit [more]
AT5G25450.18.3e-0560.61Cytochrome bd ubiquinol oxidase, 14kDa subunit [more]
AT5G25450.28.3e-0560.61Cytochrome bd ubiquinol oxidase, 14kDa subunit [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029080.1MELO3C029080.1mRNA