MELO3C029055 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029055
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein mlo2-like isoform X2
Location	chr01: 17248362 .. 17251241 (+)
RNA-Seq Expression	MELO3C029055
Synteny	MELO3C029055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGTAAAAGAGAAGGTCCGGCGAACGGAATCGATCTTGGAACCGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTAAGTTCTTTCATTTCTTAATCGCCCGCTTTAGATTGATTAAGCATGTGCTTACTGCTTTGTTTCATCTTCTGCAACTTTAGGGAGGATAACCTGATGCTTGCTTGTTTTATTATTGTATTTTTGTAGCTTTTGTAGCTTTTGTTTGGAGATGGTGTCATCCACCTCCACCTTTTGTAGGATTTTCTATTTCTGTACGCTATTCTTTTATGTACCTAGGCTATGTTTGGGGCAGATGGTTTTTCTTGGAAATTTAACAATAGGCACTTTGTTCATGGTTATTGTTATGACATTATTAGGGTAATGTATCAAAATGTGAACAGCAATTCCGAGATGAAAAGACTAGTTTCTGATTCTTCAAACTCCCATATATGTTATACAGGTTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCGAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTCCTCGGAAAATGAAGCTAAGAAGTCCTTGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTAAGGGATATTAGTTCATCTTTATATTTTTGGTATACTGCAAAAATGGCATTATATAGAATCAAATTTAGAGGAGCTGAACAACATTTGGATTTTGGTTGGAAGTGGAAATCGATACTTTTCTTTTTTTCCCCTAAAAAATTTGAAACAGAGTTTACAATTTACTTAGCCTCACAAAGTTTTACTTCTTGAAAAAGGAAAAACAAAAAAGGAAATTCTTTTCTAACCATGGGGCCTTAATTTCTATCACAAAATTCAATTTTACGAATTCCTTCATGGTTAGAACTGAGAGTTGATGATGGGGTGCTATATTATATTACACATTTACCCATCATTTTGAGGTAGGAAAGGTATAAATATGGTGGATGACTACATCTCGATGCACGCTGACGGTAGTTGAAAGAGATTCTCACAGCTCCTCTGAGTTTTTAGGTTGAATGAAACAACTTTATATACTTTCACATCTTGTATAGGTGGTTACACTGTATCAAGAAGCTAACATGTGTAGTTTGTGGAATTGATAGTTATTTTATGATTTGGGCTCTTGTGATGCATATTGTTAATGGTTACTATTTCCGGTTTGTAAATAAATAAAGAAGTGTATATGGGACAAGATTTTGAAAGACTTTGTTCGGTTTGTAAATAAATAAAATGCTGCTACTGATGATTAGTTCTTAAAAAAAATTCAAGCAAGTGATATGAAATCTTTTTTGAGTTTCAAATTTATTTTGGTTGGAAGTGTGGGTTTCTTTACTCTGTTTAGTCGAAGATCGTAATTAAGAGTTATGCCTTCTTGTGTGTTCTCCCATCTACTATGTTTTCTCAACAATAATATCCTGGTATATGATAGTTTCTTAAAAAACATAGCGCACCATGGATTTACTACGTTTCGTTTAGTTTTTCTTATTGTTTTATTTCTTATCCAAATTTGAAGGTTGCTGCAGAATAATAACATTTCCAGTCCAATTCCCATTGAACTTCGAACTGTCCCATTGCTTCAAACATTAGATCTCTCAAACAACCGGTTCTCTTGTCCGATACCAACATCTTTTGCTCAGCTAAACGGTCTACACTATCTGTAAGTGTTTAAGAATTTTCGTCGGTCATTTTTTCTGTTTGGGTTTCTGCAATATAGAGGATGTAAAAAACACCTCAAAATTTTCACTTTTTCCAGAGATTTCATCATTTTACATGTGTGACTCTAGTGAAGTTTCAATTTCTAAAGTTGGATTTTTTGATATTATTTAATGCTCTTTATTCTAAATTTTTCTTAGAGGTCATGTACTTGATGCATAAGTTGCTACTTGTCTGTTTGCTCCTTTTCTGTTATTTATAAAAATAACTTGCTTTTTCTTACTTTGTTTTGTAATGAGTAGTAGACTGAACAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCAAGACAATAAGGTTCATCTCATGATCCCTAATTTCTTGCTGGAAATGTATTTGCAGAATAGTTCATATAAGAAGTAAGAACACTTAAATTGTCTTTATTTGGCAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAGAAGGTCGTTAAAAAAGTAACTGGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATACTGTAAGATCCAGCTGAAAACTCTCCTCTCTTCTCTTCTTTGTAAATTTAAATAATATGATGCAAGGAAGAGTGTTCAGGGCAGTTATTTATTTTACTCTATTAGTTTAATGATTTTGTGTACTGTTAAGTGTTAAGGAAGAAGCAATTCGACCATGAGAAATGATTCTGTATATAAAAATGTTTGGGAGATAGACATTTGAATGTGTACAATGAAAGTTTCTACATATTCCAAAAATTATTTTGATTTATACATTTCTTTATGAGTGGGTTTGAATGTTTTTGTAATTGGGTTTGGGTATGTTTATGGTTTTCTTCTAGTGATAGAACTGCTTACTACTATGCTTCACATGTTTGTTTGTAATAATGGAGATGATAGAAATCAGGACTTATCAGATTAAATGGTTTATTTTGATATTGTTTGTAGAATGATTGAAGTCATAAGATTGAAAGCTAAGCGATTGTGTAGATAGCCAGACGATCGTTGAAGGTTGAAGACTGAGAAGGCGTTTAGAATTTCTTATTTAAGTCTTGTATTAGGATCTTGTTTCATGTACTATTGTAGAATGTATATATAAACACAATATTTAGTTTTCATTTCGTGTATACAAATTTAAAAGATAAA

