MELO3C029052 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029052
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr11: 24356959 .. 24357773 (+)
RNA-Seq Expression	MELO3C029052
Synteny	MELO3C029052

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACAGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCGGGAGGGTCATCATCTGTGGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAAATATTTCATGTTCTTTTTTCTAACTTTATATGTTATTATCGATTTATTGAGTAGAGTCTTCTTCTCAACAAGCGACTCTAACTACTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCAAGACATTTCCCGTCCGCTGTCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTAAATGCGCTACACATTTATATATGATTTCATTTGAAACATATCTAACTTTAACCAATCTAATGTGTTATGTTTGTAATGTGTAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCGATGAACAGGTTTGTTGAGCATCAAATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGACACTTCCTCTGCGACCATTATATCAGTCGTGCATTCCAGGTATTTGTCATCATTAATTACGATAACAAGTTTTAATATGTATATGAAATAAACAATATAATTGTTTTAATGCAGAAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAAGG

mRNA sequence

ATGGAGACAGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCGGGAGGGTCATCATCTGTGGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAAATATTTCATGTTCTTTTTTCTAACTTTATATGTTATTATCGATTTATTGAGTAGAGTCTTCTTCTCAACAAGCGACTCTAACTACTAGTTAGAGCGCCAAGACATTTCCCGTCCGCTGTCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCGATGAACAGGTTTGTTGAGCATCAAATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGAAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAAGG

Coding sequence (CDS)

ATGAACAGGTTTGTTGAGCATCAAATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGAAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAA

Protein sequence

MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERK

Homology

[Close]

BLAST of MELO3C029052 vs. NCBI nr
Match: KAA0032480.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 4.2e-33
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNAL+QSRTNKAARQKQPYNHSS
Sbjct: 173 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 232

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAERK
Sbjct: 233 GSKSFLQRQYELAERK 248

[Close]

BLAST of MELO3C029052 vs. NCBI nr
Match: TYK14211.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 4.2e-33
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNAL+QSRTNKAARQKQPYNHSS
Sbjct: 121 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 180

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAERK
Sbjct: 181 GSKSFLQRQYELAERK 196

[Close]

BLAST of MELO3C029052 vs. NCBI nr
Match: KAA0025427.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04756.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 9.3e-33
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNAL+QSRTNKAARQKQPYNHSS
Sbjct: 114 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 173

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAER+
Sbjct: 174 GSKSFLQRQYELAERR 189

[Close]

BLAST of MELO3C029052 vs. NCBI nr
Match: KAA0042203.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEF+ADCHRHFKKYSDPEEARANPPNAL+QSRTNKAARQKQPYNHSS
Sbjct: 107 MNRFVEHQMLTTFKEFQADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 166

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAERK
Sbjct: 167 GSKSFLQRQYELAERK 182

[Close]

BLAST of MELO3C029052 vs. NCBI nr
Match: KAA0053102.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03318.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNAL+QSRTNKA RQKQPYNHSS
Sbjct: 254 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKATRQKQPYNHSS 313

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAERK
Sbjct: 314 GSKSFLQRQYELAERK 329

[Close]

BLAST of MELO3C029052 vs. ExPASy TrEMBL
Match: A0A5A7SNU6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold500G00040 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNAL+QSRTNKAARQKQPYNHSS
Sbjct: 173 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 232

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAERK
Sbjct: 233 GSKSFLQRQYELAERK 248

[Close]

BLAST of MELO3C029052 vs. ExPASy TrEMBL
Match: A0A5D3CQY3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00370 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNAL+QSRTNKAARQKQPYNHSS
Sbjct: 121 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 180

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAERK
Sbjct: 181 GSKSFLQRQYELAERK 196

[Close]

BLAST of MELO3C029052 vs. ExPASy TrEMBL
Match: A0A5D3C2U8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00580 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNAL+QSRTNKAARQKQPYNHSS
Sbjct: 114 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 173

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAER+
Sbjct: 174 GSKSFLQRQYELAERR 189

[Close]

BLAST of MELO3C029052 vs. ExPASy TrEMBL
Match: A0A5D3BWI7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold566G00080 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.9e-33
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNAL+QSRTNKA RQKQPYNHSS
Sbjct: 254 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKATRQKQPYNHSS 313

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAERK
Sbjct: 314 GSKSFLQRQYELAERK 329

[Close]

BLAST of MELO3C029052 vs. ExPASy TrEMBL
Match: A0A5A7TG53 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007110 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.9e-33
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALKQSRTNKAARQKQPYNHSS 60
           MNRFVEHQMLTTFKEF+ADCHRHFKKYSDPEEARANPPNAL+QSRTNKAARQKQPYNHSS
Sbjct: 107 MNRFVEHQMLTTFKEFQADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 166

Query: 61  GSKSFLQRQYELAERK 77
           GSKSFLQRQYELAERK
Sbjct: 167 GSKSFLQRQYELAERK 182

The following BLAST results are available for this feature:

BLAST of MELO3C029052 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C029052 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032480.1	4.2e-33	98.68	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK14211.1	4.2e-33	98.68	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0025427.1	9.3e-33	97.37	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04756.1 CACTA en-...	[more]
KAA0042203.1	1.2e-32	97.37	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0053102.1	1.2e-32	97.37	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03318.1 CACTA en-...	[more]

BLAST of MELO3C029052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNU6	2.0e-33	98.68	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CQY3	2.0e-33	98.68	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3C2U8	4.5e-33	97.37	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BWI7	5.9e-33	97.37	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TG53	5.9e-33	97.37	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MELO3C029052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 38..76 e-value: 9.6E-7 score: 29.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029052.1	MELO3C029052.1	mRNA