mRNA sequence

ATGGCCGGTAAAAGAGAAGGTCCGGCGAACGGAATCGATCTTGGAACCGATGACCTTATGGTTCAGTGTGAGCTTTTGTTTGGAGATGGTGTCATCCACCTCCACCTTTTGTAGGATTTTCTATTTCTGTACGCTATTCTTTTATTAGACTGAACAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAGAAGGTCGTTAAAAAAGTAACTGGAGCAAAGTTCGATGATTTGGTTCATGCCATTGATACTAATGATTGAAGTCATAAGATTGAAAGCTAAGCGATTGTGTAGATAGCCAGACGATCGTTGAAGGTTGAAGACTGAGAAGGCGTTTAGAATTTCTTATTTAAGTCTTGTATTAGGATCTTGTTTCATGTACTATTGTAGAATGTATATATAAACACAATATTTAGTTTTCATTTCGTGTATACAAATTTAAAAGATAAA

Coding sequence (CDS)

ATGGCCGGTAAAAGAGAAGGTCCGGCGAACGGAATCGATCTTGGAACCGATGACCTTATGGTTCAGTGTGAGCTTTTGTTTGGAGATGGTGTCATCCACCTCCACCTTTTGTAG

Protein sequence

MAGKREGPANGIDLGTDDLMVQCELLFGDGVIHLHLL

Homology

[Close]

BLAST of MELO3C029055 vs. NCBI nr
Match: KAA0052826.1 (protein mlo2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 2.0e-04
Identity = 29/37 (78.38%), Postives = 29/37 (78.38%), Query Frame = 0


Query: 1  MAGKREGPANGIDLGTDDLMVQCELLFGDGVIHLHLL 38
          M GK EGPA  IDLGTDDLM    LLFGDGVIHLHLL
Sbjct: 1  MTGKGEGPAIEIDLGTDDLM----LLFGDGVIHLHLL 33

[Close]

BLAST of MELO3C029055 vs. ExPASy TrEMBL
Match: A0A5A7UF44 (Protein mlo2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold773G00220 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.6e-05
Identity = 29/37 (78.38%), Postives = 29/37 (78.38%), Query Frame = 0


Query: 1  MAGKREGPANGIDLGTDDLMVQCELLFGDGVIHLHLL 38
          M GK EGPA  IDLGTDDLM    LLFGDGVIHLHLL
Sbjct: 1  MTGKGEGPAIEIDLGTDDLM----LLFGDGVIHLHLL 33

The following BLAST results are available for this feature:

BLAST of MELO3C029055 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052826.1	2.0e-04	78.38	protein mlo2-like isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C029055 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C029055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UF44	9.6e-05	78.38	Protein mlo2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of MELO3C029055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029055.1	MELO3C029055.1	mRNA